FFCP PHASE1:Hg19::chr1:149157851..149157876,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:149157851..149157876,- | |||
|coexpression_cluster_id=C302 | |||
|description=CAGE_peak_at_chr1:149157851..149157876,- | |description=CAGE_peak_at_chr1:149157851..149157876,- | ||
|id=chr1:149157851..149157876,- | |id=chr1:149157851..149157876,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002127;3.75e-18;1!CL:0000911;3.75e-18;1!CL:0000814;3.75e-18;1!CL:0002178;9.37e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,3.75e-18,1;CL:0000914,3.75e-18,1;CL:0000911,3.75e-18,1;CL:0000814,3.75e-18,1;CL:0002042,3.75e-18,1;CL:0002039,3.75e-18,1;CL:0002040,3.75e-18,1;CL:0002041,3.75e-18,1;CL:0000893,9.46e-10,2;CL:0002489,9.46e-10,2;CL:0000809,9.46e-10,2;CL:0000808,9.46e-10,2;CL:0000894,9.46e-10,2;CL:0000806,9.46e-10,2;CL:0000807,9.46e-10,2;CL:0000805,9.46e-10,2;CL:0002425,9.46e-10,2;CL:0002178,9.12e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002425;9.46e-10;2 | |||
|ontology_enrichment_disease=DOID:2531!2.54e-24!51;DOID:0060083!2.54e-24!51;DOID:1240!2.70e-16!39;DOID:0050686!1.28e-15!137;DOID:162!7.17e-14!235;DOID:14566!2.23e-13!239;DOID:8692!3.07e-13!31;DOID:74!1.36e-07!2 | |ontology_enrichment_disease=DOID:2531!2.54e-24!51;DOID:0060083!2.54e-24!51;DOID:1240!2.70e-16!39;DOID:0050686!1.28e-15!137;DOID:162!7.17e-14!235;DOID:14566!2.23e-13!239;DOID:8692!3.07e-13!31;DOID:74!1.36e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:3347;5.72e-18;1!DOID:225;1.12e-17;1!DOID:1240;1.69e-14;39!DOID:2531;1.88e-14;51!DOID:0060083;1.88e-14;51!DOID:74;1.64e-09;2!DOID:3493;1.64e-09;2!DOID:8692;8.50e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,6.23e-18,1;DOID:225,7.37e-18,1;DOID:2531,1.30e-15,51;DOID:0060083,1.30e-15,51;DOID:1240,3.52e-15,39;DOID:74,1.33e-09,2;DOID:3493,1.57e-09,2;DOID:0050686,4.80e-09,137;DOID:8692,7.33e-09,31;DOID:162,1.37e-07,235;DOID:14566,2.07e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000945!6.43e-10!8;UBERON:0010039!6.43e-10!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;1.12e-17;1!UBERON:0009842;1.12e-17;1!UBERON:0003704;1.12e-17;1!UBERON:0001171;1.12e-17;1!UBERON:0001172;1.12e-17;1!UBERON:0001280;9.37e-07;3!UBERON:0004647;9.37e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.70e-17,1;UBERON:0009842,1.70e-17,1;UBERON:0003704,1.70e-17,1;UBERON:0001171,1.70e-17,1;UBERON:0001172,1.70e-17,1 | |||
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| ||
|short_description=p@chr1:149157851..149157876,- | |short_description=p@chr1:149157851..149157876,- | ||
}} | }} |
Latest revision as of 20:58, 27 July 2015
Short description: | p@chr1:149157851..149157876, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:149157851..149157876, - |
Coexpression cluster: | C302_acute_peripheral_Neutrophils_NK_myelodysplastic_CD34_carcinoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 3.75e-18 | 1 |
immature NK T cell | 3.75e-18 | 1 |
effector T cell | 3.75e-18 | 1 |
mature NK T cell | 3.75e-18 | 1 |
immature NK T cell stage IV | 3.75e-18 | 1 |
immature NK T cell stage I | 3.75e-18 | 1 |
immature NK T cell stage II | 3.75e-18 | 1 |
immature NK T cell stage III | 3.75e-18 | 1 |
thymocyte | 9.46e-10 | 2 |
double negative thymocyte | 9.46e-10 | 2 |
double-positive, alpha-beta thymocyte | 9.46e-10 | 2 |
DN4 thymocyte | 9.46e-10 | 2 |
DN1 thymic pro-T cell | 9.46e-10 | 2 |
DN2 thymocyte | 9.46e-10 | 2 |
DN3 thymocyte | 9.46e-10 | 2 |
immature single positive thymocyte | 9.46e-10 | 2 |
early T lineage precursor | 9.46e-10 | 2 |
epithelial cell of stomach | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 1.70e-17 | 1 |
acinus | 1.70e-17 | 1 |
intrahepatic bile duct | 1.70e-17 | 1 |
portal lobule | 1.70e-17 | 1 |
hepatic acinus | 1.70e-17 | 1 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 6.23e-18 | 1 |
syndrome | 7.37e-18 | 1 |
hematologic cancer | 1.30e-15 | 51 |
immune system cancer | 1.30e-15 | 51 |
leukemia | 3.52e-15 | 39 |
hematopoietic system disease | 1.33e-09 | 2 |
signet ring cell adenocarcinoma | 1.57e-09 | 2 |
organ system cancer | 4.80e-09 | 137 |
myeloid leukemia | 7.33e-09 | 31 |
cancer | 1.37e-07 | 235 |
disease of cellular proliferation | 2.07e-07 | 239 |