FFCP PHASE1:Hg19::chr1:16939157..16939162,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:16939157..16939162,+ | |||
|description=CAGE_peak_at_chr1:16939157..16939162,+ | |description=CAGE_peak_at_chr1:16939157..16939162,+ | ||
|id=chr1:16939157..16939162,+ | |id=chr1:16939157..16939162,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000322;2.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,2.97e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!9.23e-26!235;DOID:14566!1.49e-25!239;DOID:0050687!1.57e-22!143;DOID:305!6.10e-19!106;DOID:0050686!2.25e-13!137;DOID:1749!9.27e-09!14;DOID:299!4.21e-08!25;DOID:3093!2.63e-07!11;DOID:3119!7.79e-07!14 | |ontology_enrichment_disease=DOID:162!9.23e-26!235;DOID:14566!1.49e-25!239;DOID:0050687!1.57e-22!143;DOID:305!6.10e-19!106;DOID:0050686!2.25e-13!137;DOID:1749!9.27e-09!14;DOID:299!4.21e-08!25;DOID:3093!2.63e-07!11;DOID:3119!7.79e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:1325;2.83e-11;7!DOID:3904;2.83e-11;7!DOID:4074;2.37e-10;2!DOID:4905;2.37e-10;2!DOID:3910;2.37e-10;2!DOID:4468;2.37e-10;2!DOID:3498;2.37e-10;2!DOID:3307;2.37e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,2.69e-11,7;DOID:3904,2.69e-11,7;DOID:3307,1.57e-10,2;DOID:4074,2.07e-10,2;DOID:4905,2.07e-10,2;DOID:3498,2.07e-10,2;DOID:3910,2.99e-10,2;DOID:4468,3.58e-10,2;DOID:0050687,1.31e-07,143;DOID:162,5.94e-07,235;DOID:14566,8.62e-07,239 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.37e-10;2!UBERON:0002173;2.37e-10;2!UBERON:0002186;2.37e-10;2!UBERON:0004821;2.55e-07;3!UBERON:0007499;2.55e-07;3!UBERON:0003215;2.55e-07;3!UBERON:0010368;2.55e-07;3!UBERON:0009911;2.55e-07;3!UBERON:0002299;2.55e-07;3!UBERON:0006524;2.55e-07;3!UBERON:0008874;2.55e-07;3!UBERON:0002169;2.55e-07;3!UBERON:0004894;2.55e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.99e-10,2;UBERON:0002173,2.99e-10,2;UBERON:0002186,2.99e-10,2;UBERON:0004821,2.97e-07,3;UBERON:0003215,2.97e-07,3;UBERON:0010368,2.97e-07,3;UBERON:0009911,2.97e-07,3;UBERON:0002299,2.97e-07,3;UBERON:0006524,2.97e-07,3;UBERON:0008874,2.97e-07,3;UBERON:0002169,2.97e-07,3;UBERON:0004894,2.97e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232401601740905,0.853015394924529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0.252433774244115,0,0.161646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0.358234090811393,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462629081407967,0,0.164254312027618,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0.255225424989168,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70918513803957,0,0.245040215981032,0,0.28853842595289,0,0.478278818186467,0,0.191505370132367,0,0,0,0.456469358066384,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0.121360521749513,0,1.13654458722565,0,0,0,0,0,0,0,2.74463030566391,0,0,0,0,0.492339221844278,0,0.449341755736634,0,0,0,0,0,0,0.0927680981618513,0,0,0.262379999988587,0,0.568967241427498,0,1.89110145414349,0,0.583209226766509,0,0,0,0,0,0.295547618953547,0,1.0893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13852239634511,0.158936578980379,1.05499032264014,0,0.141353071433941,0.216388639742091,0,0,0,0.296521128680622,0,0,0,0,0,0,0.19566461893209,1.45668227720456,0,0,0,0,0.300646838828985,0.103688191397247,0,0,0.627865836814451,0,0.569219092059585,0.138674673013139,0.173559738335131,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.548167698587004,0,0,0,0.0801588202515337,0.213452994739353,0.799238438328521,0.144090417154106,0.229073192331831,0.343189995723929,0.14405479798815,0.124252535565433,0,0.67952103036807,0.104602846312333,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338693328263138,0.795229689809303,0,0,0,0,0,0.77380195455795,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.574647645245373,0,0.113312091520126,0,0,0,0.26446520348538,0,0,0.106787412567695,0,0,0.496166021811951,0.197611631897944,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.830091809617385,0.624902039810533,0.151649117541648,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0.310525913752519,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0.192914038270915,0,0,0,0,0,0.194860308839388,0,0.327130788511688,0.327609848846413,0,0.211312123358627,0,0.106691729694141,0.172214979660816,0,0,0,0,0.127894371303652,0,1.25812753484717,0.327628914576042,0,0,0.123935764259002,0.558644917973244,0.318004350653419,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0.0981477185010256,0.353909170043221,0,0.808679663052368,0,0,0,0.0752103283492573,0,0,0.261906694481422,0.655087670040387,0.295712172434091,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0.236387681767936,0.444925607568277,0,0,0,0,0,0,0.0714765441766563,0.47404083519818,0.116241425368125,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0.223710863595585,0.098150233615243,0,0,0,0,0,0,0,0,0.5647304101948,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0.178553938605658,0,0.0802413666891683,0,0,0,0.315543124386369,0.0679914901909147,0,0,0,0,0,0.504665699340316,0.546327859818478,0.126698501011437,0.101988829741982,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0.89543595472072,0,1.9307228228694,0.269475606319761,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232401601740905,0.853015394924529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0.252433774244115,0,0.161646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0.358234090811393,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462629081407967,0,0.164254312027618,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0.255225424989168,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70918513803957,0,0.245040215981032,0,0.28853842595289,0,0.478278818186467,0,0.191505370132367,0,0,0,0.456469358066384,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0.121360521749513,0,1.13654458722565,0,0,0,0,0,0,0,2.74463030566391,0,0,0,0,0.492339221844278,0,0.449341755736634,0,0,0,0,0,0,0.0927680981618513,0,0,0.262379999988587,0,0.568967241427498,0,1.89110145414349,0,0.583209226766509,0,0,0,0,0,0.295547618953547,0,1.0893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13852239634511,0.158936578980379,1.05499032264014,0,0.141353071433941,0.216388639742091,0,0,0,0.296521128680622,0,0,0,0,0,0,0.19566461893209,1.45668227720456,0,0,0,0,0.300646838828985,0.103688191397247,0,0,0.627865836814451,0,0.569219092059585,0.138674673013139,0.173559738335131,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.548167698587004,0,0,0,0.0801588202515337,0.213452994739353,0.799238438328521,0.144090417154106,0.229073192331831,0.343189995723929,0.14405479798815,0.124252535565433,0,0.67952103036807,0.104602846312333,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338693328263138,0.795229689809303,0,0,0,0,0,0.77380195455795,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.574647645245373,0,0.113312091520126,0,0,0,0.26446520348538,0,0,0.106787412567695,0,0,0.496166021811951,0.197611631897944,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.830091809617385,0.624902039810533,0.151649117541648,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0.310525913752519,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0.192914038270915,0,0,0,0,0,0.194860308839388,0,0.327130788511688,0.327609848846413,0,0.211312123358627,0,0.106691729694141,0.172214979660816,0,0,0,0,0.127894371303652,0,1.25812753484717,0.327628914576042,0,0,0.123935764259002,0.558644917973244,0.318004350653419,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0.0981477185010256,0.353909170043221,0,0.808679663052368,0,0,0,0.0752103283492573,0,0,0.261906694481422,0.655087670040387,0.295712172434091,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0,0.115233987555779,0,0.0679697329768317,0,0.236387681767936,0.444925607568277,0,0,0,0,0,0,0.0714765441766563,0.47404083519818,0.116241425368125,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0,0.223710863595585,0.098150233615243,0,0,0,0,0,0,0,0,0.5647304101948,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0.178553938605658,0,0.0802413666891683,0,0,0,0.315543124386369,0.0679914901909147,0,0,0,0,0,0.504665699340316,0.546327859818478,0.126698501011437,0.101988829741982,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0.89543595472072,0,1.9307228228694,0.269475606319761,0,0,0,0,0,0 | ||
|short_description=p@chr1:16939157..16939162,+ | |short_description=p@chr1:16939157..16939162,+ | ||
}} | }} |
Latest revision as of 00:11, 28 July 2015
Short description: | p@chr1:16939157..16939162, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:16939157..16939162, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 2.99e-10 | 2 |
alveolar duct | 2.99e-10 | 2 |
bronchiole | 2.99e-10 | 2 |
pulmonary alveolus epithelium | 2.97e-07 | 3 |
alveolus | 2.97e-07 | 3 |
pulmonary lobule | 2.97e-07 | 3 |
lobule | 2.97e-07 | 3 |
alveolus of lung | 2.97e-07 | 3 |
alveolar system | 2.97e-07 | 3 |
pulmonary acinus | 2.97e-07 | 3 |
alveolar sac | 2.97e-07 | 3 |
alveolar wall | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 2.69e-11 | 7 |
bronchogenic carcinoma | 2.69e-11 | 7 |
teratoma | 1.57e-10 | 2 |
pancreas adenocarcinoma | 2.07e-10 | 2 |
pancreatic carcinoma | 2.07e-10 | 2 |
pancreatic ductal adenocarcinoma | 2.07e-10 | 2 |
lung adenocarcinoma | 2.99e-10 | 2 |
clear cell adenocarcinoma | 3.58e-10 | 2 |
cell type cancer | 1.31e-07 | 143 |
cancer | 5.94e-07 | 235 |
disease of cellular proliferation | 8.62e-07 | 239 |