FFCP PHASE1:Hg19::chr1:172820511..172820523,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:172820511..172820523,- | |||
|description=CAGE_peak_at_chr1:172820511..172820523,- | |description=CAGE_peak_at_chr1:172820511..172820523,- | ||
|id=chr1:172820511..172820523,- | |id=chr1:172820511..172820523,- | ||
|ontology_enrichment_celltype=CL:0002620!2.19e-36!23;CL:0000057!4.62e-20!75;CL:0002551!4.53e-16!6;CL:0002195!1.61e-13!2;CL:0002571!1.61e-13!2;CL:0000055!3.54e-08!180;CL:0000511!9.71e-08!1;CL:0002625!9.71e-08!1;CL:0000216!9.71e-08!1;CL:0002574!1.25e-07!1;CL:0002568!2.21e-07!1;CL:0000342!3.01e-07!1;CL:0002565!3.01e-07!1 | |ontology_enrichment_celltype=CL:0002620!2.19e-36!23;CL:0000057!4.62e-20!75;CL:0002551!4.53e-16!6;CL:0002195!1.61e-13!2;CL:0002571!1.61e-13!2;CL:0000055!3.54e-08!180;CL:0000511!9.71e-08!1;CL:0002625!9.71e-08!1;CL:0000216!9.71e-08!1;CL:0002574!1.25e-07!1;CL:0002568!2.21e-07!1;CL:0000342!3.01e-07!1;CL:0002565!3.01e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.28e-31;23!CL:0000511;6.31e-21;1!CL:0002625;6.31e-21;1!CL:0000216;6.31e-21;1!CL:0002195;3.70e-11;2!CL:0002571;3.70e-11;2 | |ontology_enrichment_celltype_v019=CL:0002620;4.28e-31;23!CL:0000511;6.31e-21;1!CL:0002625;6.31e-21;1!CL:0000216;6.31e-21;1!CL:0002195;3.70e-11;2!CL:0002571;3.70e-11;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,3.85e-31,23;CL:0000511,5.16e-21,1;CL:0002625,5.16e-21,1;CL:0000216,5.16e-21,1;CL:0002195,4.09e-11,2;CL:0002571,4.09e-11,2;CL:0000057,2.08e-09,76 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;4.83e-17;5!DOID:450;4.83e-17;5!DOID:66;4.83e-17;5!DOID:423;4.83e-17;5!DOID:0080000;4.83e-17;5!DOID:11722;4.83e-17;5 | |ontology_enrichment_disease_v019=DOID:17;4.83e-17;5!DOID:450;4.83e-17;5!DOID:66;4.83e-17;5!DOID:423;4.83e-17;5!DOID:0080000;4.83e-17;5!DOID:11722;4.83e-17;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,4.64e-17,5;DOID:450,4.64e-17,5;DOID:66,4.64e-17,5;DOID:423,4.64e-17,5;DOID:0080000,4.64e-17,5;DOID:11722,4.64e-17,5 | |||
|ontology_enrichment_uberon=UBERON:0002097!6.18e-20!40;UBERON:0002199!1.84e-17!45;UBERON:0002416!1.84e-17!45;UBERON:0003102!1.93e-11!95;UBERON:0002067!8.99e-11!9;UBERON:0004016!8.99e-11!9;UBERON:0010083!8.99e-11!9;UBERON:0001136!9.71e-08!1;UBERON:0001343!9.71e-08!1;UBERON:0004910!9.71e-08!1;UBERON:0005154!9.71e-08!1;UBERON:0005295!9.71e-08!1;UBERON:0004813!9.71e-08!1;UBERON:0005297!9.71e-08!1;UBERON:0005294!9.71e-08!1;UBERON:0010141!9.71e-08!1;UBERON:0005891!9.71e-08!1;UBERON:0002506!3.01e-07!1;UBERON:0001769!3.01e-07!1 | |ontology_enrichment_uberon=UBERON:0002097!6.18e-20!40;UBERON:0002199!1.84e-17!45;UBERON:0002416!1.84e-17!45;UBERON:0003102!1.93e-11!95;UBERON:0002067!8.99e-11!9;UBERON:0004016!8.99e-11!9;UBERON:0010083!8.99e-11!9;UBERON:0001136!9.71e-08!1;UBERON:0001343!9.71e-08!1;UBERON:0004910!9.71e-08!1;UBERON:0005154!9.71e-08!1;UBERON:0005295!9.71e-08!1;UBERON:0004813!9.71e-08!1;UBERON:0005297!9.71e-08!1;UBERON:0005294!9.71e-08!1;UBERON:0010141!9.71e-08!1;UBERON:0005891!9.71e-08!1;UBERON:0002506!3.01e-07!1;UBERON:0001769!3.01e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;6.31e-21;1!UBERON:0001343;6.31e-21;1!UBERON:0004910;6.31e-21;1!UBERON:0004813;6.31e-21;1!UBERON:0002097;5.07e-13;41!UBERON:0001905;3.70e-11;2!UBERON:0002757;3.70e-11;2!UBERON:0010134;3.70e-11;2!UBERON:0004909;3.70e-11;2!UBERON:0005408;3.70e-11;2!UBERON:0001899;3.70e-11;2!UBERON:0002199;8.15e-10;46!UBERON:0002416;8.15e-10;46!UBERON:0003102;6.38e-09;50 | |ontology_enrichment_uberon_v019=UBERON:0001136;6.31e-21;1!UBERON:0001343;6.31e-21;1!UBERON:0004910;6.31e-21;1!UBERON:0004813;6.31e-21;1!UBERON:0002097;5.07e-13;41!UBERON:0001905;3.70e-11;2!UBERON:0002757;3.70e-11;2!UBERON:0010134;3.70e-11;2!UBERON:0004909;3.70e-11;2!UBERON:0005408;3.70e-11;2!UBERON:0001899;3.70e-11;2!UBERON:0002199;8.15e-10;46!UBERON:0002416;8.15e-10;46!UBERON:0003102;6.38e-09;50 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,5.16e-21,1;UBERON:0001343,5.16e-21,1;UBERON:0004910,5.16e-21,1;UBERON:0005154,5.16e-21,1;UBERON:0005295,5.16e-21,1;UBERON:0004813,5.16e-21,1;UBERON:0005297,5.16e-21,1;UBERON:0005294,5.16e-21,1;UBERON:0010141,5.16e-21,1;UBERON:0005891,5.16e-21,1;UBERON:0002097,1.69e-17,41;UBERON:0002199,1.35e-15,46;UBERON:0002416,1.35e-15,46;UBERON:0004909,3.35e-11,2;UBERON:0001905,4.52e-11,2;UBERON:0002757,4.52e-11,2;UBERON:0010134,4.52e-11,2;UBERON:0005408,4.52e-11,2;UBERON:0001899,4.52e-11,2;UBERON:0004871,8.06e-11,8;UBERON:0003102,3.47e-07,99 | |||
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|short_description=p@chr1:172820511..172820523,- | |short_description=p@chr1:172820511..172820523,- | ||
}} | }} |
Latest revision as of 00:28, 28 July 2015
Short description: | p@chr1:172820511..172820523, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:172820511..172820523, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 3.85e-31 | 23 |
androgen binding protein secreting cell | 5.16e-21 | 1 |
seminiferous tubule epithelial cell | 5.16e-21 | 1 |
Sertoli cell | 5.16e-21 | 1 |
hepatic stem cell | 4.09e-11 | 2 |
hepatic mesenchymal stem cell | 4.09e-11 | 2 |
fibroblast | 2.08e-09 | 76 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 5.16e-21 | 1 |
seminiferous tubule of testis | 5.16e-21 | 1 |
epithelium of male gonad | 5.16e-21 | 1 |
epithelial cord | 5.16e-21 | 1 |
sex cord | 5.16e-21 | 1 |
seminiferous tubule epithelium | 5.16e-21 | 1 |
testis sex cord | 5.16e-21 | 1 |
genital ridge | 5.16e-21 | 1 |
primitive sex cord of indifferent gonad | 5.16e-21 | 1 |
coelomic epithelium | 5.16e-21 | 1 |
skin of body | 1.69e-17 | 41 |
integument | 1.35e-15 | 46 |
integumental system | 1.35e-15 | 46 |
epithelium of gonad | 3.35e-11 | 2 |
pineal body | 4.52e-11 | 2 |
regional part of epithalamus | 4.52e-11 | 2 |
secretory circumventricular organ | 4.52e-11 | 2 |
circumventricular organ | 4.52e-11 | 2 |
epithalamus | 4.52e-11 | 2 |
somatic layer of lateral plate mesoderm | 8.06e-11 | 8 |
surface structure | 3.47e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.64e-17 | 5 |
myotonic disease | 4.64e-17 | 5 |
muscle tissue disease | 4.64e-17 | 5 |
myopathy | 4.64e-17 | 5 |
muscular disease | 4.64e-17 | 5 |
myotonic dystrophy | 4.64e-17 | 5 |