FFCP PHASE1:Hg19::chr1:201979508..201979529,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-27bp_to_ENST00000419190_5end | |||
|cluster_id=chr1:201979508..201979529,- | |||
|description=CAGE_peak_2_at_ENST00000419190_5end | |||
|id=chr1:201979508..201979529,- | |||
|ontology_enrichment_celltype=CL:0000066!2.71e-21!254;CL:0000039!1.15e-09!7;CL:0000586!1.15e-09!7;CL:0000223!6.32e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.14e-15;7!CL:0000586;3.14e-15;7!CL:0002553;3.31e-08;1!CL:0000167;1.07e-07;1!CL:0000164;1.07e-07;1!CL:0000502;1.07e-07;1!CL:0000172;1.07e-07;1!CL:0000173;1.07e-07;1!CL:0000083;2.75e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.27e-15,7;CL:0000586,3.27e-15,7;CL:0002553,3.55e-08,1;CL:0000167,1.64e-07,1;CL:0000164,1.64e-07,1;CL:0000502,1.64e-07,1;CL:0000172,1.64e-07,1;CL:0000173,1.64e-07,1;CL:0002351,1.64e-07,1;CL:0000083,2.35e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002351;1.07e-07;1!UBERON:0003124;1.07e-07;1 | |||
|ontology_enrichment_disease=DOID:305!9.07e-44!106;DOID:0050687!1.53e-33!143;DOID:162!4.70e-19!235;DOID:14566!3.97e-18!239;DOID:1749!3.37e-13!14;DOID:0050615!8.33e-08!16;DOID:7!1.17e-07!39;DOID:299!1.63e-07!25;DOID:1324!9.80e-07!15 | |||
|ontology_enrichment_disease_v019=DOID:0050619;4.65e-08;1!DOID:1357;4.65e-08;1!DOID:1799;1.07e-07;1!DOID:10165;1.07e-07;1!DOID:1798;1.07e-07;1!DOID:4430;1.07e-07;1!DOID:1793;2.75e-07;4!DOID:3095;3.13e-07;22!DOID:2994;3.13e-07;22!DOID:0050615;5.83e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,9.48e-10,143;DOID:305,2.43e-09,106;DOID:0050619,4.07e-08,1;DOID:1357,4.07e-08,1;DOID:162,4.98e-08,235;DOID:14566,8.93e-08,239;DOID:1799,1.35e-07,1;DOID:10165,1.35e-07,1;DOID:1798,1.35e-07,1;DOID:4430,1.64e-07,1;DOID:1793,2.35e-07,4;DOID:3095,3.47e-07,22;DOID:2994,3.47e-07,22;DOID:0050615,5.83e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0001007!9.03e-19!155;UBERON:0001555!9.03e-19!155;UBERON:0007026!9.03e-19!155;UBERON:0004921!1.57e-18!129;UBERON:0004185!1.57e-18!129;UBERON:0004119!6.71e-18!169;UBERON:0000925!6.71e-18!169;UBERON:0006595!6.71e-18!169;UBERON:0000077!8.31e-16!130;UBERON:0001041!6.64e-13!98;UBERON:0008947!1.13e-11!38;UBERON:0003258!1.13e-11!38;UBERON:0001004!4.25e-11!72;UBERON:0000072!1.64e-10!46;UBERON:0000065!6.93e-10!53;UBERON:0005911!9.08e-09!82;UBERON:0001737!3.26e-08!9;UBERON:0000466!6.68e-08!126;UBERON:0005153!3.20e-07!37;UBERON:0003104!4.66e-07!238;UBERON:0009142!4.66e-07!238;UBERON:0001557!5.70e-07!19;UBERON:0005156!6.04e-07!59;UBERON:0000990!6.04e-07!59;UBERON:0000464!6.06e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.04e-13;2!UBERON:0001764;4.65e-08;1!UBERON:0001825;4.65e-08;1!UBERON:0003343;1.56e-07;4!UBERON:0004785;1.56e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,8.60e-14,2;UBERON:0001764,4.07e-08,1;UBERON:0001825,4.07e-08,1;UBERON:0003343,2.00e-07,4;UBERON:0004785,2.00e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,2.09340350391728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.246301768349837,0.472264687882075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.397589304964456,0.813357600086629,0.518305275076852,0.504641701751257,0,0,0,0,0,0,0.354920400119532,0.674338760312407,0,0.330881918197182,0.435758888184812,0.474541238222193,0.539325232640658,0.784885860501384,0.38474715694639,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0.276242966807689,0,0,0,0.902399225814824,0.15403067420883,0,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66866030566487,0,0.71623345421307,0.296964680832639,0,0,0,0.222617410045812,0,0,0,0,0.251932747854276,0,0.369254416383208,0,0.0898683511473268,2.14825409610731,0,0.0986434056369336,0,0,0,0,0,0.520855522170466,0.174919999992391,0,0.568967241427498,3.0510438035132,0.945550727071745,0,0,0,0,0,0,0,0,0,0.10893846351899,1.67308493134324,0.0769502585037971,0,0.46112780877612,1.43612231055635,3.47671590150426,0.638002319463839,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.421996129056054,0.163232808159148,0.706765357169704,0,0.995261931078505,0.0884575645033392,1.22206028986725,1.18608451472249,1.72989514525104,1.67075119208729,0,0,0,0,1.9566461893209,0,0.394584402849391,0,0,0,0.150323419414493,0,0.664653872707185,0,0,0,0.284609546029793,0.138674673013139,0.694238953340524,0.195984794828755,0.34823682632161,0,0,0.387025325156341,0.950161122120412,0.410577285266046,0,0,1.58186518546373,0,0,0,10.3642232849446,0.0801588202515337,0,0.19980960958213,1.15272333723285,0,0.343189995723929,0,0,0.471388069233591,0.271808412147228,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0.0671834724867263,0,0,0.315132729228895,0.164831716762333,0.13480708770837,0.885847333632739,0.169346664131569,0,0,0.160753148465019,0.550157746388935,0.83088067605837,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0.171086837884329,3.52407511158336,0,0.157204305099666,0.414239055347196,0,0.395223263795889,0,0.638341257770182,0,0,0,0,2.98402782875445,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0.192914038270915,0,0.512483037175893,2.07258205038719,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,3.20228299314188,0,0,0,0,0,0,0,0,0,0,3.72961330303897,0.707818340086442,0.550285795565037,1.03973099535304,0,0,0,0,0,0,1.30953347240711,0,0.147856086217045,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0.894336993477167,0,0,0,0.227662191351298,1.41923792260222,0,0,0,0,0.709163045303809,0.444925607568277,0.470958557103084,0,1.96190514319652,0,0.215927591218621,0.47775168788705,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0.430227358820278,0,0,0,1.60374807980835,0.31020638566432,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0.22589216407792,0,0.301925687133347,0.308696632431779,0.437119121007915,1.88126918544609,0,1.17838273550813,0,0,0,0,0,0,0,0.892769693028288,0.352894871715692,0.481448200135009,0.730336388246517,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0.509944148709909,2.6721740526556,1.37842349302267,0.250707539292375,0,0,0,0,0.639701945702943,0.476128862927481,0,0.0620747142958579,0,0.381882949668989,0.202117188958219,0.435433495793923,0,0.26940821205835,1.43444410785353,1.66330178273007,0.244209805832924,0.213454691755431,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | |||
|short_description=p2@ENST00000419190 | |||
}} |
Latest revision as of 02:14, 28 July 2015
Short description: | p2@ENST00000419190 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000419190_5end |
Coexpression cluster: | NA |
Association with transcript: | -27bp_to_ENST00000419190_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.27e-15 | 7 |
germ cell | 3.27e-15 | 7 |
lung fibroblast | 3.55e-08 | 1 |
peptide hormone secreting cell | 1.64e-07 | 1 |
enteroendocrine cell | 1.64e-07 | 1 |
type D enteroendocrine cell | 1.64e-07 | 1 |
somatostatin secreting cell | 1.64e-07 | 1 |
pancreatic D cell | 1.64e-07 | 1 |
progenitor cell of endocrine pancreas | 1.64e-07 | 1 |
epithelial cell of pancreas | 2.35e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 8.60e-14 | 2 |
maxillary sinus | 4.07e-08 | 1 |
paranasal sinus | 4.07e-08 | 1 |
mucosa of oral region | 2.00e-07 | 4 |
respiratory system mucosa | 2.00e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 9.48e-10 | 143 |
carcinoma | 2.43e-09 | 106 |
paranasal sinus cancer | 4.07e-08 | 1 |
maxillary sinus cancer | 4.07e-08 | 1 |
cancer | 4.98e-08 | 235 |
disease of cellular proliferation | 8.93e-08 | 239 |
islet cell tumor | 1.35e-07 | 1 |
endocrine pancreas cancer | 1.35e-07 | 1 |
pancreatic endocrine carcinoma | 1.35e-07 | 1 |
somatostatinoma | 1.64e-07 | 1 |
pancreatic cancer | 2.35e-07 | 4 |
germ cell and embryonal cancer | 3.47e-07 | 22 |
germ cell cancer | 3.47e-07 | 22 |
respiratory system cancer | 5.83e-07 | 16 |