FFCP PHASE1:Hg19::chr1:153507102..153507116,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:153507102..153507116,- | |||
|description=CAGE_peak_at_chr1:153507102..153507116,- | |description=CAGE_peak_at_chr1:153507102..153507116,- | ||
|id=chr1:153507102..153507116,- | |id=chr1:153507102..153507116,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002621;6.40e-09;3!CL:0002601;2.35e-07;1!CL:0002252;3.36e-07;1!CL:0002336;7.77e-07;1!CL:0002261;7.77e-07;1!CL:0002574;7.77e-07;1!CL:0002170;7.77e-07;1!CL:0002599;7.77e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,6.42e-09,3;CL:0002601,2.50e-07,1;CL:0002252,3.57e-07,1;CL:0002599,3.78e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.40e-08;3!UBERON:0003353;1.40e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;3.36e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,3.36e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;6.40e-09;3!UBERON:0001043;1.57e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,6.42e-09,3;UBERON:0001043,1.02e-08,3;UBERON:0009143,1.02e-08,3 | |||
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| ||
|short_description=p@chr1:153507102..153507116,- | |short_description=p@chr1:153507102..153507116,- | ||
}} | }} |
Latest revision as of 21:42, 27 July 2015
Short description: | p@chr1:153507102..153507116, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:153507102..153507116, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 6.42e-09 | 3 |
uterine smooth muscle cell | 2.50e-07 | 1 |
epithelial cell of esophagus | 3.57e-07 | 1 |
smooth muscle cell of the esophagus | 3.78e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 6.42e-09 | 3 |
esophagus | 1.02e-08 | 3 |
esophageal region | 1.02e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 3.36e-07 | 1 |