FFCP PHASE1:Hg19::chr1:2360084..2360095,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:2360084..2360095,+ | |||
|coexpression_cluster_id=C564 | |||
|description=CAGE_peak_at_chr1:2360084..2360095,+ | |||
|id=chr1:2360084..2360095,+ | |||
|ontology_enrichment_celltype=CL:0002076!6.68e-26!43;CL:0002368!3.31e-22!13;CL:0002159!1.23e-21!13;CL:0000223!4.46e-19!59;CL:0000622!1.59e-15!5;CL:0000066!3.13e-14!254;CL:0000244!4.18e-13!4;CL:0000731!4.18e-13!4;CL:0000154!7.23e-13!6;CL:0002202!6.35e-12!9;CL:0002632!6.35e-12!9;CL:0002077!1.60e-10!33;CL:0002623!3.08e-10!3;CL:0000068!4.41e-10!3;CL:0000069!4.41e-10!3;CL:0000307!4.41e-10!3;CL:0000377!4.41e-10!3;CL:0002251!5.42e-10!21;CL:0002328!6.31e-10!3;CL:0002166!8.23e-10!3;CL:0002621!1.28e-09!3;CL:0000362!2.27e-09!8;CL:0000150!1.98e-08!9;CL:0000240!2.76e-08!6;CL:0000311!2.76e-08!6;CL:0000079!2.76e-08!6;CL:0000237!2.76e-08!6;CL:0000036!2.76e-08!6;CL:0000357!2.76e-08!6;CL:0000114!2.76e-08!6;CL:0002327!3.16e-07!4;CL:0000575!3.60e-07!2;CL:0000317!5.62e-07!2;CL:1000448!5.62e-07!2;CL:0002308!5.62e-07!2;CL:0002140!5.62e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.01e-32;13!CL:0002076;2.98e-32;42!CL:0002159;2.42e-29;14!CL:0000622;3.41e-22;5!CL:0000244;1.22e-18;4!CL:0000731;1.22e-18;4!CL:0000154;1.87e-18;6!CL:0002202;2.36e-17;9!CL:0002632;2.36e-17;9!CL:0002251;6.52e-16;20!CL:0002623;2.53e-14;3!CL:0000307;3.69e-14;3!CL:0002328;6.12e-14;3!CL:0002077;1.07e-13;34!CL:0002166;1.13e-13;3!CL:0002621;1.89e-13;3!CL:0000150;3.27e-12;9!CL:0000362;5.73e-12;9!CL:0000240;9.46e-12;6!CL:0000311;9.46e-12;6!CL:0000079;9.46e-12;6!CL:0000237;9.46e-12;6!CL:0002327;3.81e-10;4!CL:0000575;6.47e-10;2!CL:0000317;1.28e-09;2!CL:1000448;1.28e-09;2!CL:0002308;1.28e-09;2!CL:0002140;1.28e-09;2!CL:0000312;1.70e-08;5!CL:0002231;9.01e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.10e-41,42;CL:0002368,1.19e-32,13;CL:0002159,2.18e-29,14;CL:0000223,2.39e-28,58;CL:0000066,2.22e-23,253;CL:0000622,3.34e-22,5;CL:0000244,1.28e-18,4;CL:0000731,1.28e-18,4;CL:0000154,1.83e-18,6;CL:0002202,2.46e-17,9;CL:0002632,2.46e-17,9;CL:0002251,5.68e-16,20;CL:0002077,7.13e-16,34;CL:0002623,2.21e-14,3;CL:0000068,3.77e-14,3;CL:0000069,3.77e-14,3;CL:0000307,3.77e-14,3;CL:0000377,3.77e-14,3;CL:0002328,6.39e-14,3;CL:0002166,9.47e-14,3;CL:0002621,1.81e-13,3;CL:0002321,2.20e-12,250;CL:0000150,3.23e-12,9;CL:0000362,5.41e-12,9;CL:0000240,8.34e-12,6;CL:0000311,8.34e-12,6;CL:0000079,8.34e-12,6;CL:0000237,8.34e-12,6;CL:0000036,8.34e-12,6;CL:0000357,8.34e-12,6;CL:0000114,8.34e-12,6;CL:0002327,4.12e-10,4;CL:0000575,7.39e-10,2;CL:0000317,1.42e-09,2;CL:1000448,1.42e-09,2;CL:0002308,1.42e-09,2;CL:0002140,1.42e-09,2;CL:0000312,1.49e-08,5;CL:0000221,4.33e-07,72;CL:0002231,9.83e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;5.18e-16;58!CL:0000377;3.69e-14;3!CL:0000357;9.46e-12;6!CL:0000114;9.46e-12;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!3.49e-17!72;UBERON:0004119!6.98e-13!169;UBERON:0000925!6.98e-13!169;UBERON:0006595!6.98e-13!169;UBERON:0000161!8.04e-13!35;UBERON:0007196!1.81e-12!14;UBERON:0001558!1.81e-12!14;UBERON:0000166!5.10e-12!21;UBERON:0003102!3.07e-11!95;UBERON:0000365!1.80e-10!5;UBERON:0003126!1.99e-10!7;UBERON:0001005!1.99e-10!7;UBERON:0000165!2.55e-10!28;UBERON:0000930!2.55e-10!28;UBERON:0000065!3.34e-10!53;UBERON:0004815!6.31e-10!3;UBERON:0002031!6.31e-10!3;UBERON:0001949!1.28e-09!3;UBERON:0005910!1.04e-08!6;UBERON:0001044!2.19e-08!6;UBERON:0003293!2.19e-08!6;UBERON:0003294!2.19e-08!6;UBERON:0010047!2.19e-08!6;UBERON:0000167!2.19e-08!6;UBERON:0005178!4.23e-08!34;UBERON:0002224!4.23e-08!34;UBERON:0005181!8.38e-08!35;UBERON:0002185!1.58e-07!4;UBERON:0001708!1.93e-07!4;UBERON:0001704!1.93e-07!4;UBERON:0001444!2.19e-07!48;UBERON:0001911!3.16e-07!4;UBERON:0005333!3.16e-07!4;UBERON:0008425!3.16e-07!4;UBERON:0005311!3.16e-07!4;UBERON:0001007!3.37e-07!155;UBERON:0001555!3.37e-07!155;UBERON:0007026!3.37e-07!155;UBERON:0003408!3.73e-07!10;UBERON:0001003!4.54e-07!14;UBERON:0007376!4.54e-07!14;UBERON:0007383!4.54e-07!14;UBERON:0002419!5.62e-07!2;UBERON:0007771!5.62e-07!2;UBERON:0003297!5.62e-07!2;UBERON:0001821!5.62e-07!2;UBERON:0003487!5.62e-07!2;UBERON:0001820!5.62e-07!2;UBERON:0005089!5.62e-07!2;UBERON:0005088!5.62e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;3.50e-22;12!UBERON:0000365;6.24e-15;5!UBERON:0004815;6.12e-14;3!UBERON:0002031;6.12e-14;3!UBERON:0001949;1.89e-13;3!UBERON:0000161;3.03e-13;19!UBERON:0000166;3.03e-13;19!UBERON:0005910;1.87e-12;6!UBERON:0000165;8.70e-11;28!UBERON:0001708;2.25e-10;4!UBERON:0008895;2.25e-10;4!UBERON:0007196;3.75e-10;15!UBERON:0001558;3.75e-10;15!UBERON:0001911;3.81e-10;4!UBERON:0002419;1.28e-09;2!UBERON:0007771;1.28e-09;2!UBERON:0003297;1.28e-09;2!UBERON:0001821;1.28e-09;2!UBERON:0003487;1.28e-09;2!UBERON:0001820;1.28e-09;2!UBERON:0002185;1.53e-08;5!UBERON:0011159;2.19e-08;5!UBERON:0005911;2.21e-08;36!UBERON:0003729;7.72e-08;13!UBERON:0001004;9.91e-08;65!UBERON:0002365;1.06e-07;31!UBERON:0002330;1.06e-07;31!UBERON:0010371;1.27e-07;31!UBERON:0001044;2.28e-07;6!UBERON:0003293;2.28e-07;6!UBERON:0003294;2.28e-07;6!UBERON:0010047;2.28e-07;6!UBERON:0003408;2.28e-07;6!UBERON:0000167;2.28e-07;6!UBERON:0001003;4.64e-07;15!UBERON:0007376;4.64e-07;15!UBERON:0000344;6.55e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,6.09e-15,74;UBERON:0000365,6.47e-15,5;UBERON:0003102,3.32e-14,99;UBERON:0004815,6.39e-14,3;UBERON:0002031,6.39e-14,3;UBERON:0001949,1.81e-13,3;UBERON:0005910,1.93e-12,6;UBERON:0004119,2.74e-12,160;UBERON:0000925,2.74e-12,160;UBERON:0006595,2.74e-12,160;UBERON:0000153,4.01e-12,62;UBERON:0007811,4.01e-12,62;UBERON:0000033,6.11e-12,56;UBERON:0000166,2.81e-11,22;UBERON:0001708,1.98e-10,4;UBERON:0008895,1.98e-10,4;UBERON:0000165,2.28e-10,29;UBERON:0000930,2.28e-10,29;UBERON:0007196,3.85e-10,15;UBERON:0001558,3.85e-10,15;UBERON:0001911,4.12e-10,4;UBERON:0005333,4.12e-10,4;UBERON:0008425,4.12e-10,4;UBERON:0005311,4.12e-10,4;UBERON:0000161,4.58e-10,36;UBERON:0002419,1.42e-09,2;UBERON:0007771,1.42e-09,2;UBERON:0003297,1.42e-09,2;UBERON:0001821,1.42e-09,2;UBERON:0003487,1.42e-09,2;UBERON:0001820,1.42e-09,2;UBERON:0005089,1.42e-09,2;UBERON:0005088,1.42e-09,2;UBERON:0002185,1.57e-08,5;UBERON:0011159,1.98e-08,5;UBERON:0001444,2.08e-08,49;UBERON:0003729,7.54e-08,13;UBERON:0002365,9.31e-08,31;UBERON:0002330,9.31e-08,31;UBERON:0000065,1.07e-07,54;UBERON:0001044,2.14e-07,6;UBERON:0003293,2.14e-07,6;UBERON:0003294,2.14e-07,6;UBERON:0010047,2.14e-07,6;UBERON:0000167,2.14e-07,6;UBERON:0005157,2.41e-07,47;UBERON:0010188,4.32e-07,6;UBERON:0002539,4.32e-07,6;UBERON:0008816,4.32e-07,6;UBERON:0001003,4.49e-07,15;UBERON:0007376,4.49e-07,15;UBERON:0007383,4.49e-07,15;UBERON:0000344,6.67e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.51652734687356,5.4217065380085,7.02532619316897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.10738220731355,4.07862887062872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66922267785295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47869535693934,7.63689137654337,3.72845974005705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.67027254728142,7.86812272803337,2.91534019993729,2.59247646443883,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,11.2548025893236,4.82035330624114,4.20925056703387,4.06887513919547,4.60059214998253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.21316822788541,5.24861636934609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16838984196555,4.55042172225565,0,0,0,0,0,0,0,0,0,4.13212288402445,8.26417289669956,33.0516925360973,8.09262246844399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97576935775941,0,0,3.46399605811843,9.38423185750102,10.8890984861323,0,12.0541504347944,8.42357378338128,7.53831261012349,6.43225520579487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,1.81250867562184,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391969589657511,0,0.17472666824203,0,0,0,0,0.484945082442097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.71388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74988244777264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.57433686281389,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86480665151949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,7.66699807403236,13.657478167516,5.53007729451273,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,2.11736923029415,0,0,0.917458566809082,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,1.49263787330687,0.23806443146374,0,0.124149428591716,0,0,0,0.653150243690884,0,1.01028079521881,0.860666464712116,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:2360084..2360095,+ | |||
}} |
Latest revision as of 05:22, 28 July 2015
Short description: | p@chr1:2360084..2360095, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:2360084..2360095, + |
Coexpression cluster: | C564_Small_salivary_Corneal_Bronchial_Urothelial_Keratinocyte_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data