FFCP PHASE1:Hg19::chr1:156621459..156621474,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:156621459..156621474,- | |||
|coexpression_cluster_id=C1816 | |coexpression_cluster_id=C1816 | ||
|description=CAGE_peak_at_chr1:156621459..156621474,- | |description=CAGE_peak_at_chr1:156621459..156621474,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000148;7.29e-11;10!CL:0000147;5.00e-08;14 | |ontology_enrichment_celltype_v019=CL:0000148;7.29e-11;10!CL:0000147;5.00e-08;14 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,7.30e-11,10;CL:0000541,7.30e-11,10;CL:0000147,5.00e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.01e-09;3!UBERON:0003057;1.01e-09;3!UBERON:0006215;1.47e-09;3 | |ontology_enrichment_development_v019=UBERON:0006241;1.01e-09;3!UBERON:0003057;1.01e-09;3!UBERON:0006215;1.47e-09;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p@chr1:156621459..156621474,- | |short_description=p@chr1:156621459..156621474,- | ||
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Latest revision as of 22:41, 27 July 2015
Short description: | p@chr1:156621459..156621474, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:156621459..156621474, - |
Coexpression cluster: | C1816_spinal_Melanocyte_brain_hippocampus_amygdala_corpus_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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melanocyte | 7.30e-11 | 10 |
melanoblast | 7.30e-11 | 10 |
pigment cell | 5.00e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 1.01e-09 | 3 |
dorsal region element | 1.01e-09 | 3 |
dorsum | 1.01e-09 | 3 |
duodenum | 1.41e-09 | 2 |
central nervous system | 1.03e-07 | 81 |
posterior neural tube | 1.18e-07 | 15 |
chordal neural plate | 1.18e-07 | 15 |
neural tube | 2.20e-07 | 56 |
neural rod | 2.20e-07 | 56 |
future spinal cord | 2.20e-07 | 56 |
neural keel | 2.20e-07 | 56 |
nervous system | 5.66e-07 | 89 |