FFCP PHASE1:Hg19::chr1:12416343..12416350,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:12416343..12416350,+ | |||
|coexpression_cluster_id=C927 | |||
|description=CAGE_peak_at_chr1:12416343..12416350,+ | |description=CAGE_peak_at_chr1:12416343..12416350,+ | ||
|id=chr1:12416343..12416350,+ | |id=chr1:12416343..12416350,+ | ||
|ontology_enrichment_celltype=CL:0000064!4.20e-17!3;CL:0005012!4.20e-17!3;CL:0000067!4.20e-17!3;CL:0002304!4.20e-17!3;CL:0000153!4.20e-10!9;CL:0000447!4.20e-10!9;CL:0000667!5.79e-09!6;CL:0000058!5.79e-09!6;CL:0000138!5.79e-09!6;CL:0002622!6.05e-08!3;CL:0000342!6.80e-07!1;CL:0002565!6.80e-07!1 | |ontology_enrichment_celltype=CL:0000064!4.20e-17!3;CL:0005012!4.20e-17!3;CL:0000067!4.20e-17!3;CL:0002304!4.20e-17!3;CL:0000153!4.20e-10!9;CL:0000447!4.20e-10!9;CL:0000667!5.79e-09!6;CL:0000058!5.79e-09!6;CL:0000138!5.79e-09!6;CL:0002622!6.05e-08!3;CL:0000342!6.80e-07!1;CL:0002565!6.80e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000064;4.68e-66;3!CL:0000067;4.68e-66;3!CL:0005012;4.68e-66;3!CL:0002304;4.68e-66;3!CL:0000075;2.21e-17;27!CL:0000306;8.81e-14;4!CL:0002222;8.81e-14;4!CL:0002224;8.81e-14;4!CL:0000710;6.00e-11;20!CL:0000138;1.44e-09;6!CL:0002077;3.69e-07;34!CL:0000153;8.37e-07;9!CL:0000447;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,6.53e-66,3;CL:0000067,6.53e-66,3;CL:0005012,6.53e-66,3;CL:0002304,6.53e-66,3;CL:0000075,2.34e-17,27;CL:0000306,8.82e-14,4;CL:0002222,8.82e-14,4;CL:0002224,8.82e-14,4;CL:0000710,6.30e-11,20;CL:0000058,1.32e-09,6;CL:0000138,1.32e-09,6;CL:0002077,7.59e-07,34;CL:0000153,7.91e-07,9;CL:0000447,7.91e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000488!2.81e-22!4;UBERON:0007625!1.03e-17!11;UBERON:0001778!4.20e-17!3;UBERON:0001775!4.20e-17!3;UBERON:0000970!1.88e-16!20;UBERON:0002104!1.31e-15!21;UBERON:0002203!6.60e-15!6;UBERON:0001768!6.60e-15!6;UBERON:0000020!3.84e-14!23;UBERON:0001032!1.68e-13!24;UBERON:0004456!1.68e-13!24;UBERON:0000019!2.47e-13!19;UBERON:0000047!2.47e-13!19;UBERON:0004088!2.47e-13!19;UBERON:0003072!2.47e-13!19;UBERON:0003071!2.47e-13!19;UBERON:0004128!2.47e-13!19;UBERON:0001456!5.65e-12!21;UBERON:0001801!1.00e-09!14;UBERON:0005085!2.07e-08!29;UBERON:0002200!3.61e-08!11;UBERON:0006876!3.61e-08!11;UBERON:0002506!6.80e-07!1;UBERON:0001769!6.80e-07!1;UBERON:0003056!7.16e-07!61;UBERON:0002363!8.03e-07!1;UBERON:0007647!8.03e-07!1;UBERON:0010115!8.03e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;4.68e-66;3!UBERON:0001775;4.68e-66;3!UBERON:0000488;6.60e-50;4!UBERON:0007625;4.67e-41;11!UBERON:0002203;9.87e-34;6!UBERON:0001768;9.87e-34;6!UBERON:0002200;9.87e-34;6!UBERON:0001801;1.63e-32;14!UBERON:0000019;2.96e-24;19!UBERON:0000047;2.96e-24;19!UBERON:0004088;2.96e-24;19!UBERON:0010230;2.96e-24;19!UBERON:0000970;4.25e-23;20!UBERON:0002104;4.76e-22;21!UBERON:0001456;4.76e-22;21!UBERON:0000020;3.18e-20;23!UBERON:0001032;2.00e-19;24!UBERON:0004456;2.00e-19;24!UBERON:0006876;5.63e-19;11!UBERON:0010371;6.15e-15;31!UBERON:0010077;8.81e-14;4!UBERON:0005389;8.81e-14;4!UBERON:0000484;8.81e-14;4!UBERON:0000965;8.81e-14;4!UBERON:0001803;8.81e-14;4!UBERON:0001444;2.44e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,6.53e-66,3;UBERON:0001775,6.53e-66,3;UBERON:0000488,8.47e-50,4;UBERON:0007625,5.35e-41,11;UBERON:0002203,1.17e-33,6;UBERON:0001768,1.17e-33,6;UBERON:0002200,1.17e-33,6;UBERON:0001801,1.81e-32,14;UBERON:0000019,4.59e-23,20;UBERON:0000047,4.59e-23,20;UBERON:0010312,4.59e-23,20;UBERON:0004088,4.59e-23,20;UBERON:0010230,4.59e-23,20;UBERON:0003072,4.59e-23,20;UBERON:0004128,4.59e-23,20;UBERON:0003071,4.59e-23,20;UBERON:0000970,5.11e-22,21;UBERON:0002104,5.11e-22,21;UBERON:0001456,4.58e-21,22;UBERON:0000020,2.13e-19,24;UBERON:0001032,2.13e-19,24;UBERON:0004456,2.13e-19,24;UBERON:0006876,6.17e-19,11;UBERON:0005085,3.01e-15,31;UBERON:0010077,8.82e-14,4;UBERON:0005389,8.82e-14,4;UBERON:0000484,8.82e-14,4;UBERON:0002546,8.82e-14,4;UBERON:0000965,8.82e-14,4;UBERON:0001803,8.82e-14,4;UBERON:0003073,8.82e-14,4;UBERON:0005426,8.82e-14,4;UBERON:0001444,5.47e-10,49;UBERON:0000033,7.55e-09,56;UBERON:0000153,4.50e-08,62;UBERON:0007811,4.50e-08,62;UBERON:0003056,4.50e-08,61;UBERON:0000076,1.49e-07,8 | |||
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|short_description=p@chr1:12416343..12416350,+ | |short_description=p@chr1:12416343..12416350,+ | ||
}} | }} |
Latest revision as of 20:27, 27 July 2015
Short description: | p@chr1:12416343..12416350, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:12416343..12416350, + |
Coexpression cluster: | C927_Lens_gall_Ciliary_mesodermal_Fibroblast_Meningeal_cholangiocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 6.53e-66 | 3 |
ciliated epithelial cell | 6.53e-66 | 3 |
multi-ciliated epithelial cell | 6.53e-66 | 3 |
non-pigmented ciliary epithelial cell | 6.53e-66 | 3 |
columnar/cuboidal epithelial cell | 2.34e-17 | 27 |
crystallin accumulating cell | 8.82e-14 | 4 |
vertebrate lens cell | 8.82e-14 | 4 |
lens epithelial cell | 8.82e-14 | 4 |
neurecto-epithelial cell | 6.30e-11 | 20 |
chondroblast | 1.32e-09 | 6 |
chondrocyte | 1.32e-09 | 6 |
ecto-epithelial cell | 7.59e-07 | 34 |
GAG secreting cell | 7.91e-07 | 9 |
carbohydrate secreting cell | 7.91e-07 | 9 |