FFCP PHASE1:Hg19::chr1:192458942..192458949,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:192458942..192458949,- | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_at_chr1:192458942..192458949,- | |description=CAGE_peak_at_chr1:192458942..192458949,- | ||
|id=chr1:192458942..192458949,- | |id=chr1:192458942..192458949,- | ||
|ontology_enrichment_celltype=CL:0002393!3.99e-12!9;CL:0002397!3.99e-12!9;CL:0002320!9.02e-11!365;CL:0000134!1.65e-10!358;CL:0000219!1.62e-08!390;CL:0000738!2.98e-08!140;CL:0000048!6.63e-08!430;CL:0000723!1.73e-07!436;CL:0000034!2.03e-07!444;CL:0002057!8.42e-07!42 | |ontology_enrichment_celltype=CL:0002393!3.99e-12!9;CL:0002397!3.99e-12!9;CL:0002320!9.02e-11!365;CL:0000134!1.65e-10!358;CL:0000219!1.62e-08!390;CL:0000738!2.98e-08!140;CL:0000048!6.63e-08!430;CL:0000723!1.73e-07!436;CL:0000034!2.03e-07!444;CL:0002057!8.42e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000767;4.23e-17;3!CL:0001014;2.84e-12;2!CL:0001016;2.84e-12;2!CL:0000097;1.53e-10;5!CL:0000048;3.64e-10;58!CL:0000134;1.60e-09;55!CL:0000034;2.16e-09;69!CL:0000723;3.81e-09;61!CL:0002092;1.42e-08;10!CL:0002540;1.45e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,4.25e-17,3;CL:0001014,2.84e-12,2;CL:0001016,2.84e-12,2;CL:0000097,1.51e-10,5;CL:0002028,1.51e-10,5;CL:0000134,2.38e-09,354;CL:0002320,4.90e-09,361;CL:0002092,1.34e-08,10;CL:0002540,1.34e-08,6;CL:0000034,2.35e-08,441;CL:0000048,4.95e-08,427;CL:0000219,6.17e-08,386;CL:0000723,8.03e-08,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.25e-12!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.41e-17;14!DOID:120;1.48e-08;27!DOID:193;6.65e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.61e-17,14;DOID:120,1.54e-08,27;DOID:193,6.89e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0002384!7.08e-10!375;UBERON:0001474!2.30e-08!86;UBERON:0002371!4.38e-08!80;UBERON:0002390!5.51e-07!102;UBERON:0003061!5.51e-07!102;UBERON:0000992!9.82e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002371;3.73e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.57e-09,76;UBERON:0002384,1.31e-08,371;UBERON:0001474,4.47e-08,82;UBERON:0002390,1.88e-07,98;UBERON:0003061,1.88e-07,98;UBERON:0004765,3.85e-07,90;UBERON:0002405,7.84e-07,93 | |||
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| ||
|short_description=p@chr1:192458942..192458949,- | |short_description=p@chr1:192458942..192458949,- | ||
}} | }} |
Latest revision as of 01:38, 28 July 2015
Short description: | p@chr1:192458942..192458949, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:192458942..192458949, - |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 4.25e-17 | 3 |
CD1a-positive Langerhans cell | 2.84e-12 | 2 |
immature CD1a-positive Langerhans cell | 2.84e-12 | 2 |
mast cell | 1.51e-10 | 5 |
basophil mast progenitor cell | 1.51e-10 | 5 |
mesenchymal cell | 2.38e-09 | 354 |
connective tissue cell | 4.90e-09 | 361 |
bone marrow cell | 1.34e-08 | 10 |
mesenchymal stem cell of the bone marrow | 1.34e-08 | 6 |
stem cell | 2.35e-08 | 441 |
multi fate stem cell | 4.95e-08 | 427 |
motile cell | 6.17e-08 | 386 |
somatic stem cell | 8.03e-08 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.57e-09 | 76 |
connective tissue | 1.31e-08 | 371 |
bone element | 4.47e-08 | 82 |
hematopoietic system | 1.88e-07 | 98 |
blood island | 1.88e-07 | 98 |
skeletal element | 3.85e-07 | 90 |
immune system | 7.84e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.61e-17 | 14 |
female reproductive organ cancer | 1.54e-08 | 27 |
reproductive organ cancer | 6.89e-08 | 29 |