FFCP PHASE1:Hg19::chr1:20407255..20407264,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:20407255..20407264,+ | |||
|description=CAGE_peak_at_chr1:20407255..20407264,+ | |description=CAGE_peak_at_chr1:20407255..20407264,+ | ||
|id=chr1:20407255..20407264,+ | |id=chr1:20407255..20407264,+ | ||
|ontology_enrichment_celltype=CL:0002139!2.51e-14!24;CL:0000115!5.85e-12!35;CL:0005020!2.25e-09!6;CL:0002138!2.25e-09!6;CL:0005022!2.25e-09!6;CL:0002078!3.38e-09!44;CL:0002144!8.41e-09!3;CL:0000746!1.28e-08!3;CL:0000513!1.28e-08!3;CL:0000071!7.37e-08!18;CL:0002546!7.37e-08!18;CL:0002379!2.09e-07!1;CL:0002557!3.36e-07!1;CL:0000213!9.33e-07!57;CL:0000215!9.33e-07!57 | |ontology_enrichment_celltype=CL:0002139!2.51e-14!24;CL:0000115!5.85e-12!35;CL:0005020!2.25e-09!6;CL:0002138!2.25e-09!6;CL:0005022!2.25e-09!6;CL:0002078!3.38e-09!44;CL:0002144!8.41e-09!3;CL:0000746!1.28e-08!3;CL:0000513!1.28e-08!3;CL:0000071!7.37e-08!18;CL:0002546!7.37e-08!18;CL:0002379!2.09e-07!1;CL:0002557!3.36e-07!1;CL:0000213!9.33e-07!57;CL:0000215!9.33e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002379;1.53e-21;1!CL:0002557;5.16e-21;1!CL:0002139;1.02e-20;24!CL:0000115;1.43e-17;36!CL:0002138;3.97e-14;6!CL:0002262;3.34e-11;2!CL:0002545;3.34e-11;2!CL:1000398;3.34e-11;2!CL:0000071;1.39e-10;18!CL:1000413;9.65e-10;9!CL:0002078;1.91e-09;45!CL:0002144;5.01e-08;3!CL:0000746;5.01e-08;3!CL:0000213;5.04e-07;58!CL:0000215;5.04e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,1.53e-21,1;CL:0002557,7.72e-21,1;CL:0002139,9.57e-21,24;CL:0000115,1.04e-19,36;CL:0002078,9.04e-16,45;CL:0005020,3.71e-14,6;CL:0002138,3.71e-14,6;CL:0005022,3.71e-14,6;CL:0000213,3.16e-12,58;CL:0000215,3.16e-12,58;CL:0002545,2.47e-11,2;CL:0002262,3.35e-11,2;CL:1000398,3.35e-11,2;CL:0000071,1.37e-10,18;CL:0002546,1.37e-10,18;CL:1000413,9.65e-10,9;CL:0002144,4.84e-08,3;CL:0000746,5.18e-08,3;CL:0000513,5.18e-08,3;CL:0000222,8.73e-08,121 | |||
|ontology_enrichment_development_v019=CL:0005022;3.97e-14;6!CL:0002546;1.39e-10;18!CL:0000513;5.01e-08;3 | |||
|ontology_enrichment_disease=DOID:3620!2.09e-07!1;DOID:3565!2.09e-07!1;DOID:2355!5.06e-07!1;DOID:9119!6.02e-07!1 | |ontology_enrichment_disease=DOID:3620!2.09e-07!1;DOID:3565!2.09e-07!1;DOID:2355!5.06e-07!1;DOID:9119!6.02e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:3620;1.53e-21;1!DOID:3565;1.53e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,1.53e-21,1;DOID:3565,1.53e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0002465!2.60e-09!10;UBERON:0001915!8.41e-09!3;UBERON:0001982!8.41e-09!3;UBERON:0000055!4.92e-08!69;UBERON:0001986!7.37e-08!18;UBERON:0004638!7.37e-08!18;UBERON:0004852!7.37e-08!18;UBERON:0004872!1.99e-07!84;UBERON:0004535!2.30e-07!110;UBERON:0001473!3.93e-07!8;UBERON:0004536!3.93e-07!8;UBERON:0006558!3.93e-07!8;UBERON:0001009!4.26e-07!113;UBERON:0002171!5.69e-07!1;UBERON:0006518!5.69e-07!1;UBERON:0008949!5.69e-07!1;UBERON:0000101!5.69e-07!1;UBERON:0002167!5.69e-07!1;UBERON:0002049!9.23e-07!79;UBERON:0007798!9.23e-07!79 | |ontology_enrichment_uberon=UBERON:0002465!2.60e-09!10;UBERON:0001915!8.41e-09!3;UBERON:0001982!8.41e-09!3;UBERON:0000055!4.92e-08!69;UBERON:0001986!7.37e-08!18;UBERON:0004638!7.37e-08!18;UBERON:0004852!7.37e-08!18;UBERON:0004872!1.99e-07!84;UBERON:0004535!2.30e-07!110;UBERON:0001473!3.93e-07!8;UBERON:0004536!3.93e-07!8;UBERON:0006558!3.93e-07!8;UBERON:0001009!4.26e-07!113;UBERON:0002171!5.69e-07!1;UBERON:0006518!5.69e-07!1;UBERON:0008949!5.69e-07!1;UBERON:0000101!5.69e-07!1;UBERON:0002167!5.69e-07!1;UBERON:0002049!9.23e-07!79;UBERON:0007798!9.23e-07!79 | ||
|ontology_enrichment_uberon_v019=UBERON:0001281;3.34e-11;2!UBERON:0003497;3.34e-11;2!UBERON:0003909;3.34e-11;2!UBERON:0005800;3.34e-11;2!UBERON:0000078;3.34e-11;2!UBERON:0003835;3.34e-11;2!UBERON:0001515;3.34e-11;2!UBERON:0002012;3.34e-11;2!UBERON:0008886;3.34e-11;2!UBERON:0001473;7.67e-11;8!UBERON:0004536;7.67e-11;8!UBERON:0006558;7.67e-11;8!UBERON:0004638;1.39e-10;18!UBERON:0001986;1.39e-10;18!UBERON:0004852;1.39e-10;18!UBERON:0003915;9.65e-10;9!UBERON:0004700;9.65e-10;9!UBERON:0001917;9.65e-10;9!UBERON:0002465;7.36e-09;10!UBERON:0000487;9.06e-09;22!UBERON:0000055;1.63e-08;65!UBERON:0010523;5.01e-08;3!UBERON:0001915;5.01e-08;3!UBERON:0001982;5.01e-08;3!UBERON:0001280;6.78e-08;3!UBERON:0004647;6.78e-08;3!UBERON:0006914;8.71e-08;25!UBERON:0007500;3.22e-07;56!UBERON:0001981;3.22e-07;56!UBERON:0004537;3.22e-07;56!UBERON:0002049;9.34e-07;75!UBERON:0007798;9.34e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,5.13e-14,68;UBERON:0002049,3.43e-12,78;UBERON:0007798,3.43e-12,78;UBERON:0005800,2.47e-11,2;UBERON:0001515,2.47e-11,2;UBERON:0004535,2.79e-11,109;UBERON:0001281,3.35e-11,2;UBERON:0003497,3.35e-11,2;UBERON:0003909,3.35e-11,2;UBERON:0003835,3.35e-11,2;UBERON:0000078,4.09e-11,2;UBERON:0007497,4.09e-11,2;UBERON:0003643,4.09e-11,2;UBERON:0003504,4.09e-11,2;UBERON:0003469,4.09e-11,2;UBERON:0003496,4.09e-11,2;UBERON:0002012,4.09e-11,2;UBERON:0008886,4.09e-11,2;UBERON:0007303,4.09e-11,2;UBERON:0002061,4.09e-11,2;UBERON:0005432,4.09e-11,2;UBERON:0004363,4.09e-11,2;UBERON:0001009,5.74e-11,112;UBERON:0001473,7.30e-11,8;UBERON:0004536,7.30e-11,8;UBERON:0006558,7.30e-11,8;UBERON:0004638,1.37e-10,18;UBERON:0001986,1.37e-10,18;UBERON:0004852,1.37e-10,18;UBERON:0003915,9.65e-10,9;UBERON:0004700,9.65e-10,9;UBERON:0001917,9.65e-10,9;UBERON:0002465,7.07e-09,10;UBERON:0000487,8.94e-09,22;UBERON:0004872,1.61e-08,83;UBERON:0007500,1.67e-08,59;UBERON:0001981,1.67e-08,59;UBERON:0004537,1.67e-08,59;UBERON:0006965,1.67e-08,59;UBERON:0010523,4.84e-08,3;UBERON:0001915,4.84e-08,3;UBERON:0001982,4.84e-08,3;UBERON:0001280,6.78e-08,3;UBERON:0004647,6.78e-08,3;UBERON:0005171,6.78e-08,3;UBERON:0004145,7.76e-08,3;UBERON:0006914,8.61e-08,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.255725123687061,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,1.10047216776027,0.208994966536811,0,0,0,2.41697590265488,0.760272105718513,0,0,1.62028389576352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.942974704487816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58803092537181,0.925971025153221,1.14152491340759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850468526382578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508039992394707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58636928128176,0,0,0,0,0,0,0.320362237703084,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.17584803335978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.476128862927481,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.255725123687061,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,1.10047216776027,0.208994966536811,0,0,0,2.41697590265488,0.760272105718513,0,0,1.62028389576352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.942974704487816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58803092537181,0.925971025153221,1.14152491340759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850468526382578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508039992394707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58636928128176,0,0,0,0,0,0,0.320362237703084,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.17584803335978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.476128862927481,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr1:20407255..20407264,+ | |short_description=p@chr1:20407255..20407264,+ | ||
}} | }} |
Latest revision as of 02:33, 28 July 2015
Short description: | p@chr1:20407255..20407264, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:20407255..20407264, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 1.53e-21 | 1 |
fibroblast of pulmonary artery | 7.72e-21 | 1 |
endothelial cell of vascular tree | 9.57e-21 | 24 |
endothelial cell | 1.04e-19 | 36 |
meso-epithelial cell | 9.04e-16 | 45 |
lymphangioblast | 3.71e-14 | 6 |
endothelial cell of lymphatic vessel | 3.71e-14 | 6 |
vascular lymphangioblast | 3.71e-14 | 6 |
lining cell | 3.16e-12 | 58 |
barrier cell | 3.16e-12 | 58 |
thoracic aorta endothelial cell | 2.47e-11 | 2 |
endothelial cell of sinusoid | 3.35e-11 | 2 |
endothelial cell of hepatic sinusoid | 3.35e-11 | 2 |
blood vessel endothelial cell | 1.37e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.37e-10 | 18 |
endothelial cell of artery | 9.65e-10 | 9 |
capillary endothelial cell | 4.84e-08 | 3 |
cardiac muscle cell | 5.18e-08 | 3 |
cardiac muscle myoblast | 5.18e-08 | 3 |
mesodermal cell | 8.73e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.53e-21 | 1 |
meningioma | 1.53e-21 | 1 |