FFCP PHASE1:Hg19::chr1:160881636..160881640,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:160881636..160881640,+ | |||
|coexpression_cluster_id=C91 | |||
|description=CAGE_peak_at_chr1:160881636..160881640,+ | |description=CAGE_peak_at_chr1:160881636..160881640,+ | ||
|id=chr1:160881636..160881640,+ | |id=chr1:160881636..160881640,+ | ||
|ontology_enrichment_celltype=CL:0002494!4.44e-11!16;CL:0000077!5.99e-10!19;CL:0000746!1.58e-08!3;CL:0000513!1.58e-08!3;CL:0000222!2.72e-08!119;CL:0002548!4.96e-07!6 | |ontology_enrichment_celltype=CL:0002494!4.44e-11!16;CL:0000077!5.99e-10!19;CL:0000746!1.58e-08!3;CL:0000513!1.58e-08!3;CL:0000222!2.72e-08!119;CL:0002548!4.96e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000077;2.03e-20;19!CL:0002195;9.83e-14;2!CL:0002571;9.83e-14;2!CL:0000632;2.10e-09;3!CL:0000746;3.69e-09;3!CL:0002616;7.03e-08;1!CL:0002557;1.04e-07;1!CL:1000306;1.46e-07;4!CL:0002547;1.46e-07;4!CL:0002581;2.24e-07;1!CL:0000737;4.47e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.03e-20,19;CL:0002195,9.83e-14,2;CL:0002571,9.83e-14,2;CL:0000632,1.89e-09,3;CL:0000746,4.18e-09,3;CL:0000513,4.18e-09,3;CL:0002616,7.76e-08,1;CL:0002557,1.07e-07,1;CL:1000306,1.44e-07,4;CL:0002547,1.44e-07,4;CL:0002581,1.69e-07,1;CL:0000737,4.91e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000513;3.69e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!8.94e-19!118;UBERON:0004872!1.22e-16!84;UBERON:0000948!1.66e-14!24;UBERON:0005498!1.66e-14!24;UBERON:0004140!1.66e-14!24;UBERON:0009881!1.66e-14!24;UBERON:0004141!1.66e-14!24;UBERON:0003084!1.66e-14!24;UBERON:0007005!1.66e-14!24;UBERON:0004139!1.66e-14!24;UBERON:0004291!1.66e-14!24;UBERON:0007100!1.53e-12!27;UBERON:0004535!5.13e-11!110;UBERON:0001009!1.57e-10!113;UBERON:0001981!6.35e-10!60;UBERON:0007500!6.35e-10!60;UBERON:0004537!6.35e-10!60;UBERON:0006965!6.35e-10!60;UBERON:0000025!4.61e-09!194;UBERON:0000490!5.82e-09!138;UBERON:0001048!4.68e-08!168;UBERON:0000055!4.94e-08!69;UBERON:0002066!2.20e-07!5;UBERON:0002049!2.35e-07!79;UBERON:0007798!2.35e-07!79;UBERON:0000483!2.61e-07!309;UBERON:0000119!3.93e-07!312;UBERON:0000060!5.03e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;1.44e-13;2!UBERON:0002107;4.27e-08;19!UBERON:0006925;4.27e-08;19!UBERON:0004797;1.46e-07;4!UBERON:0000415;1.46e-07;4!UBERON:0007240;1.46e-07;4!UBERON:0005742;1.46e-07;4!UBERON:0005734;1.46e-07;4!UBERON:0004664;1.46e-07;4!UBERON:0004663;1.46e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,1.19e-13,2;UBERON:0002107,4.15e-08,19;UBERON:0006925,4.15e-08,19;UBERON:0008836,4.15e-08,19;UBERON:0003914,9.64e-08,117;UBERON:0000415,1.44e-07,4;UBERON:0007240,1.44e-07,4;UBERON:0005742,1.44e-07,4;UBERON:0005734,1.44e-07,4;UBERON:0004664,1.44e-07,4;UBERON:0004663,1.44e-07,4;UBERON:0008835,5.71e-07,22;UBERON:0003894,5.71e-07,22 | |||
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|phase1_expression=0,0,0.422863212287913,0,0,5.23403114460221,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,1.15076305659177,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0.25326102332916,28.3355646940288,5.44989579422746,0,0,1.06748995729705,0,5.60179863719579,0.942974704487816,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51639767796065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,9.4662022606222,1.47008711385542,0,0,0,0,1.47586126251736,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,3.86040582876998,0.542621605391443,0,0,3.19852753868291,0,5.42590878707255,4.35766729300147,4.39881161201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,1.48418066444991,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.0886737021865,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5740617341532,0,0,0,0,0,2.57624796135584,0,0,0.762520775695299,2.81487570442467,0.42793898803392,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0.551365343546124,0,0.876901770507525,0,0,0,0,0,0.430234056612155,0.196498082026242,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.0897576444097721,1.08647371922008,0,1.00757352742049,0,0,0,0,0,0,0,0,0.476809736941136,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0.717873024576814,0,0,0,0.0671834724867263,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0.318593534327405,0,0,0,0,0,1.05180326298053,17.8978449719334,0,0,0,1.39210127963548,0.796191777397232,0,0,0,0,0.192619830407303,3.64550705337374,0,1.36023555307363,0,0,0,0,10.7449184293566,0,2.50788249752189,0,0,8.29032820154877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0.803892390468535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:160881636..160881640,+ | |short_description=p@chr1:160881636..160881640,+ | ||
}} | }} |
Latest revision as of 23:28, 27 July 2015
Short description: | p@chr1:160881636..160881640, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:160881636..160881640, + |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.03e-20 | 19 |
hepatic stem cell | 9.83e-14 | 2 |
hepatic mesenchymal stem cell | 9.83e-14 | 2 |
hepatic stellate cell | 1.89e-09 | 3 |
cardiac muscle cell | 4.18e-09 | 3 |
cardiac muscle myoblast | 4.18e-09 | 3 |
perirenal adipocyte cell | 7.76e-08 | 1 |
fibroblast of pulmonary artery | 1.07e-07 | 1 |
fibroblast of tunica adventitia of artery | 1.44e-07 | 4 |
fibroblast of the aortic adventitia | 1.44e-07 | 4 |
perirenal preadipocyte | 1.69e-07 | 1 |
striated muscle cell | 4.91e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 1.19e-13 | 2 |
liver | 4.15e-08 | 19 |
digestive gland | 4.15e-08 | 19 |
liver bud | 4.15e-08 | 19 |
epithelial tube | 9.64e-08 | 117 |
artery wall | 1.44e-07 | 4 |
tunica adventitia of artery | 1.44e-07 | 4 |
adventitia | 1.44e-07 | 4 |
tunica adventitia of blood vessel | 1.44e-07 | 4 |
aorta tunica adventitia | 1.44e-07 | 4 |
aorta wall | 1.44e-07 | 4 |
hepatic diverticulum | 5.71e-07 | 22 |
liver primordium | 5.71e-07 | 22 |