FFCP PHASE1:Hg19::chr1:208322943..208322955,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:208322943..208322955,- | |||
|coexpression_cluster_id=C1847 | |||
|description=CAGE_peak_at_chr1:208322943..208322955,- | |description=CAGE_peak_at_chr1:208322943..208322955,- | ||
|id=chr1:208322943..208322955,- | |id=chr1:208322943..208322955,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002623;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,2.63e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.48e-10;2!UBERON:0006215;1.93e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.57e-30!57;UBERON:0005068!2.57e-30!57;UBERON:0006241!2.57e-30!57;UBERON:0007135!2.57e-30!57;UBERON:0002780!4.37e-26!41;UBERON:0001890!4.37e-26!41;UBERON:0006240!4.37e-26!41;UBERON:0002616!1.18e-25!59;UBERON:0003080!3.25e-25!42;UBERON:0001017!2.69e-24!82;UBERON:0000955!3.99e-24!69;UBERON:0006238!3.99e-24!69;UBERON:0005743!1.18e-23!86;UBERON:0000073!4.31e-22!94;UBERON:0001016!4.31e-22!94;UBERON:0007023!6.40e-21!115;UBERON:0003075!8.31e-21!86;UBERON:0007284!8.31e-21!86;UBERON:0002020!2.96e-20!34;UBERON:0003528!2.96e-20!34;UBERON:0001893!3.62e-20!34;UBERON:0001869!3.68e-20!32;UBERON:0002791!1.91e-19!33;UBERON:0002346!3.11e-19!90;UBERON:0003056!1.14e-17!61;UBERON:0000033!3.04e-16!123;UBERON:0000956!5.05e-15!25;UBERON:0000203!5.05e-15!25;UBERON:0000153!9.19e-15!129;UBERON:0007811!9.19e-15!129;UBERON:0004121!4.86e-13!169;UBERON:0000025!1.08e-12!194;UBERON:0002619!1.81e-12!22;UBERON:0000924!2.38e-12!173;UBERON:0006601!2.38e-12!173;UBERON:0001950!3.68e-12!20;UBERON:0004111!8.05e-12!241;UBERON:0000477!3.74e-10!286;UBERON:0000119!1.09e-08!312;UBERON:0000483!1.34e-08!309;UBERON:0001894!1.49e-07!7;UBERON:0006222!1.49e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.48e-10;2!UBERON:0001873;2.48e-10;2!UBERON:0002757;2.48e-10;2!UBERON:0010134;2.48e-10;2!UBERON:0005408;2.48e-10;2!UBERON:0001899;2.48e-10;2!UBERON:0002114;2.63e-07;2!UBERON:0005383;2.63e-07;3!UBERON:0005382;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001873,1.72e-10,2;UBERON:0010122,1.72e-10,2;UBERON:0001905,3.58e-10,2;UBERON:0002757,3.58e-10,2;UBERON:0010134,3.58e-10,2;UBERON:0005408,3.58e-10,2;UBERON:0001899,3.58e-10,2;UBERON:0005383,2.05e-07,3;UBERON:0005382,2.05e-07,3;UBERON:0002114,2.97e-07,2 | |||
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| ||
|short_description=p@chr1:208322943..208322955,- | |short_description=p@chr1:208322943..208322955,- | ||
}} | }} |
Latest revision as of 03:14, 28 July 2015
Short description: | p@chr1:208322943..208322955, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:208322943..208322955, - |
Coexpression cluster: | C1847_gastrointestinal_cerebellum_parietal_middle_salivary_acute_Neurons |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 1.72e-10 | 2 |
future caudate nucleus | 1.72e-10 | 2 |
pineal body | 3.58e-10 | 2 |
regional part of epithalamus | 3.58e-10 | 2 |
secretory circumventricular organ | 3.58e-10 | 2 |
circumventricular organ | 3.58e-10 | 2 |
epithalamus | 3.58e-10 | 2 |
caudate-putamen | 2.05e-07 | 3 |
dorsal striatum | 2.05e-07 | 3 |
duodenum | 2.97e-07 | 2 |