FFCP PHASE1:Hg19::chr1:152747609..152747621,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:152747609..152747621,+ | |||
|coexpression_cluster_id=C420 | |||
|description=CAGE_peak_at_chr1:152747609..152747621,+ | |description=CAGE_peak_at_chr1:152747609..152747621,+ | ||
|id=chr1:152747609..152747621,+ | |id=chr1:152747609..152747621,+ | ||
|ontology_enrichment_celltype=CL:0000223!7.10e-13!59;CL:0002076!5.08e-12!43;CL:0000622!1.60e-09!5;CL:0002368!3.66e-09!13;CL:0000154!8.04e-08!6;CL:0002539!1.25e-07!10;CL:0002159!1.26e-07!13 | |ontology_enrichment_celltype=CL:0000223!7.10e-13!59;CL:0002076!5.08e-12!43;CL:0000622!1.60e-09!5;CL:0002368!3.66e-09!13;CL:0000154!8.04e-08!6;CL:0002539!1.25e-07!10;CL:0002159!1.26e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000622;6.93e-20;5!CL:0000154;1.56e-16;6!CL:0002621;4.98e-13;3!CL:0002623;8.25e-13;3!CL:0002582;1.98e-12;3!CL:0000362;4.49e-11;9!CL:0000150;6.25e-11;9!CL:0002327;3.37e-10;4!CL:0002159;1.03e-09;14!CL:0002251;3.89e-09;20!CL:0000317;8.32e-09;2!CL:1000448;8.32e-09;2!CL:0002308;8.32e-09;2!CL:0002140;8.32e-09;2!CL:0002076;1.57e-08;42!CL:0000312;5.13e-08;5!CL:0002573;7.48e-07;2!CL:0000240;9.68e-07;6!CL:0000311;9.68e-07;6!CL:0000079;9.68e-07;6!CL:0000237;9.68e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,8.63e-20,5;CL:0000154,1.87e-16,6;CL:0002621,4.69e-13,3;CL:0002623,1.01e-12,3;CL:0002582,2.15e-12,3;CL:0002076,4.29e-11,42;CL:0000362,4.69e-11,9;CL:0000150,7.03e-11,9;CL:0002327,3.43e-10,4;CL:0002159,1.20e-09,14;CL:0002251,4.07e-09,20;CL:0000317,8.50e-09,2;CL:1000448,8.50e-09,2;CL:0002308,8.50e-09,2;CL:0002140,8.50e-09,2;CL:0000312,5.32e-08,5;CL:0000223,2.32e-07,58;CL:0002573,7.48e-07,2;CL:0000240,9.97e-07,6;CL:0000311,9.97e-07,6;CL:0000079,9.97e-07,6;CL:0000237,9.97e-07,6;CL:0000036,9.97e-07,6;CL:0000357,9.97e-07,6;CL:0000114,9.97e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000357;9.68e-07;6!CL:0000114;9.68e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!2.15e-12!95;UBERON:0004237!1.25e-07!10;UBERON:0004695!1.25e-07!10;UBERON:0002111!1.25e-07!10;UBERON:0004178!1.25e-07!10;UBERON:0002199!1.52e-07!45;UBERON:0002416!1.52e-07!45;UBERON:0000165!2.58e-07!28;UBERON:0000930!2.58e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;4.98e-13;3!UBERON:0001911;3.37e-10;4!UBERON:0000161;1.14e-09;19!UBERON:0000166;1.14e-09;19!UBERON:0001003;2.85e-09;15!UBERON:0007376;2.85e-09;15!UBERON:0010371;4.59e-09;31!UBERON:0002419;8.32e-09;2!UBERON:0007771;8.32e-09;2!UBERON:0003297;8.32e-09;2!UBERON:0001821;8.32e-09;2!UBERON:0003487;8.32e-09;2!UBERON:0001820;8.32e-09;2!UBERON:0000165;5.31e-08;28!UBERON:0002365;4.27e-07;31!UBERON:0002330;4.27e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,4.69e-13,3;UBERON:0003102,2.57e-11,99;UBERON:0000166,1.73e-10,22;UBERON:0001911,3.43e-10,4;UBERON:0005333,3.43e-10,4;UBERON:0008425,3.43e-10,4;UBERON:0005311,3.43e-10,4;UBERON:0001003,2.94e-09,15;UBERON:0007376,2.94e-09,15;UBERON:0007383,2.94e-09,15;UBERON:0002419,8.50e-09,2;UBERON:0007771,8.50e-09,2;UBERON:0003297,8.50e-09,2;UBERON:0001821,8.50e-09,2;UBERON:0003487,8.50e-09,2;UBERON:0001820,8.50e-09,2;UBERON:0005089,8.50e-09,2;UBERON:0005088,8.50e-09,2;UBERON:0000165,1.21e-07,29;UBERON:0000930,1.21e-07,29;UBERON:0000161,2.02e-07,36;UBERON:0002365,3.88e-07,31;UBERON:0002330,3.88e-07,31;UBERON:0002199,6.61e-07,46;UBERON:0002416,6.61e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0.261185628199839,0,0,0,0,0,0,0,1.20538905604795,0,0.487932798790507,0,0,0,0,0,0,0.61130724598361,0.492603536699674,0.472264687882075,0,0,0,0,0.90361775633475,0.739508020333575,0.46480320348181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624320153660641,0,13.5998299302139,0,0,0,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0.554128230968366,0,0,0,0,0,0,0.847727604638247,0,0.206105058476878,0,0,0.337552664482532,0,0,0.0920498986422993,0,0,0,0,6.76412986071539,8.72787585890671,4.30206893083506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.0720547984561,6.74410519545717,3.11639814476056,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00789276919316,0.708875486211932,5.0152772713595,21.7975453885471,85.8777201330073,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01346914667305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553107505625109,0.434418072340414,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,2.48586415438378,3.28508624055237,2.07701771673448,2.44041794765914,0,0.200506470303285,1.28913384510255,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,5.20048196829217,0,0,0,0,0,0,0,0,0,0.991709492165869,4.03599141466723,0.510450849978337,2.93357564481095,5.57814659156743,2.20368642781448,1.3940745403212,0.308033580176089,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0.35667105148125,40.0880002399775,0,0,0,0,0.288666338176536,1.34060455107157,1.08890984861323,0,0,3.36942951335251,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,1.22439575525196,0,0.211125408127993,0,0,0,0.920418142519393,1.47701766553283,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,22.3077990845765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0.104421949505455,0,0,0,0,0.19566461893209,0.728341138602278,0,0,0,0,0.300646838828985,0.103688191397247,0,0,0,0,0,0.416024019039416,0,0,0,0.17472666824203,0,0,0,0,0,0,0,1.09633539717401,0,0,0,0.0801588202515337,0,0.599428828746391,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0.199679000498991,0.429226048136571,0,0,0,0,0.157566364614447,0.0824158583811665,0.13480708770837,0.688992370603241,0,0,0,0,0,0,0,0,0,14.0882568791692,0,0,0,0,0,0,0,0.25426853765475,1.08599920350743,0,20.2484163267834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38582807654183,0,0,0.690860683462397,0,0,2.14346339723327,0.531459361253452,0.490696182767533,0,0,0,0.79994958341972,0,0,0,0.184105950251841,6.43445735509445,4.35454082023081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.507339523162,0,0,0,0,1.3807198521202,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,13.3977018165109,0,0,0,0,0,0,0.177404740325278,0.345701962667338,0,0,0,0,0,0,0,0,0,0.863710364874486,0,0,0,0,0,0,1.03608082081518,4.26796192734875,117.514142508396,0,1319.756804148,1393.9208750503,0,0,0,0,0,0,0,0,0,0,56.3424751948602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.6415948624516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0.870866991587845,1.02669990325584,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0.261185628199839,0,0,0,0,0,0,0,1.20538905604795,0,0.487932798790507,0,0,0,0,0,0,0.61130724598361,0.492603536699674,0.472264687882075,0,0,0,0,0.90361775633475,0.739508020333575,0.46480320348181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624320153660641,0,13.5998299302139,0,0,0,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0.554128230968366,0,0,0,0,0,0,0.847727604638247,0,0.206105058476878,0,0,0.337552664482532,0,0,0.0920498986422993,0,0,0,0,6.76412986071539,8.72787585890671,4.30206893083506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.0720547984561,6.74410519545717,3.11639814476056,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00789276919316,0.708875486211932,5.0152772713595,21.7975453885471,85.8777201330073,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01346914667305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553107505625109,0.434418072340414,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,2.48586415438378,3.28508624055237,2.07701771673448,2.44041794765914,0,0.200506470303285,1.28913384510255,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,5.20048196829217,0,0,0,0,0,0,0,0,0,0.991709492165869,4.03599141466723,0.510450849978337,2.93357564481095,5.57814659156743,2.20368642781448,1.3940745403212,0.308033580176089,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0.35667105148125,40.0880002399775,0,0,0,0,0.288666338176536,1.34060455107157,1.08890984861323,0,0,3.36942951335251,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0,1.22439575525196,0,0.211125408127993,0,0,0,0.920418142519393,1.47701766553283,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,22.3077990845765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0.104421949505455,0,0,0,0,0.19566461893209,0.728341138602278,0,0,0,0,0.300646838828985,0.103688191397247,0,0,0,0,0,0.416024019039416,0,0,0,0.17472666824203,0,0,0,0,0,0,0,1.09633539717401,0,0,0,0.0801588202515337,0,0.599428828746391,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0.199679000498991,0.429226048136571,0,0,0,0,0.157566364614447,0.0824158583811665,0.13480708770837,0.688992370603241,0,0,0,0,0,0,0,0,0,14.0882568791692,0,0,0,0,0,0,0,0.25426853765475,1.08599920350743,0,20.2484163267834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38582807654183,0,0,0.690860683462397,0,0,2.14346339723327,0.531459361253452,0.490696182767533,0,0,0,0.79994958341972,0,0,0,0.184105950251841,6.43445735509445,4.35454082023081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.507339523162,0,0,0,0,1.3807198521202,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,13.3977018165109,0,0,0,0,0,0,0.177404740325278,0.345701962667338,0,0,0,0,0,0,0,0,0,0.863710364874486,0,0,0,0,0,0,1.03608082081518,4.26796192734875,117.514142508396,0,1319.756804148,1393.9208750503,0,0,0,0,0,0,0,0,0,0,56.3424751948602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.6415948624516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0,0.870866991587845,1.02669990325584,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0.320568492303233 | ||
|short_description=p@chr1:152747609..152747621,+ | |short_description=p@chr1:152747609..152747621,+ | ||
}} | }} |
Latest revision as of 21:36, 27 July 2015
Short description: | p@chr1:152747609..152747621, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:152747609..152747621, + |
Coexpression cluster: | C420_schwannoma_salivary_Mammary_skin_squamous_Smooth_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 8.63e-20 | 5 |
protein secreting cell | 1.87e-16 | 6 |
gingival epithelial cell | 4.69e-13 | 3 |
acinar cell of salivary gland | 1.01e-12 | 3 |
visceral preadipocyte | 2.15e-12 | 3 |
endo-epithelial cell | 4.29e-11 | 42 |
epidermal cell | 4.69e-11 | 9 |
glandular epithelial cell | 7.03e-11 | 9 |
mammary gland epithelial cell | 3.43e-10 | 4 |
general ecto-epithelial cell | 1.20e-09 | 14 |
epithelial cell of alimentary canal | 4.07e-09 | 20 |
sebum secreting cell | 8.50e-09 | 2 |
epithelial cell of sweat gland | 8.50e-09 | 2 |
epithelial cell of skin gland | 8.50e-09 | 2 |
acinar cell of sebaceous gland | 8.50e-09 | 2 |
keratinocyte | 5.32e-08 | 5 |
endodermal cell | 2.32e-07 | 58 |
Schwann cell | 7.48e-07 | 2 |
stratified squamous epithelial cell | 9.97e-07 | 6 |
keratin accumulating cell | 9.97e-07 | 6 |
stratified epithelial cell | 9.97e-07 | 6 |
keratinizing barrier epithelial cell | 9.97e-07 | 6 |
epithelial fate stem cell | 9.97e-07 | 6 |
stratified epithelial stem cell | 9.97e-07 | 6 |
surface ectodermal cell | 9.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 4.69e-13 | 3 |
surface structure | 2.57e-11 | 99 |
oral opening | 1.73e-10 | 22 |
mammary gland | 3.43e-10 | 4 |
mammary bud | 3.43e-10 | 4 |
mammary ridge | 3.43e-10 | 4 |
mammary placode | 3.43e-10 | 4 |
skin epidermis | 2.94e-09 | 15 |
outer epithelium | 2.94e-09 | 15 |
enveloping layer of ectoderm | 2.94e-09 | 15 |
skin gland | 8.50e-09 | 2 |
epidermis gland | 8.50e-09 | 2 |
gland of integumental system | 8.50e-09 | 2 |
sebaceous gland | 8.50e-09 | 2 |
skin sebaceous gland | 8.50e-09 | 2 |
sweat gland | 8.50e-09 | 2 |
sweat gland placode | 8.50e-09 | 2 |
sebaceous gland placode | 8.50e-09 | 2 |
mouth | 1.21e-07 | 29 |
stomodeum | 1.21e-07 | 29 |
orifice | 2.02e-07 | 36 |
exocrine gland | 3.88e-07 | 31 |
exocrine system | 3.88e-07 | 31 |
integument | 6.61e-07 | 46 |
integumental system | 6.61e-07 | 46 |