FFCP PHASE1:Hg19::chr1:155954270..155954294,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:155954270..155954294,- | |||
|coexpression_cluster_id=C184 | |||
|description=CAGE_peak_at_chr1:155954270..155954294,- | |||
|id=chr1:155954270..155954294,- | |||
|ontology_enrichment_celltype=CL:0002322!3.85e-12!5;CL:0002076!1.41e-09!43;CL:0000223!5.94e-09!59;CL:0000066!1.25e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.97e-18;5!CL:0002368;7.40e-11;13!CL:0000307;9.44e-09;3!CL:0000039;4.53e-08;7!CL:0000586;4.53e-08;7!CL:0000167;1.45e-07;1!CL:0000164;1.45e-07;1!CL:0000502;1.45e-07;1!CL:0000172;1.45e-07;1!CL:0000173;1.45e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.17e-18,5;CL:0002368,7.48e-11,13;CL:0000066,3.81e-09,253;CL:0000068,8.74e-09,3;CL:0000069,8.74e-09,3;CL:0000307,8.74e-09,3;CL:0000377,8.74e-09,3;CL:0000039,3.83e-08,7;CL:0000586,3.83e-08,7;CL:0002076,1.15e-07,42;CL:0000167,1.46e-07,1;CL:0000164,1.46e-07,1;CL:0000502,1.46e-07,1;CL:0000172,1.46e-07,1;CL:0000173,1.46e-07,1;CL:0002351,1.46e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.96e-09;10!UBERON:0005564;1.96e-09;10!CL:0000377;9.44e-09;3!CL:0002351;1.45e-07;1 | |||
|ontology_enrichment_disease=DOID:305!1.54e-08!106;DOID:0050687!1.00e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3493;4.83e-13;2!DOID:4430;1.45e-07;1!DOID:0050619;1.75e-07;1!DOID:1357;1.75e-07;1!DOID:5409;4.92e-07;4!DOID:3111;6.87e-07;1!DOID:3603;6.87e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,4.70e-13,2;DOID:305,5.42e-08,106;DOID:4430,1.46e-07,1;DOID:0050619,1.75e-07,1;DOID:1357,1.75e-07,1;DOID:5409,4.85e-07,4;DOID:3111,9.73e-07,1;DOID:3603,9.73e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000464!3.23e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;1.75e-07;1!UBERON:0001825;1.75e-07;1!UBERON:0000922;2.48e-07;49!UBERON:0000473;4.10e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,1.75e-07,1;UBERON:0001825,1.75e-07,1;UBERON:0000473,3.54e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07355300420312,1.06023814657188,1.62671520017326,1.0366105501537,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,1.1240175325762,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.644566922551274,0,0,0,2.25599806453706,0.770153371044148,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4875642382488,0.192190067365106,0,1.0115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30933070541229,0,2.17781969722645,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0.260427761085233,0,0,0.1137934482855,0,0,0.689486746482929,0,0.173624994933292,0,0,0,0,0,0,0,0.139423744278603,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0.586993856796269,0,0,1.20990716048664,0,0,1.20258735531594,0.103688191397247,0.664653872707185,0,0,0,7.39984819677461,0,0.173559738335131,0,0,0.873633341210151,0,0,0.146178634172371,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4846354574708,0,0,0.0674035438541849,0,0,0,0,0.160753148465019,0.687697182986169,1.24632101408756,0,0,0.0607495566580247,0,0.630445658393585,3.25218446436988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0.314408610199332,0,0,0,0.365377795142688,0.638341257770182,0,0,0,0,15.5483555287732,0,0,0,0,0,0,0,0,0,0,0,0,1.30428925749743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05656061679314,0,0,0,0,0,1.11903606175556,0,0.127894371303652,0,0.157265941855896,0,0,0,0,0,0,0,0.80057074828547,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0.511049710558381,0,0,0.606965604236632,1.13831095675649,0,0,0,0,0,0,0,0,0.157115589916002,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,2.06196181689645,0,0,0,9.61872289429381,3.77945567445035,0,0,0,0,1.16969731731053,0,0,7.9062257427272,0,25.5127205627678,0,0.218559560503957,19.753326447184,0,46.1926032319187,0,0,0,0,0,0,0,1.42843150884526,0,0.0802413666891683,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,1.73381010561369,4.00826107898341,5.51369397209069,0,0.151557396436479,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr1:155954270..155954294,- | |||
}} |
Latest revision as of 22:25, 27 July 2015
Short description: | p@chr1:155954270..155954294, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:155954270..155954294, - |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.17e-18 | 5 |
respiratory epithelial cell | 7.48e-11 | 13 |
epithelial cell | 3.81e-09 | 253 |
duct epithelial cell | 8.74e-09 | 3 |
branched duct epithelial cell | 8.74e-09 | 3 |
tracheal epithelial cell | 8.74e-09 | 3 |
tracheoblast | 8.74e-09 | 3 |
germ line cell | 3.83e-08 | 7 |
germ cell | 3.83e-08 | 7 |
endo-epithelial cell | 1.15e-07 | 42 |
peptide hormone secreting cell | 1.46e-07 | 1 |
enteroendocrine cell | 1.46e-07 | 1 |
type D enteroendocrine cell | 1.46e-07 | 1 |
somatostatin secreting cell | 1.46e-07 | 1 |
pancreatic D cell | 1.46e-07 | 1 |
progenitor cell of endocrine pancreas | 1.46e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 1.75e-07 | 1 |
paranasal sinus | 1.75e-07 | 1 |
testis | 3.54e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.70e-13 | 2 |
carcinoma | 5.42e-08 | 106 |
somatostatinoma | 1.46e-07 | 1 |
paranasal sinus cancer | 1.75e-07 | 1 |
maxillary sinus cancer | 1.75e-07 | 1 |
lung small cell carcinoma | 4.85e-07 | 4 |
cystadenocarcinoma | 9.73e-07 | 1 |
mucinous cystadenocarcinoma | 9.73e-07 | 1 |