FFCP PHASE1:Hg19::chr1:19983866..19983874,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:19983866..19983874,+ | |||
|coexpression_cluster_id=C315 | |||
|description=CAGE_peak_at_chr1:19983866..19983874,+ | |description=CAGE_peak_at_chr1:19983866..19983874,+ | ||
|id=chr1:19983866..19983874,+ | |id=chr1:19983866..19983874,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.03e-09!180;CL:0000499!8.48e-08!27 | |ontology_enrichment_celltype=CL:0000055!3.03e-09!180;CL:0000499!8.48e-08!27 | ||
|ontology_enrichment_celltype_v019=CL:0002617;2.10e-11;2!CL:0002595;3.58e-10;5!CL:0000214;2.14e-08;3!CL:0002567;3.87e-08;3!CL:0000307;6.94e-08;3!CL:0002622;6.94e-08;3!CL:0002591;6.41e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,1.18e-11,2;CL:0002595,3.48e-10,5;CL:0000214,1.99e-08,3;CL:0002567,5.44e-08,3;CL:0002622,8.58e-08,3;CL:0000068,9.85e-08,3;CL:0000069,9.85e-08,3;CL:0000307,9.85e-08,3;CL:0000377,9.85e-08,3;CL:0002591,7.60e-07,1;CL:0002616,8.97e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000377;6.94e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;3.87e-08;3!DOID:127;3.87e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.76e-08,3;DOID:127,2.76e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.14e-07!83;UBERON:0002329!2.14e-07!83;UBERON:0003077!2.14e-07!83;UBERON:0003059!2.14e-07!83;UBERON:0007282!2.14e-07!83;UBERON:0009618!2.14e-07!83;UBERON:0007285!2.14e-07!83 | |ontology_enrichment_uberon=UBERON:0000914!2.14e-07!83;UBERON:0002329!2.14e-07!83;UBERON:0003077!2.14e-07!83;UBERON:0003059!2.14e-07!83;UBERON:0007282!2.14e-07!83;UBERON:0009618!2.14e-07!83;UBERON:0007285!2.14e-07!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0005406;2.10e-11;2!UBERON:0003834;3.58e-10;5!UBERON:0001533;3.58e-10;5!UBERON:0006915;2.14e-08;3!UBERON:0007616;2.14e-08;3!UBERON:0002217;2.14e-08;3!UBERON:0002018;2.14e-08;3!UBERON:0003513;2.16e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,8.98e-12,2;UBERON:0003834,3.48e-10,5;UBERON:0001533,3.48e-10,5;UBERON:0006915,1.99e-08,3;UBERON:0007616,1.99e-08,3;UBERON:0002217,1.99e-08,3;UBERON:0002018,1.99e-08,3;UBERON:0003513,2.12e-07,7;UBERON:0004905,1.00e-06,8;UBERON:0000982,1.00e-06,8;UBERON:0004770,1.00e-06,8 | |||
|phase1_expression=1.81678379270557,1.2846031433459,0.563817616383885,0,0.446961094427288,1.74467704820074,0,5.05375898741465,0.522371256399677,0.245733936501509,0,0,0.263766978228454,0.123766352960047,0.662794751455832,0,0,0,0,0,0.408001382488506,0.313454721478088,0,0,0.376627918784408,0,0,0,0,0,0.154816123316076,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0,0,0.50133791063589,0.724232594804119,0.795285947051099,0.486634870302636,0,0.443458794925128,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838998872419812,0,0,0,0,0,0,0,0.732186172644509,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0.354668382198357,0,0,0,0,0.538842688278752,0,0.605429710579726,4.03323147135999,0.234321431833797,0.312160076830321,0,0.298897361103602,0.23486899728753,0.485618833104395,0.140450806702248,0.408308342509787,0,0.103325781175765,0,0.494533858557114,0,0.718618141816238,0.168336113954066,0,0,0,1.22595118319608,0.300476117813194,0,0.179389635688862,0,0.211931901159562,0.300091096084402,0,0,0,0.168776332241266,0,0,0.0920498986422993,0.969876340912871,0,0.201504196455281,0,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,1.56449532329816,0.643240938192885,0,0.464367928031979,0.721879481669586,0.118306800039844,0,0,0.220587945464788,0,0,0,0,0,0.738155454624648,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0.93733833986777,0.16798212819886,0.425325291727159,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,2.29193055334967,1.17217447210047,0,0.925447434329912,0.600686115687835,0.857479297891735,0.224262168690721,0.87192013766656,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,3.31583314765545,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,1.50051156317903,0.271265023699736,0,0.178428988797162,0,0.117141414992713,0,22.7407504055985,0,0,0.368738337083406,0.173767228936166,0.587403472388222,0.686286847621712,0,0.215714200818617,0,0,0,0,0.496215615637554,0.153461973288062,0.841980283299221,0.128139149255701,0,0.160853921143607,1.48418066444991,0.154209693802656,1.24293207719189,0.246381468041427,0,1.27831416305955,0.120859449591622,1.20303882181971,0.460404944679482,0.114814448164607,1.0925470080403,1.44236856455367,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,1.6068392984416,0.096670718292122,0.308097234229289,0.15350367472613,0.275673144969061,0,0,0.0852266274161009,0,0.165284915360978,0,0,0,0.929691098594572,0,0,0,0,0,0.37064843820784,0.286249773483982,0,0.316379424718726,0,0,0.42793898803392,1.27281299170375,0.78494864019923,0,0.823611089208164,0.117812402345686,0.808729926293264,0,0,0,0.974853958525138,1.05650146756755,0,0.282810863907425,2.26016233240486,0,1.99031692572366,2.63070531152258,0.578775534266688,0.655894752046633,0,0,0,0.143411352204052,0.196498082026242,0,1.06428319221179,2.9555068941673,2.30506425071931,0,0.699869440489966,0.192444225451024,1.34060455107157,1.08890984861323,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0.667852230137435,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0.197286811273867,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.241192877250816,0,0,0,0.438770794307945,0,0,0.307801034015188,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0.530745387020035,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0,0,0.19351266257817,0.146178634172371,0.164230914106418,0.0969890164884194,0,0.225980740780532,0,0,0.126621591911757,0,0.160317640503067,0.640358984218058,0.19980960958213,0,0,0,0,0.124252535565433,0.235694034616795,0,0.209205692624666,0,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0.714695326373367,0.662091970365432,0,1.62899880526114,2.5926644736038,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,1.24271716604159,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,1.42732666772484,0.705797459094515,0,0,0.895528817321244,0.233713309847224,0.554805861502613,0.189403005275089,0.251567901752575,2.66943366478961,0.457680136793847,0.604923695052956,0.15543720058278,0.147855149989634,0.318593534327405,0,0.155262956876259,0.414706207840855,0.265841714557995,0,0,1.14241563650639,0,0.545545977607678,0.429642228169954,0,0.398095888698616,0.400027764663154,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0.179088841081487,0.308801447160972,0.219284049578707,0,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0.1635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| ||
|short_description=p@chr1:19983866..19983874,+ | |short_description=p@chr1:19983866..19983874,+ | ||
}} | }} |
Latest revision as of 01:59, 28 July 2015
Short description: | p@chr1:19983866..19983874, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:19983866..19983874, + |
Coexpression cluster: | C315_Osteoblast_Preadipocyte_mesenchymal_Smooth_Cardiac_leiomyoma_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 1.18e-11 | 2 |
smooth muscle cell of the subclavian artery | 3.48e-10 | 5 |
synovial cell | 1.99e-08 | 3 |
light melanocyte | 5.44e-08 | 3 |
prostate stromal cell | 8.58e-08 | 3 |
duct epithelial cell | 9.85e-08 | 3 |
branched duct epithelial cell | 9.85e-08 | 3 |
tracheal epithelial cell | 9.85e-08 | 3 |
tracheoblast | 9.85e-08 | 3 |
smooth muscle cell of the pulmonary artery | 7.60e-07 | 1 |
perirenal adipocyte cell | 8.97e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 8.98e-12 | 2 |
thoracic segment blood vessel | 3.48e-10 | 5 |
subclavian artery | 3.48e-10 | 5 |
stratified squamous epithelium | 1.99e-08 | 3 |
layer of synovial tissue | 1.99e-08 | 3 |
synovial joint | 1.99e-08 | 3 |
synovial membrane of synovial joint | 1.99e-08 | 3 |
trunk blood vessel | 2.12e-07 | 7 |
articulation | 1.00e-06 | 8 |
skeletal joint | 1.00e-06 | 8 |
articular system | 1.00e-06 | 8 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.76e-08 | 3 |
leiomyoma | 2.76e-08 | 3 |