FFCP PHASE1:Hg19::chr1:203148271..203148296,+: Difference between revisions
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|id=chr1:203148271..203148296,+
|short_description=p7@CU678996
|description=CAGE_peak_7_at_CU678996_5end
|association_with_transcript=-277bp_to_CU678996_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-277bp_to_CU678996_5end | |||
|cluster_id=chr1:203148271..203148296,+ | |||
|coexpression_cluster_id=C283 | |||
|description=CAGE_peak_7_at_CU678996_5end | |||
|id=chr1:203148271..203148296,+ | |||
|ontology_enrichment_celltype=CL:0000153!6.68e-16!9;CL:0000447!6.68e-16!9;CL:0000135!1.39e-12!3;CL:0000386!1.39e-12!3;CL:0000388!1.39e-12!3;CL:0000667!4.60e-11!6;CL:0000058!4.60e-11!6;CL:0000138!4.60e-11!6;CL:0000499!1.70e-10!27;CL:0000327!5.88e-10!14 | |||
|ontology_enrichment_celltype_v019=CL:0000153;1.87e-39;9!CL:0000447;1.87e-39;9!CL:0000235;9.70e-38;6!CL:0000327;9.62e-24;15!CL:0000138;5.40e-22;6!CL:0002540;6.93e-22;6!CL:0000214;5.37e-20;3!CL:0000499;3.79e-18;28!CL:0002092;2.11e-13;10!CL:0000151;1.17e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.26e-39,9;CL:0000447,1.26e-39,9;CL:0000235,1.17e-37,6;CL:0000327,7.59e-24,15;CL:0000058,5.03e-22,6;CL:0000138,5.03e-22,6;CL:0002540,6.70e-22,6;CL:0000214,3.66e-20,3;CL:0000499,3.26e-18,28;CL:0002092,2.07e-13,10;CL:0000151,5.92e-10,36 | |||
|ontology_enrichment_development_v019=UBERON:0010115;2.21e-15;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000043!1.39e-12!3;UBERON:0002360!1.37e-08!2;UBERON:0000094!1.37e-08!2;UBERON:0007645!1.37e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;5.37e-20;3!UBERON:0007616;5.37e-20;3!UBERON:0002217;5.37e-20;3!UBERON:0002018;5.37e-20;3!UBERON:0002363;2.21e-15;1!UBERON:0002371;2.87e-11;12!UBERON:0001434;1.54e-08;36!UBERON:0002360;2.40e-08;2!UBERON:0000094;2.40e-08;2!UBERON:0010743;2.40e-08;2!UBERON:0004905;4.34e-08;8!UBERON:0000982;4.34e-08;8!UBERON:0004770;4.34e-08;8!UBERON:0001474;1.07e-07;18!UBERON:0004457;2.77e-07;9!UBERON:0000042;2.77e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,3.66e-20,3;UBERON:0007616,3.66e-20,3;UBERON:0002217,3.66e-20,3;UBERON:0002018,3.66e-20,3;UBERON:0002363,3.66e-15,1;UBERON:0007645,3.66e-15,1;UBERON:0007647,3.66e-15,1;UBERON:0010115,3.66e-15,1;UBERON:0001434,1.71e-10,100;UBERON:0002371,1.71e-08,76;UBERON:0002360,3.08e-08,2;UBERON:0000094,3.08e-08,2;UBERON:0010743,3.08e-08,2;UBERON:0004905,3.77e-08,8;UBERON:0000982,3.77e-08,8;UBERON:0004770,3.77e-08,8;UBERON:0001474,7.72e-08,82;UBERON:0002204,2.08e-07,167;UBERON:0004765,4.23e-07,90;UBERON:0002405,7.43e-07,93 | |||
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| ||
|short_description=p7@CU678996 | |||
}} | }} |
Latest revision as of 02:23, 28 July 2015
Short description: | p7@CU678996 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CU678996_5end |
Coexpression cluster: | C283_tenocyte_Chondrocyte_mesenchymal_Macrophage_pleomorphic_Synoviocyte_cholangiocellular |
Association with transcript: | -277bp_to_CU678996_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.26e-39 | 9 |
carbohydrate secreting cell | 1.26e-39 | 9 |
macrophage | 1.17e-37 | 6 |
extracellular matrix secreting cell | 7.59e-24 | 15 |
chondroblast | 5.03e-22 | 6 |
chondrocyte | 5.03e-22 | 6 |
mesenchymal stem cell of the bone marrow | 6.70e-22 | 6 |
synovial cell | 3.66e-20 | 3 |
stromal cell | 3.26e-18 | 28 |
bone marrow cell | 2.07e-13 | 10 |
secretory cell | 5.92e-10 | 36 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 3.66e-20 | 3 |
layer of synovial tissue | 3.66e-20 | 3 |
synovial joint | 3.66e-20 | 3 |
synovial membrane of synovial joint | 3.66e-20 | 3 |
dura mater | 3.66e-15 | 1 |
future meninx | 3.66e-15 | 1 |
ectomeninx | 3.66e-15 | 1 |
future dura mater | 3.66e-15 | 1 |
skeletal system | 1.71e-10 | 100 |
bone marrow | 1.71e-08 | 76 |
meninx | 3.08e-08 | 2 |
membrane organ | 3.08e-08 | 2 |
meningeal cluster | 3.08e-08 | 2 |
articulation | 3.77e-08 | 8 |
skeletal joint | 3.77e-08 | 8 |
articular system | 3.77e-08 | 8 |
bone element | 7.72e-08 | 82 |
musculoskeletal system | 2.08e-07 | 167 |
skeletal element | 4.23e-07 | 90 |
immune system | 7.43e-07 | 93 |