FFCP PHASE1:Hg19::chr1:236141209..236141231,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:236141209..236141231,- | |||
|coexpression_cluster_id=C932 | |||
|description=CAGE_peak_at_chr1:236141209..236141231,- | |description=CAGE_peak_at_chr1:236141209..236141231,- | ||
|id=chr1:236141209..236141231,- | |id=chr1:236141209..236141231,- | ||
|ontology_enrichment_celltype=CL:0000057!1.62e-15!75;CL:0000055!6.41e-15!180;CL:0002620!8.78e-09!23 | |ontology_enrichment_celltype=CL:0000057!1.62e-15!75;CL:0000055!6.41e-15!180;CL:0002620!8.78e-09!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;6.44e-08;23!CL:0002138;1.21e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.04e-11,76;CL:0002620,6.92e-08,23;CL:0005020,1.40e-07,6;CL:0002138,1.40e-07,6;CL:0005022,1.40e-07,6;CL:0000115,2.46e-07,36;CL:0000048,2.49e-07,427;CL:0000723,6.62e-07,433 | |||
|ontology_enrichment_development_v019=CL:0005022;1.21e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;3.40e-07;5!DOID:450;3.40e-07;5!DOID:66;3.40e-07;5!DOID:423;3.40e-07;5!DOID:0080000;3.40e-07;5!DOID:11722;3.40e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.30e-07,5;DOID:450,3.30e-07,5;DOID:66,3.30e-07,5;DOID:423,3.30e-07,5;DOID:0080000,3.30e-07,5;DOID:11722,3.30e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0005256!3.68e-10!143;UBERON:0000468!1.40e-08!659;UBERON:0003102!7.73e-08!95;UBERON:0001013!4.19e-07!14;UBERON:0000490!4.40e-07!138;UBERON:0000475!6.60e-07!365;UBERON:0002100!7.24e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;8.26e-08;19!UBERON:0006925;8.26e-08;19!UBERON:0004905;9.04e-08;8!UBERON:0000982;9.04e-08;8!UBERON:0004770;9.04e-08;8!UBERON:0001473;1.59e-07;8!UBERON:0004536;1.59e-07;8!UBERON:0006558;1.59e-07;8!UBERON:0002465;2.44e-07;10!UBERON:0011135;3.97e-07;5!UBERON:0002216;3.97e-07;5!UBERON:0011134;3.97e-07;5!UBERON:0002209;3.97e-07;5!UBERON:0002213;3.97e-07;5!UBERON:0007844;3.97e-07;5!UBERON:0011138;3.97e-07;5!UBERON:0001130;3.97e-07;5!UBERON:0001066;3.97e-07;5!UBERON:0001468;3.97e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,2.62e-08,46;UBERON:0002416,2.62e-08,46;UBERON:0004905,5.40e-08,8;UBERON:0000982,5.40e-08,8;UBERON:0004770,5.40e-08,8;UBERON:0002107,7.25e-08,19;UBERON:0006925,7.25e-08,19;UBERON:0008836,7.25e-08,19;UBERON:0003104,9.00e-08,160;UBERON:0009142,9.00e-08,160;UBERON:0002465,1.97e-07,10;UBERON:0001473,1.99e-07,8;UBERON:0004536,1.99e-07,8;UBERON:0006558,1.99e-07,8;UBERON:0011135,2.46e-07,5;UBERON:0002216,2.46e-07,5;UBERON:0011134,2.46e-07,5;UBERON:0002209,2.46e-07,5;UBERON:0002213,2.46e-07,5;UBERON:0005856,2.46e-07,5;UBERON:0005866,2.46e-07,5;UBERON:0005863,2.46e-07,5;UBERON:0007844,2.46e-07,5;UBERON:0011138,2.46e-07,5;UBERON:0001130,2.46e-07,5;UBERON:0001066,2.46e-07,5;UBERON:0001468,2.46e-07,5;UBERON:0005256,2.70e-07,122;UBERON:0003102,5.01e-07,99 | |||
|phase1_expression=1.63510541343501,11.7755288140041,5.3562673556469,1.0007329835313,8.04529969969118,0.872338524100369,5.06599756336621,1.89515962028049,5.22371256399677,0,0,0,0.263766978228454,2.10402800032079,1.65698687863958,0,1.20538905604795,2.19093027116212,0,0.369363174230364,0.408001382488506,0.313454721478088,0,0.821246550437305,0.125542639594803,0.916960868975415,0,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0.257575567634187,0,0.377875943688809,0,0.232429036905685,0.411167888021826,0.309706370895104,0.28769239232215,0,0,0,0.645484683583826,1.35426486594342,0,0,0.224723484445085,0.612167784741805,0,0,0,0,0.426224750532694,0.870627715885752,0,0,0,0,0.217188844705117,0.605399502633369,1.10483290796269,0.316462387440884,0.211255286311942,0,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,0.767175371061182,1.0843174571537,0,1.15877215168659,0,0,0.283604451492204,0,0.175669571386252,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0.56530794192401,0,1.6507082516404,0.626984899610432,1.29208379584664,1.06729878806013,2.34304428935269,2.41697590265488,0,7.07779966889692,0.367663080345869,0.81014194788176,1.42879565254528,0.22452937262617,0.225222960966644,1.53316637465883,0,0.366403487860815,0,0,0,0.993943903390637,0.379891534993739,0,2.0078563452417,1.77334191099179,0,0,1.48000529050296,1.24484414159907,0.808264032418128,1.9615428373615,6.65972681637698,4.03323147135999,1.40592859100278,0.624320153660641,0,2.83952493048422,1.29177948508141,0.647491777472526,0.561803226808994,0.61246251376468,1.10550885580591,2.06651562351531,0,0.989067717114227,0.910161361938026,2.15585442544872,0.505008341862199,2.75260743718321,0.277064115484183,0,0.30648779579902,0.600952235626387,0.453728732640084,3.94657198515496,2.34913127700424,2.7551147150743,2.40072876867522,1.13357782162283,2.06112432036503,1.48893485065272,1.0126579934476,0.584622030967192,1.7670364197088,0.460249493211497,1.61646056818812,2.4850671476163,1.0075209822764,0.508681776931463,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0.310983165046111,0.504641701751257,0,0,1.28648187638577,0,4.64367928031979,2.16563844500876,0,0,0,0,0,0,0,0,0,4.42893272774789,2.80483547606892,0,0,3.80265104465493,1.96565443335525,0.590789906681404,0,0.368965315629341,1.3725424823882,0,0,0,0,0.651616610620649,3.11980435583874,0,0.115930404975077,0.117408694235822,1.73239737313289,3.70388410061289,2.28304982681518,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.317489471460845,0,0,0,0.514137463516618,0,0.285826432630578,0.784917590417525,2.1798003441664,1.24675085895615,0,14.3062578340753,5.071816515336,4.78688609852767,1.04007436911366,0,1.41849132023278,0.266422179016099,11.1522835053355,36.8982691666181,0,0.65147236858747,3.19852753868291,0,0,0,0.099972991182057,0,0.502257091432126,0,1.4377491329495,1.14861935834114,0,0.723906533337896,3.08214483825575,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,5.76650011079957,4.50153468953709,1.62759014219841,2.28767947683888,2.14114786556594,1.10391690523754,1.17141414992713,0.300946099727719,0,1.03473071292505,0,0.737476674166813,0.521301686808497,4.11182430671755,7.89229874764969,0.206768026122887,0.215714200818617,0,0,0,0,1.24053903909388,0.767309866440312,3.36792113319688,1.79394808957981,0,0.965123526861645,1.48418066444991,2.46735510084249,0.355123450626254,0.0821271560138091,2.59627214591811,0.697262270759755,0.483437798366489,0.601519410909855,0.276242966807689,1.60740227430449,3.27764102412091,2.22911505431021,0,0.308061348417659,0,0,0.211103257785751,1.13733384070897,1.19065593693561,1.0795795805107,12.3381802152231,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.412164046590889,0.54941678891006,0.082509499920588,0,0,1.6068392984416,0.193341436584244,1.23238893691716,0.767518373630648,0.413509717453592,1.82614416276065,1.59518363305651,0.767039646744908,0.534192213880424,0,0,0,0,0.464845549297286,0.94443704049192,0,0.616067160352178,0.532306030317022,0,0,0,0.372158369359667,0.632758849437452,0,0,2.1396949401696,0,0.78494864019923,0.539617372749944,1.09814811894422,1.29593642580255,0.202182481573316,0,0,0.48763373908959,2.68084838594413,0,2.32049849393576,7.07027159768564,0,0,0.66343897524122,0.438450885253763,1.73632660280006,0.655894752046633,0.202910376962704,0.30982349809975,0.281695602532241,0.573645408816206,0.196498082026242,0,0,1.47775344708365,2.30506425071931,0.379473173765715,1.74967360122491,0,0,0,1.41215701165169,0.43050537267123,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0,0.425846237690326,0,0.307240764308458,0.894704431569664,1.00109485027145,0.19538809540204,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0.222617410045812,0,0,0.796991953004279,0,0,0.102268682502155,0,1.86623752597084,0,0,0,1.38100767891707,0,0,0,0.0927680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|phase1_expression=1.63510541343501,11.7755288140041,5.3562673556469,1.0007329835313,8.04529969969118,0.872338524100369,5.06599756336621,1.89515962028049,5.22371256399677,0,0,0,0.263766978228454,2.10402800032079,1.65698687863958,0,1.20538905604795,2.19093027116212,0,0.369363174230364,0.408001382488506,0.313454721478088,0,0.821246550437305,0.125542639594803,0.916960868975415,0,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0.257575567634187,0,0.377875943688809,0,0.232429036905685,0.411167888021826,0.309706370895104,0.28769239232215,0,0,0,0.645484683583826,1.35426486594342,0,0,0.224723484445085,0.612167784741805,0,0,0,0,0.426224750532694,0.870627715885752,0,0,0,0,0.217188844705117,0.605399502633369,1.10483290796269,0.316462387440884,0.211255286311942,0,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,0.767175371061182,1.0843174571537,0,1.15877215168659,0,0,0.283604451492204,0,0.175669571386252,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0.56530794192401,0,1.6507082516404,0.626984899610432,1.29208379584664,1.06729878806013,2.34304428935269,2.41697590265488,0,7.07779966889692,0.367663080345869,0.81014194788176,1.42879565254528,0.22452937262617,0.225222960966644,1.53316637465883,0,0.366403487860815,0,0,0,0.993943903390637,0.379891534993739,0,2.0078563452417,1.77334191099179,0,0,1.48000529050296,1.24484414159907,0.808264032418128,1.9615428373615,6.65972681637698,4.03323147135999,1.40592859100278,0.624320153660641,0,2.83952493048422,1.29177948508141,0.647491777472526,0.561803226808994,0.61246251376468,1.10550885580591,2.06651562351531,0,0.989067717114227,0.910161361938026,2.15585442544872,0.505008341862199,2.75260743718321,0.277064115484183,0,0.30648779579902,0.600952235626387,0.453728732640084,3.94657198515496,2.34913127700424,2.7551147150743,2.40072876867522,1.13357782162283,2.06112432036503,1.48893485065272,1.0126579934476,0.584622030967192,1.7670364197088,0.460249493211497,1.61646056818812,2.4850671476163,1.0075209822764,0.508681776931463,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0.310983165046111,0.504641701751257,0,0,1.28648187638577,0,4.64367928031979,2.16563844500876,0,0,0,0,0,0,0,0,0,4.42893272774789,2.80483547606892,0,0,3.80265104465493,1.96565443335525,0.590789906681404,0,0.368965315629341,1.3725424823882,0,0,0,0,0.651616610620649,3.11980435583874,0,0.115930404975077,0.117408694235822,1.73239737313289,3.70388410061289,2.28304982681518,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.317489471460845,0,0,0,0.514137463516618,0,0.285826432630578,0.784917590417525,2.1798003441664,1.24675085895615,0,14.3062578340753,5.071816515336,4.78688609852767,1.04007436911366,0,1.41849132023278,0.266422179016099,11.1522835053355,36.8982691666181,0,0.65147236858747,3.19852753868291,0,0,0,0.099972991182057,0,0.502257091432126,0,1.4377491329495,1.14861935834114,0,0.723906533337896,3.08214483825575,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,5.76650011079957,4.50153468953709,1.62759014219841,2.28767947683888,2.14114786556594,1.10391690523754,1.17141414992713,0.300946099727719,0,1.03473071292505,0,0.737476674166813,0.521301686808497,4.11182430671755,7.89229874764969,0.206768026122887,0.215714200818617,0,0,0,0,1.24053903909388,0.767309866440312,3.36792113319688,1.79394808957981,0,0.965123526861645,1.48418066444991,2.46735510084249,0.355123450626254,0.0821271560138091,2.59627214591811,0.697262270759755,0.483437798366489,0.601519410909855,0.276242966807689,1.60740227430449,3.27764102412091,2.22911505431021,0,0.308061348417659,0,0,0.211103257785751,1.13733384070897,1.19065593693561,1.0795795805107,12.3381802152231,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0.325378394664303,0.412164046590889,0.54941678891006,0.082509499920588,0,0,1.6068392984416,0.193341436584244,1.23238893691716,0.767518373630648,0.413509717453592,1.82614416276065,1.59518363305651,0.767039646744908,0.534192213880424,0,0,0,0,0.464845549297286,0.94443704049192,0,0.616067160352178,0.532306030317022,0,0,0,0.372158369359667,0.632758849437452,0,0,2.1396949401696,0,0.78494864019923,0.539617372749944,1.09814811894422,1.29593642580255,0.202182481573316,0,0,0.48763373908959,2.68084838594413,0,2.32049849393576,7.07027159768564,0,0,0.66343897524122,0.438450885253763,1.73632660280006,0.655894752046633,0.202910376962704,0.30982349809975,0.281695602532241,0.573645408816206,0.196498082026242,0,0,1.47775344708365,2.30506425071931,0.379473173765715,1.74967360122491,0,0,0,1.41215701165169,0.43050537267123,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0,0.425846237690326,0,0.307240764308458,0.894704431569664,1.00109485027145,0.19538809540204,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.140669416410513,0.222617410045812,0,0,0.796991953004279,0,0,0.102268682502155,0,1.86623752597084,0,0,0,1.38100767891707,0,0,0,0.0927680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| ||
|short_description=p@chr1:236141209..236141231,- | |short_description=p@chr1:236141209..236141231,- | ||
}} | }} |
Latest revision as of 05:25, 28 July 2015
Short description: | p@chr1:236141209..236141231, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:236141209..236141231, - |
Coexpression cluster: | C932_Mesenchymal_Adipocyte_Endothelial_Fibroblast_Renal_Pericytes_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.04e-11 | 76 |
skin fibroblast | 6.92e-08 | 23 |
lymphangioblast | 1.40e-07 | 6 |
endothelial cell of lymphatic vessel | 1.40e-07 | 6 |
vascular lymphangioblast | 1.40e-07 | 6 |
endothelial cell | 2.46e-07 | 36 |
multi fate stem cell | 2.49e-07 | 427 |
somatic stem cell | 6.62e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
integument | 2.62e-08 | 46 |
integumental system | 2.62e-08 | 46 |
articulation | 5.40e-08 | 8 |
skeletal joint | 5.40e-08 | 8 |
articular system | 5.40e-08 | 8 |
liver | 7.25e-08 | 19 |
digestive gland | 7.25e-08 | 19 |
liver bud | 7.25e-08 | 19 |
mesenchyme | 9.00e-08 | 160 |
entire embryonic mesenchyme | 9.00e-08 | 160 |
lymphoid system | 1.97e-07 | 10 |
lymphatic vessel | 1.99e-07 | 8 |
lymph vasculature | 1.99e-07 | 8 |
lymphatic part of lymphoid system | 1.99e-07 | 8 |
intervertebral cartilage | 2.46e-07 | 5 |
symphysis | 2.46e-07 | 5 |
nonsynovial joint | 2.46e-07 | 5 |
fibrous joint | 2.46e-07 | 5 |
cartilaginous joint | 2.46e-07 | 5 |
developing mesenchymal condensation | 2.46e-07 | 5 |
pre-cartilage condensation | 2.46e-07 | 5 |
cartilaginous condensation | 2.46e-07 | 5 |
cartilage element | 2.46e-07 | 5 |
post-cranial axial skeletal system | 2.46e-07 | 5 |
vertebral column | 2.46e-07 | 5 |
intervertebral disk | 2.46e-07 | 5 |
intervertebral joint | 2.46e-07 | 5 |
trunk mesenchyme | 2.70e-07 | 122 |
surface structure | 5.01e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.30e-07 | 5 |
myotonic disease | 3.30e-07 | 5 |
muscle tissue disease | 3.30e-07 | 5 |
myopathy | 3.30e-07 | 5 |
muscular disease | 3.30e-07 | 5 |
myotonic dystrophy | 3.30e-07 | 5 |