FFCP PHASE1:Hg19::chr1:116048147..116048169,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:116048147..116048169,+ | |||
|coexpression_cluster_id=C1109 | |||
|description=CAGE_peak_at_chr1:116048147..116048169,+ | |description=CAGE_peak_at_chr1:116048147..116048169,+ | ||
|id=chr1:116048147..116048169,+ | |id=chr1:116048147..116048169,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.30e-19!43;CL:0002620!6.29e-18!23;CL:0002368!6.67e-14!13;CL:0000622!9.44e-13!5;CL:0000223!1.03e-12!59;CL:0000244!2.33e-11!4;CL:0000731!2.33e-11!4;CL:0002159!2.83e-11!13;CL:0000154!1.52e-10!6;CL:0002202!9.94e-10!9;CL:0002632!9.94e-10!9;CL:0002166!7.72e-09!3;CL:0000068!2.25e-08!3;CL:0000069!2.25e-08!3;CL:0000307!2.25e-08!3;CL:0000377!2.25e-08!3;CL:0002328!2.42e-08!3;CL:0002621!3.33e-08!3;CL:0002077!3.56e-08!33;CL:0002623!4.78e-08!3;CL:0000066!5.68e-07!254;CL:0000150!7.25e-07!9 | |ontology_enrichment_celltype=CL:0002076!1.30e-19!43;CL:0002620!6.29e-18!23;CL:0002368!6.67e-14!13;CL:0000622!9.44e-13!5;CL:0000223!1.03e-12!59;CL:0000244!2.33e-11!4;CL:0000731!2.33e-11!4;CL:0002159!2.83e-11!13;CL:0000154!1.52e-10!6;CL:0002202!9.94e-10!9;CL:0002632!9.94e-10!9;CL:0002166!7.72e-09!3;CL:0000068!2.25e-08!3;CL:0000069!2.25e-08!3;CL:0000307!2.25e-08!3;CL:0000377!2.25e-08!3;CL:0002328!2.42e-08!3;CL:0002621!3.33e-08!3;CL:0002077!3.56e-08!33;CL:0002623!4.78e-08!3;CL:0000066!5.68e-07!254;CL:0000150!7.25e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000244;6.90e-28;4!CL:0000731;6.90e-28;4!CL:0002166;5.42e-21;3!CL:0000317;1.68e-14;2!CL:1000448;1.68e-14;2!CL:0002308;1.68e-14;2!CL:0002140;1.68e-14;2!CL:0002076;3.42e-14;42!CL:0000622;9.01e-13;5!CL:0002368;9.24e-13;13!CL:0002202;4.12e-12;9!CL:0002632;4.12e-12;9!CL:0002159;6.02e-12;14!CL:0000154;9.96e-11;6!CL:0000307;3.49e-10;3!CL:0002620;5.28e-10;23!CL:0002621;5.73e-10;3!CL:0002328;1.33e-09;3!CL:0002252;3.83e-08;1!CL:0002077;7.29e-08;34!CL:0000150;2.64e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,5.63e-28,4;CL:0000731,5.63e-28,4;CL:0002166,3.61e-21,3;CL:0002076,2.76e-17,42;CL:0000317,1.57e-14,2;CL:1000448,1.57e-14,2;CL:0002308,1.57e-14,2;CL:0002140,1.57e-14,2;CL:0002368,9.02e-13,13;CL:0000622,9.39e-13,5;CL:0002202,3.67e-12,9;CL:0002632,3.67e-12,9;CL:0002159,5.12e-12,14;CL:0000223,5.64e-12,58;CL:0000154,1.03e-10,6;CL:0000068,3.65e-10,3;CL:0000069,3.65e-10,3;CL:0000307,3.65e-10,3;CL:0000377,3.65e-10,3;CL:0002620,5.20e-10,23;CL:0002621,5.49e-10,3;CL:0002328,1.07e-09,3;CL:0000066,1.26e-09,253;CL:0002077,8.31e-09,34;CL:0002252,3.58e-08,1;CL:0000150,2.70e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;3.49e-10;3 | |||
|ontology_enrichment_disease=DOID:17!3.27e-12!5;DOID:450!3.27e-12!5;DOID:66!3.27e-12!5;DOID:423!3.27e-12!5;DOID:0080000!3.27e-12!5;DOID:11722!3.27e-12!5 | |ontology_enrichment_disease=DOID:17!3.27e-12!5;DOID:450!3.27e-12!5;DOID:66!3.27e-12!5;DOID:423!3.27e-12!5;DOID:0080000!3.27e-12!5;DOID:11722!3.27e-12!5 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002097!2.47e-17!40;UBERON:0002199!8.03e-15!45;UBERON:0002416!8.03e-15!45;UBERON:0003102!9.37e-15!95;UBERON:0000365!6.10e-13!5;UBERON:0005910!1.06e-10!6;UBERON:0004815!2.42e-08!3;UBERON:0002031!2.42e-08!3;UBERON:0001949!3.33e-08!3;UBERON:0007196!1.04e-07!14;UBERON:0001558!1.04e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;2.31e-22;5!UBERON:0000486;4.43e-20;12!UBERON:0005910;1.13e-18;6!UBERON:0001708;6.81e-16;4!UBERON:0008895;6.81e-16;4!UBERON:0002419;1.68e-14;2!UBERON:0007771;1.68e-14;2!UBERON:0003297;1.68e-14;2!UBERON:0001821;1.68e-14;2!UBERON:0003487;1.68e-14;2!UBERON:0001820;1.68e-14;2!UBERON:0011159;7.99e-13;5!UBERON:0001949;5.73e-10;3!UBERON:0004815;1.33e-09;3!UBERON:0002031;1.33e-09;3!UBERON:0005911;7.67e-09;36!UBERON:0002097;3.97e-08;41!UBERON:0007195;8.12e-08;1!UBERON:0007196;2.58e-07;15!UBERON:0001558;2.58e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.97e-22,5;UBERON:0005910,9.88e-19,6;UBERON:0001708,5.03e-16,4;UBERON:0008895,5.03e-16,4;UBERON:0002419,1.57e-14,2;UBERON:0007771,1.57e-14,2;UBERON:0003297,1.57e-14,2;UBERON:0001821,1.57e-14,2;UBERON:0003487,1.57e-14,2;UBERON:0001820,1.57e-14,2;UBERON:0005089,1.57e-14,2;UBERON:0005088,1.57e-14,2;UBERON:0011159,6.28e-13,5;UBERON:0003102,2.91e-12,99;UBERON:0010188,7.39e-11,6;UBERON:0002539,7.39e-11,6;UBERON:0008816,7.39e-11,6;UBERON:0001949,5.49e-10,3;UBERON:0004815,1.07e-09,3;UBERON:0002031,1.07e-09,3;UBERON:0002097,2.35e-09,41;UBERON:0002199,3.24e-08,46;UBERON:0002416,3.24e-08,46;UBERON:0007195,1.06e-07,1;UBERON:0007196,2.41e-07,15;UBERON:0001558,2.41e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,1.204823675113,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18047026071267,0.496971951695318,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79389635688862,0.640672166455702,0.847727604638247,1.20036438433761,0.206105058476878,0,0.558350568994769,8.60759294430458,3.80004320128675,2.01947019395292,1.47279837827679,0.484938170456436,0.710019185033229,0.503760491138201,0.67824236924195,1.35282597214308,4.36393792945335,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,0,0.100528972411631,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,2.85569617938061,2.1266264586358,0.0895585227028483,1.74380363108377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,1.10391690523754,1.17141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,1.00253235151642,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59412430396938,1.30012049207304,0,0.096670718292122,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,2.04180339991335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.384888450902048,4.02181365321472,2.17781969722645,0,8.6101074534246,1.68471475667626,3.54744122829341,11.256446610141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.478278818186467,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0.76280561296425,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499921631848426,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,2.0486217251274,0.691259661814092,0,0.118332000730565,0.0852134047591577,0,2.2910686854405,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,0,0,0.897054900644907,0.509177266225319,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,1.204823675113,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18047026071267,0.496971951695318,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79389635688862,0.640672166455702,0.847727604638247,1.20036438433761,0.206105058476878,0,0.558350568994769,8.60759294430458,3.80004320128675,2.01947019395292,1.47279837827679,0.484938170456436,0.710019185033229,0.503760491138201,0.67824236924195,1.35282597214308,4.36393792945335,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548751427043128,0,0.100528972411631,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,2.85569617938061,2.1266264586358,0.0895585227028483,1.74380363108377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,1.10391690523754,1.17141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,1.00253235151642,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59412430396938,1.30012049207304,0,0.096670718292122,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,2.04180339991335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.384888450902048,4.02181365321472,2.17781969722645,0,8.6101074534246,1.68471475667626,3.54744122829341,11.256446610141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.478278818186467,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0.76280561296425,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499921631848426,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,2.0486217251274,0.691259661814092,0,0.118332000730565,0.0852134047591577,0,2.2910686854405,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,0,0,0.897054900644907,0.509177266225319,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:116048147..116048169,+ | |short_description=p@chr1:116048147..116048169,+ | ||
}} | }} |
Latest revision as of 20:01, 27 July 2015
Short description: | p@chr1:116048147..116048169, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:116048147..116048169, + |
Coexpression cluster: | C1109_Urothelial_Small_Gingival_Mallassezderived_Prostate_Sebocyte_Bronchial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 5.63e-28 | 4 |
urothelial cell | 5.63e-28 | 4 |
epithelial cell of Malassez | 3.61e-21 | 3 |
endo-epithelial cell | 2.76e-17 | 42 |
sebum secreting cell | 1.57e-14 | 2 |
epithelial cell of sweat gland | 1.57e-14 | 2 |
epithelial cell of skin gland | 1.57e-14 | 2 |
acinar cell of sebaceous gland | 1.57e-14 | 2 |
respiratory epithelial cell | 9.02e-13 | 13 |
acinar cell | 9.39e-13 | 5 |
epithelial cell of tracheobronchial tree | 3.67e-12 | 9 |
epithelial cell of lower respiratory tract | 3.67e-12 | 9 |
general ecto-epithelial cell | 5.12e-12 | 14 |
endodermal cell | 5.64e-12 | 58 |
protein secreting cell | 1.03e-10 | 6 |
duct epithelial cell | 3.65e-10 | 3 |
branched duct epithelial cell | 3.65e-10 | 3 |
tracheal epithelial cell | 3.65e-10 | 3 |
tracheoblast | 3.65e-10 | 3 |
skin fibroblast | 5.20e-10 | 23 |
gingival epithelial cell | 5.49e-10 | 3 |
bronchial epithelial cell | 1.07e-09 | 3 |
epithelial cell | 1.26e-09 | 253 |
ecto-epithelial cell | 8.31e-09 | 34 |
epithelial cell of esophagus | 3.58e-08 | 1 |
glandular epithelial cell | 2.70e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.97e-22 | 5 |
transitional epithelium | 9.88e-19 | 6 |
jaw skeleton | 5.03e-16 | 4 |
splanchnocranium | 5.03e-16 | 4 |
skin gland | 1.57e-14 | 2 |
epidermis gland | 1.57e-14 | 2 |
gland of integumental system | 1.57e-14 | 2 |
sebaceous gland | 1.57e-14 | 2 |
skin sebaceous gland | 1.57e-14 | 2 |
sweat gland | 1.57e-14 | 2 |
sweat gland placode | 1.57e-14 | 2 |
sebaceous gland placode | 1.57e-14 | 2 |
primary subdivision of cranial skeletal system | 6.28e-13 | 5 |
surface structure | 2.91e-12 | 99 |
protuberance | 7.39e-11 | 6 |
pharyngeal arch | 7.39e-11 | 6 |
embryonic head | 7.39e-11 | 6 |
gingival epithelium | 5.49e-10 | 3 |
lower respiratory tract epithelium | 1.07e-09 | 3 |
epithelium of bronchus | 1.07e-09 | 3 |
skin of body | 2.35e-09 | 41 |
integument | 3.24e-08 | 46 |
integumental system | 3.24e-08 | 46 |
stroma of bone marrow | 1.06e-07 | 1 |
tracheobronchial tree | 2.41e-07 | 15 |
lower respiratory tract | 2.41e-07 | 15 |