FFCP PHASE1:Hg19::chr1:205889360..205889374,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:205889360..205889374,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_at_chr1:205889360..205889374,- | |description=CAGE_peak_at_chr1:205889360..205889374,- | ||
|id=chr1:205889360..205889374,- | |id=chr1:205889360..205889374,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;8.01e-35;4!UBERON:0007284;8.01e-35;4!UBERON:0010227;7.57e-17;1!UBERON:0010226;7.57e-17;1!UBERON:0004140;1.04e-16;1!UBERON:0003104;9.36e-08;31 | |||
|ontology_enrichment_disease=DOID:1287!3.21e-09!4;DOID:114!5.63e-09!2 | |ontology_enrichment_disease=DOID:1287!3.21e-09!4;DOID:114!5.63e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:114;8.57e-32;2!DOID:178;1.31e-16;1!DOID:326;1.31e-16;1!DOID:3978;1.31e-16;1!DOID:3394;1.31e-16;1!DOID:5844;1.31e-16;1!DOID:1287;1.93e-16;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.00e-31,2;DOID:178,1.41e-16,1;DOID:326,1.41e-16,1;DOID:3978,1.41e-16,1;DOID:3394,1.41e-16,1;DOID:5844,1.41e-16,1;DOID:1287,2.09e-16,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.65e-32!115;UBERON:0004151!1.34e-12!3;UBERON:0003978!1.61e-12!3;UBERON:0009751!1.61e-12!3;UBERON:0000946!1.61e-12!3;UBERON:0002523!1.61e-12!3;UBERON:0005983!1.61e-12!3;UBERON:0002165!1.61e-12!3;UBERON:0002062!1.61e-12!3;UBERON:0007280!1.61e-12!3;UBERON:0007100!3.24e-10!27;UBERON:0003075!5.53e-10!86;UBERON:0007284!5.53e-10!86;UBERON:0002346!2.35e-09!90;UBERON:0001017!4.57e-09!82;UBERON:0002081!6.31e-09!2;UBERON:0002133!7.07e-09!2;UBERON:0001049!1.44e-08!57;UBERON:0005068!1.44e-08!57;UBERON:0006241!1.44e-08!57;UBERON:0007135!1.44e-08!57;UBERON:0005743!1.79e-08!86;UBERON:0002360!1.01e-07!2;UBERON:0000094!1.01e-07!2;UBERON:0007645!1.01e-07!2;UBERON:0000955!1.46e-07!69;UBERON:0006238!1.46e-07!69;UBERON:0000073!2.52e-07!94;UBERON:0001016!2.52e-07!94;UBERON:0002298!3.30e-07!8;UBERON:0002616!6.74e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;7.48e-49;25!UBERON:0004151;2.24e-46;3!UBERON:0003978;3.86e-46;3!UBERON:0000946;3.86e-46;3!UBERON:0002081;2.18e-31;2!UBERON:0002133;3.74e-31;2!UBERON:0000948;7.55e-25;22!UBERON:0002084;7.57e-17;1!UBERON:0002079;7.57e-17;1!UBERON:0002146;7.57e-17;1!UBERON:0002082;7.57e-17;1!UBERON:0005623;7.57e-17;1!UBERON:0002135;1.31e-16;1!UBERON:0002134;2.25e-16;1!UBERON:0005208;2.25e-16;1!UBERON:0004145;2.25e-16;1!UBERON:0005946;2.25e-16;1!UBERON:0005965;2.25e-16;1!UBERON:0002078;2.25e-16;1!UBERON:0010313;2.28e-14;10!UBERON:0003103;5.44e-10;61!UBERON:0001875;7.49e-09;2!UBERON:0006514;7.49e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.41e-46,3;UBERON:0003978,3.06e-46,3;UBERON:0009751,3.06e-46,3;UBERON:0000946,3.06e-46,3;UBERON:0002523,3.06e-46,3;UBERON:0005983,3.06e-46,3;UBERON:0002165,3.06e-46,3;UBERON:0002062,3.06e-46,3;UBERON:0007280,3.06e-46,3;UBERON:0007100,3.07e-45,27;UBERON:0002081,1.60e-31,2;UBERON:0010227,1.60e-31,2;UBERON:0002133,2.54e-31,2;UBERON:0000948,8.22e-23,24;UBERON:0005498,8.22e-23,24;UBERON:0004140,8.22e-23,24;UBERON:0009881,8.22e-23,24;UBERON:0004141,8.22e-23,24;UBERON:0003084,8.22e-23,24;UBERON:0007005,8.22e-23,24;UBERON:0004139,8.22e-23,24;UBERON:0004291,8.22e-23,24;UBERON:0004797,2.82e-20,7;UBERON:0003103,1.43e-17,68;UBERON:0002084,6.47e-17,1;UBERON:0002082,6.47e-17,1;UBERON:0010226,6.47e-17,1;UBERON:0002079,7.57e-17,1;UBERON:0002146,8.86e-17,1;UBERON:0005623,8.86e-17,1;UBERON:0002135,1.21e-16,1;UBERON:0002134,1.65e-16,1;UBERON:0005208,1.65e-16,1;UBERON:0005946,1.65e-16,1;UBERON:0005965,1.65e-16,1;UBERON:0002078,1.65e-16,1;UBERON:0007023,3.03e-15,114;UBERON:0010313,2.13e-14,10;UBERON:0002342,2.13e-14,10;UBERON:0005062,2.13e-14,10;UBERON:0001009,2.36e-10,112;UBERON:0001875,7.49e-09,2;UBERON:0006514,7.49e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0.470940769185074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,2.79282401272254,7.10397314436219,1.43574604915363,2.39614800598789,11.5891032996874,11.8280872444192,5.77777863385846,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,7.86164859010704,7.94510364438518,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0.640724475406168,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10406443001755,0,0,0,0,0,0,0,0,0.138314504928436,0.484426936895553,0,0,0,0,0,0,0,0.198916222116275,0,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.197318320688547,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33461648913121,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0.23806443146374,0,0,0,1.14564884900697,0,0.435433495793923,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0.470940769185074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,2.79282401272254,7.10397314436219,1.43574604915363,2.39614800598789,11.5891032996874,11.8280872444192,5.77777863385846,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,7.86164859010704,7.94510364438518,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0.640724475406168,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10406443001755,0,0,0,0,0,0,0,0,0.138314504928436,0.484426936895553,0,0,0,0,0,0,0,0.198916222116275,0,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.197318320688547,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33461648913121,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0.23806443146374,0,0,0,1.14564884900697,0,0.435433495793923,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:205889360..205889374,- | |short_description=p@chr1:205889360..205889374,- | ||
}} | }} |
Latest revision as of 02:51, 28 July 2015
Short description: | p@chr1:205889360..205889374, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:205889360..205889374, - |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 1.00e-31 | 2 |
vascular disease | 1.41e-16 | 1 |
ischemia | 1.41e-16 | 1 |
extrinsic cardiomyopathy | 1.41e-16 | 1 |
myocardial ischemia | 1.41e-16 | 1 |
myocardial infarction | 1.41e-16 | 1 |
cardiovascular system disease | 2.09e-16 | 4 |