FFCP PHASE1:Hg19::chr1:22206973..22206987,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:22206973..22206987,- | |||
|coexpression_cluster_id=C547 | |coexpression_cluster_id=C547 | ||
|description=CAGE_peak_at_chr1:22206973..22206987,- | |description=CAGE_peak_at_chr1:22206973..22206987,- | ||
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|ontology_enrichment_celltype=CL:0002139!2.30e-10!24;CL:0000115!2.66e-10!35;CL:0000213!3.35e-09!57;CL:0000215!3.35e-09!57;CL:0002078!3.68e-09!44;CL:0000057!2.59e-08!75;CL:0000222!6.43e-08!119;CL:0002334!7.36e-08!12;CL:0000055!2.02e-07!180 | |ontology_enrichment_celltype=CL:0002139!2.30e-10!24;CL:0000115!2.66e-10!35;CL:0000213!3.35e-09!57;CL:0000215!3.35e-09!57;CL:0002078!3.68e-09!44;CL:0000057!2.59e-08!75;CL:0000222!6.43e-08!119;CL:0002334!7.36e-08!12;CL:0000055!2.02e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000115;3.36e-15;36!CL:0002139;5.36e-14;24!CL:0002078;2.13e-13;45!CL:0002138;5.96e-12;6!CL:0002188;8.16e-09;5!CL:0000213;9.65e-09;58!CL:0000215;9.65e-09;58!CL:0002144;4.03e-07;3 | |ontology_enrichment_celltype_v019=CL:0000115;3.36e-15;36!CL:0002139;5.36e-14;24!CL:0002078;2.13e-13;45!CL:0002138;5.96e-12;6!CL:0002188;8.16e-09;5!CL:0000213;9.65e-09;58!CL:0000215;9.65e-09;58!CL:0002144;4.03e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.49e-18,36;CL:0002078,1.84e-16,45;CL:0000222,2.80e-14,121;CL:0000213,4.65e-14,58;CL:0000215,4.65e-14,58;CL:0002139,1.27e-13,24;CL:0005020,2.44e-11,6;CL:0002138,2.44e-11,6;CL:0005022,2.44e-11,6;CL:0002188,9.01e-09,5;CL:0002144,4.57e-07,3 | |||
|ontology_enrichment_development_v019=CL:0005022;5.96e-12;6 | |ontology_enrichment_development_v019=CL:0005022;5.96e-12;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.39e-13!69;UBERON:0002049!5.69e-12!79;UBERON:0007798!5.69e-12!79;UBERON:0004872!1.16e-10!84;UBERON:0001981!3.93e-10!60;UBERON:0007500!3.93e-10!60;UBERON:0004537!3.93e-10!60;UBERON:0006965!3.93e-10!60;UBERON:0001009!6.20e-10!113;UBERON:0004535!7.73e-09!110;UBERON:0001637!6.22e-08!42;UBERON:0003509!6.22e-08!42;UBERON:0004572!6.22e-08!42;UBERON:0003914!7.53e-08!118;UBERON:0004923!6.79e-07!57 | |ontology_enrichment_uberon=UBERON:0000055!1.39e-13!69;UBERON:0002049!5.69e-12!79;UBERON:0007798!5.69e-12!79;UBERON:0004872!1.16e-10!84;UBERON:0001981!3.93e-10!60;UBERON:0007500!3.93e-10!60;UBERON:0004537!3.93e-10!60;UBERON:0006965!3.93e-10!60;UBERON:0001009!6.20e-10!113;UBERON:0004535!7.73e-09!110;UBERON:0001637!6.22e-08!42;UBERON:0003509!6.22e-08!42;UBERON:0004572!6.22e-08!42;UBERON:0003914!7.53e-08!118;UBERON:0004923!6.79e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0001473;1.35e-13;8!UBERON:0004536;1.35e-13;8!UBERON:0006558;1.35e-13;8!UBERON:0002465;7.88e-11;10!UBERON:0001637;1.93e-09;42!UBERON:0003509;1.93e-09;42!UBERON:0004572;1.93e-09;42!UBERON:0000055;4.37e-09;65!UBERON:0002049;5.49e-09;75!UBERON:0007798;5.49e-09;75!UBERON:0006914;3.00e-08;25!UBERON:0004573;3.69e-07;33!UBERON:0004571;3.69e-07;33!UBERON:0000487;3.76e-07;22!UBERON:0010523;4.03e-07;3!UBERON:0001915;4.03e-07;3!UBERON:0001982;4.03e-07;3!UBERON:0007500;6.96e-07;56!UBERON:0001981;6.96e-07;56!UBERON:0004537;6.96e-07;56 | |ontology_enrichment_uberon_v019=UBERON:0001473;1.35e-13;8!UBERON:0004536;1.35e-13;8!UBERON:0006558;1.35e-13;8!UBERON:0002465;7.88e-11;10!UBERON:0001637;1.93e-09;42!UBERON:0003509;1.93e-09;42!UBERON:0004572;1.93e-09;42!UBERON:0000055;4.37e-09;65!UBERON:0002049;5.49e-09;75!UBERON:0007798;5.49e-09;75!UBERON:0006914;3.00e-08;25!UBERON:0004573;3.69e-07;33!UBERON:0004571;3.69e-07;33!UBERON:0000487;3.76e-07;22!UBERON:0010523;4.03e-07;3!UBERON:0001915;4.03e-07;3!UBERON:0001982;4.03e-07;3!UBERON:0007500;6.96e-07;56!UBERON:0001981;6.96e-07;56!UBERON:0004537;6.96e-07;56 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.37e-19,68;UBERON:0002049,1.66e-16,78;UBERON:0007798,1.66e-16,78;UBERON:0001473,4.42e-13,8;UBERON:0004536,4.42e-13,8;UBERON:0006558,4.42e-13,8;UBERON:0007500,2.51e-12,59;UBERON:0001981,2.51e-12,59;UBERON:0004537,2.51e-12,59;UBERON:0006965,2.51e-12,59;UBERON:0004535,6.96e-12,109;UBERON:0001009,1.92e-11,112;UBERON:0001637,2.89e-11,42;UBERON:0003509,2.89e-11,42;UBERON:0004572,2.89e-11,42;UBERON:0004872,1.42e-10,83;UBERON:0002465,2.01e-10,10;UBERON:0003914,1.39e-08,117;UBERON:0006914,2.83e-08,25;UBERON:0004573,9.59e-08,33;UBERON:0004571,9.59e-08,33;UBERON:0000487,3.50e-07,22;UBERON:0010523,4.57e-07,3;UBERON:0001915,4.57e-07,3;UBERON:0001982,4.57e-07,3;UBERON:0004876,8.60e-07,11 | |||
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| ||
|short_description=p@chr1:22206973..22206987,- | |short_description=p@chr1:22206973..22206987,- | ||
}} | }} |
Latest revision as of 04:12, 28 July 2015
Short description: | p@chr1:22206973..22206987, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:22206973..22206987, - |
Coexpression cluster: | C547_Renal_Endothelial_Mesenchymal_Hepatic_Smooth_Fibroblast_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.49e-18 | 36 |
meso-epithelial cell | 1.84e-16 | 45 |
mesodermal cell | 2.80e-14 | 121 |
lining cell | 4.65e-14 | 58 |
barrier cell | 4.65e-14 | 58 |
endothelial cell of vascular tree | 1.27e-13 | 24 |
lymphangioblast | 2.44e-11 | 6 |
endothelial cell of lymphatic vessel | 2.44e-11 | 6 |
vascular lymphangioblast | 2.44e-11 | 6 |
glomerular endothelial cell | 9.01e-09 | 5 |
capillary endothelial cell | 4.57e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vessel | 1.37e-19 | 68 |
vasculature | 1.66e-16 | 78 |
vascular system | 1.66e-16 | 78 |
lymphatic vessel | 4.42e-13 | 8 |
lymph vasculature | 4.42e-13 | 8 |
lymphatic part of lymphoid system | 4.42e-13 | 8 |
epithelial tube open at both ends | 2.51e-12 | 59 |
blood vessel | 2.51e-12 | 59 |
blood vasculature | 2.51e-12 | 59 |
vascular cord | 2.51e-12 | 59 |
cardiovascular system | 6.96e-12 | 109 |
circulatory system | 1.92e-11 | 112 |
artery | 2.89e-11 | 42 |
arterial blood vessel | 2.89e-11 | 42 |
arterial system | 2.89e-11 | 42 |
splanchnic layer of lateral plate mesoderm | 1.42e-10 | 83 |
lymphoid system | 2.01e-10 | 10 |
epithelial tube | 1.39e-08 | 117 |
squamous epithelium | 2.83e-08 | 25 |
systemic artery | 9.59e-08 | 33 |
systemic arterial system | 9.59e-08 | 33 |
simple squamous epithelium | 3.50e-07 | 22 |
microcirculatory vessel | 4.57e-07 | 3 |
endothelium of capillary | 4.57e-07 | 3 |
capillary | 4.57e-07 | 3 |
urogenital ridge | 8.60e-07 | 11 |