FFCP PHASE1:Hg19::chr1:178006939..178006948,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:178006939..178006948,- | |||
|coexpression_cluster_id=C680 | |coexpression_cluster_id=C680 | ||
|description=CAGE_peak_at_chr1:178006939..178006948,- | |description=CAGE_peak_at_chr1:178006939..178006948,- | ||
|id=chr1:178006939..178006948,- | |id=chr1:178006939..178006948,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002178;2.62e-23;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.62e-23,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4929!1.51e-07!2 | |ontology_enrichment_disease=DOID:4929!1.51e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:3493;5.04e-34;2!DOID:299;1.03e-11;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,5.04e-34,2;DOID:299,1.03e-11,25 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.98e-22!115;UBERON:0001829!4.60e-08!2;UBERON:0005409!2.50e-07!35;UBERON:0000481!6.28e-07!347 | |ontology_enrichment_uberon=UBERON:0007023!1.98e-22!115;UBERON:0001829!4.60e-08!2;UBERON:0005409!2.50e-07!35;UBERON:0000481!6.28e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0000945;1.40e-14;5!UBERON:0010039;1.40e-14;5!UBERON:0005409;1.33e-12;22!UBERON:0001155;1.21e-08;9!UBERON:0004921;5.64e-08;33!UBERON:0000059;2.63e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.77e-11,25;UBERON:0000945,1.24e-09,8;UBERON:0010039,1.24e-09,8;UBERON:0001155,1.21e-08,9;UBERON:0000059,2.63e-07,11 | |||
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| ||
|short_description=p@chr1:178006939..178006948,- | |short_description=p@chr1:178006939..178006948,- | ||
}} | }} |
Latest revision as of 00:46, 28 July 2015
Short description: | p@chr1:178006939..178006948, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:178006939..178006948, - |
Coexpression cluster: | C680_gastric_signet_pineal_tubular_medulloblastoma_small_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.62e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.77e-11 | 25 |
stomach | 1.24e-09 | 8 |
food storage organ | 1.24e-09 | 8 |
colon | 1.21e-08 | 9 |
large intestine | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 5.04e-34 | 2 |
adenocarcinoma | 1.03e-11 | 25 |