FFCP PHASE1:Hg19::chr1:150483436..150483468,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:150483436..150483468,+ | |||
|coexpression_cluster_id=C766 | |||
|description=CAGE_peak_at_chr1:150483436..150483468,+ | |description=CAGE_peak_at_chr1:150483436..150483468,+ | ||
|id=chr1:150483436..150483468,+ | |id=chr1:150483436..150483468,+ | ||
|ontology_enrichment_celltype=CL:0000057!4.02e-19!75;CL:0000055!7.00e-18!180;CL:0002620!1.94e-11!23 | |ontology_enrichment_celltype=CL:0000057!4.02e-19!75;CL:0000055!7.00e-18!180;CL:0002620!1.94e-11!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;9.55e-15;23!CL:0000134;1.63e-08;55!CL:0000048;1.85e-08;58!CL:0000723;2.22e-08;61!CL:0002334;9.25e-08;12!CL:0002570;1.18e-07;8!CL:0000569;6.14e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.03e-16,76;CL:0002620,4.08e-15,23;CL:0000048,4.73e-08,427;CL:0002320,6.01e-08,361;CL:0002334,8.47e-08,12;CL:0002570,1.09e-07,8;CL:0000723,1.15e-07,433;CL:0000134,1.63e-07,354;CL:0000034,3.55e-07,441;CL:0000219,3.91e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000011;6.14e-07;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;1.24e-08;5!DOID:450;1.24e-08;5!DOID:66;1.24e-08;5!DOID:423;1.24e-08;5!DOID:0080000;1.24e-08;5!DOID:11722;1.24e-08;5!DOID:2394;8.68e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:17,8.92e-09,5;DOID:450,8.92e-09,5;DOID:66,8.92e-09,5;DOID:423,8.92e-09,5;DOID:0080000,8.92e-09,5;DOID:11722,8.92e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!9.78e-14!95;UBERON:0002199!2.15e-13!45;UBERON:0002416!2.15e-13!45;UBERON:0002097!5.28e-12!40 | |ontology_enrichment_uberon=UBERON:0003102!9.78e-14!95;UBERON:0002199!2.15e-13!45;UBERON:0002416!2.15e-13!45;UBERON:0002097!5.28e-12!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;3.70e-11;41!UBERON:0002199;1.56e-09;46!UBERON:0002416;1.56e-09;46!UBERON:0003102;6.33e-09;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,4.44e-15,46;UBERON:0002416,4.44e-15,46;UBERON:0002097,2.68e-14,41;UBERON:0003102,2.35e-13,99;UBERON:0002384,3.45e-08,371 | |||
|phase1_expression=0.363356758541113,1.07050261945492,0.281908808191942,1.0007329835313,0.893922188854576,0.872338524100369,0,0.631719873426831,0.522371256399677,0,0,0.218441372130172,0.527533956456907,0.123766352960047,0.662794751455832,1.34465029290355,1.80808358407193,0,0,0.123121058076788,1.63200552995402,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,1.83884244895785,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15877215168659,1.5905718941022,0.486634870302636,0.189069634328136,0.221729397462564,0.175669571386252,0.0654895377488563,1.82147644146271,0.370784442784429,1.29818957461873,0.348259474598534,1.86141144726411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,1.98788780678127,0.379891534993739,0.926864265692532,6.02356903572509,1.06400514659507,0.560677600142307,0,0.74000264525148,0,0,0.817309515567294,0.302714855289863,0,0.234321431833797,0.312160076830321,0,1.49448680551801,0.822041490506354,0.323745888736263,1.12360645361799,0.408308342509787,0.61417158655884,1.34323515528495,0,3.21447008062124,0,0.718618141816238,0.336672227908132,0.875829639103749,0,1.31693286264251,3.0648779579902,1.20190447125277,0.226864366320042,3.7671823494661,1.2813443329114,1.48352330811693,3.00091096084402,1.75189299705346,3.09168648054755,1.48893485065272,1.35021065793013,1.94874010322397,1.7670364197088,1.28869858099219,3.23292113637624,2.84007674013291,1.61203357164224,0.67824236924195,0.386521706326594,0,0,0,0,0,0.10366105501537,0,0,3.12899064659632,9.00537313470039,1.38134921352481,0.464367928031979,1.44375896333917,0.354920400119532,0.168584690078102,0.241011029883482,0.220587945464788,0,0.237270619111097,0.134831308160164,0,0,0,0,0.4115740113314,2.94017422771084,0,0.982827216677626,0,0,0,0,0.219500570817251,0,0.301586917234893,0.0925884451585296,0,0,0,0,0.117408694235822,0.288732895522148,0,0.190254152234598,0,0,0.246217006087397,0.234004265139238,1.63494278517601,0,0.335964256397719,0.708875486211932,0,0,0,0,0.176096868026452,0,0.144119953416961,0.50496973370552,0.825472625798197,0.381988425558278,2.34434894420094,3.4214489204541,0.822619941626588,2.70308752059526,0.857479297891735,0,0.87192013766656,0.22001485746285,0.129271715757778,3.57656445851882,0,0.797814349754612,2.08014873822732,0,0,0,0,1.08524321078289,0.823240336780769,0.325736184293735,0,0,0.301439377059586,0,0.199945982364114,2.43247561282381,0.502257091432126,4.21667878966063,0,0,2.85273810081437,0.723906533337896,0.821905290201534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,11.5978842718155,2.20783381047509,0.234282829985426,0.300946099727719,0,0,0,0.368738337083406,2.08520674723399,1.56640925970192,2.05886054286514,0,0,0,0,1.66435439510497,0.30239029332968,0.248107807818777,0.460385919864187,1.96462066103151,1.66580894032411,0,1.12597744800525,1.48418066444991,2.31314540703983,3.55123450626254,0.492762936082855,2.07701771673448,1.16210378459959,0,0,0.920809889358963,0.34444334449382,2.36718518408732,4.06485686374215,0,0.231046011313244,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0.574265537996172,0,0,0.290012154876366,0,0,0.275673144969061,0.214840489736547,0.145016693914229,0.170453254832202,0,0,0.192190067365106,0,0.10115778085555,1.39453664789186,10.7036197922418,0,1.23213432070436,0,0.869932992075073,0,0,0,0,0.953150969619124,0.255897791311334,0,0.636406495851874,0,0.719489830333259,1.09814811894422,0.589062011728432,0,0,1.26377536871694,0,2.43713489631284,0,0.545999645631943,0.707027159768564,3.39024349860728,0,0,0.876901770507525,0,1.31178950409327,0,0.6196469961995,0.281695602532241,0,0.0982490410131212,0,1.41904425628239,2.11107635297664,1.64647446479951,0,0,0.0962221127255121,0,1.08890984861323,0.659006605437454,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0.79312517629427,1.1750647824022,0,0,0,0,0.0711418433484141,0,0,0,0.423347165447766,0,0.280797178113459,0.228234679033192,0,0,0,0,0,0,0,0.307240764308458,0,0.333698283423817,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0.296964680832639,0.614321404198464,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,2.79935628895627,0,0,0,0.0986434056369336,2.3948309234694,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0.113942055847001,0,0.0897576444097721,0,0,0.366390373607449,0,0,0.627921025580099,0,0.225595660617181,0.392125068635479,0.335643173951685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0.313932918407225,0,0,0.416024019039416,0,0.489961987071888,0,7.86270007089136,0.343972064943233,0,0.0730893170861856,0.0821154570532092,10.5718027972377,0.0882561266915003,0,0,0,0,0,0.160317640503067,1.70762395791482,0,0,0,0,0,0.124252535565433,0,0.407712618220842,0.313808538937,0.203996435272644,0,0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|short_description=p@chr1:150483436..150483468,+ | |short_description=p@chr1:150483436..150483468,+ | ||
}} | }} |
Latest revision as of 21:09, 27 July 2015
Short description: | p@chr1:150483436..150483468, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:150483436..150483468, + |
Coexpression cluster: | C766_Smooth_esophagus_throat_epididymis_Fibroblast_tonsil_Melanocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.03e-16 | 76 |
skin fibroblast | 4.08e-15 | 23 |
multi fate stem cell | 4.73e-08 | 427 |
connective tissue cell | 6.01e-08 | 361 |
preadipocyte | 8.47e-08 | 12 |
mesenchymal stem cell of adipose | 1.09e-07 | 8 |
somatic stem cell | 1.15e-07 | 433 |
mesenchymal cell | 1.63e-07 | 354 |
stem cell | 3.55e-07 | 441 |
motile cell | 3.91e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
integument | 4.44e-15 | 46 |
integumental system | 4.44e-15 | 46 |
skin of body | 2.68e-14 | 41 |
surface structure | 2.35e-13 | 99 |
connective tissue | 3.45e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.92e-09 | 5 |
myotonic disease | 8.92e-09 | 5 |
muscle tissue disease | 8.92e-09 | 5 |
myopathy | 8.92e-09 | 5 |
muscular disease | 8.92e-09 | 5 |
myotonic dystrophy | 8.92e-09 | 5 |