FFCP PHASE1:Hg19::chr1:114523008..114523020,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:114523008..114523020,+ | |||
|coexpression_cluster_id=C323 | |coexpression_cluster_id=C323 | ||
|description=CAGE_peak_at_chr1:114523008..114523020,+ | |description=CAGE_peak_at_chr1:114523008..114523020,+ | ||
|id=chr1:114523008..114523020,+ | |id=chr1:114523008..114523020,+ | ||
|ontology_enrichment_celltype=CL:0000057!1.03e-11!75;CL:0000055!3.63e-11!180;CL:0002334!3.26e-08!12;CL:0002620!4.80e-07!23 | |ontology_enrichment_celltype=CL:0000057!1.03e-11!75;CL:0000055!3.63e-11!180;CL:0002334!3.26e-08!12;CL:0002620!4.80e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002577;8.36e-25;3!CL:0002570;9.57e-24;8!CL:0002536;3.42e-17;2!CL:0002617;4.07e-16;2!CL:0000349;1.17e-14;19!CL:0000723;5.74e-09;61!CL:0000048;7.60e-08;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,9.45e-25,3;CL:0002570,5.95e-24,8;CL:0002536,3.30e-17,2;CL:0002617,6.47e-16,2;CL:0000349,1.03e-14,19;CL:0000136,1.53e-12,15 | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.46e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002199!2.49e-07!45;UBERON:0002416!2.49e-07!45;UBERON:0001987!6.28e-07!4;UBERON:0004340!6.28e-07!4;UBERON:0000478!6.66e-07!24 | |ontology_enrichment_uberon=UBERON:0002199!2.49e-07!45;UBERON:0002416!2.49e-07!45;UBERON:0001987!6.28e-07!4;UBERON:0004340!6.28e-07!4;UBERON:0000478!6.66e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.75e-19;14!UBERON:0001987;9.26e-19;4!UBERON:0003714;1.95e-16;2!UBERON:0000478;1.69e-11;24!UBERON:0000941;6.46e-09;1!UBERON:0001785;6.46e-09;1!UBERON:0002464;6.46e-09;1!UBERON:0004904;6.46e-09;1!UBERON:0001021;6.46e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,1.93e-19,14;UBERON:0001987,1.02e-18,4;UBERON:0004340,1.02e-18,4;UBERON:0003714,1.60e-16,2;UBERON:0005631,2.87e-14,14;UBERON:0000158,2.87e-14,14;UBERON:0000478,1.52e-11,24;UBERON:0003124,6.28e-11,7;UBERON:0000941,4.91e-09,1;UBERON:0001785,4.91e-09,1;UBERON:0002464,4.91e-09,1;UBERON:0004904,4.91e-09,1;UBERON:0001021,4.91e-09,1;UBERON:0003902,4.91e-09,1;UBERON:0005425,4.91e-09,1 | |||
|phase1_expression=1.09007027562334,1.07050261945492,0.563817616383885,0,0.893922188854576,0,2.53299878168311,0,0.522371256399677,0,0,8.51921351307672,5.01157258634062,0,0,0,0,0,0.487932798790507,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0.560677600142307,0,0,0,0,0,0.454072282934794,0,0,0,0.570471821544449,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0.250237039743928,0,0.438977620880838,0.612975591598039,0,0,0.179389635688862,0.213557388818567,0.423863802319124,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,0,0.487185025805993,0,0.644349290496095,0.161646056818812,0.710019185033229,0.302256294682921,0,0,0,0,0,0,0,0,0,0,3.12899064659632,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0.1466765716419,0.258543431515556,3.57656445851882,0,0.26593811658487,0,0,0,0,0.285955987316295,1.62786481617433,0.823240336780769,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0.579125226670317,0.205476322550383,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0.178428988797162,0,0,0.300946099727719,0,1.03473071292505,0,0,0.0868836144680828,0.195801157462741,1.37257369524342,0,0,0,3.03127571446259,8.32177197552485,6.35019615992329,0.744323423456331,0.61384789315225,0.841980283299221,0.128139149255701,0.511707249066704,0.321707842287215,0,0.154209693802656,0.710246901252508,0.246381468041427,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386682873168488,0.154048617114644,0,0.413509717453592,1.07420244868274,0.435050081742686,0,0.712256285173899,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.286822704408103,0.294747123039363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0.295547618953547,0,0,0,0.461701551022782,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0.789168805698781,1.20990716048664,0,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0.577901179803038,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0.979762080328227,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,1.49254802886874,1.40227985908335,0,0,1.0062716070103,0,0,0.453692771289717,0.310874401165561,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,2.40016658797892,1.03018711554838,1.6837474438296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786329709279482,0,1.18812770967818,0,0,2.23457967189298,0.636008701306837,0,0,0.352675943690684,0.3062454773532,0.256916900385838,0,0,0,0,0.0691572524642179,0,1.42769420259154,0,0,0,0,0,0,0.198916222116275,0.376051641746286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.571812353413251,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,0.135982980381829,0.436350690340377,0,0.371995018166751,0,0,0,0.109265571963696,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813792356631477,0.665756774185513,0,0 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|phase1_expression=1.09007027562334,1.07050261945492,0.563817616383885,0,0.893922188854576,0,2.53299878168311,0,0.522371256399677,0,0,8.51921351307672,5.01157258634062,0,0,0,0,0,0.487932798790507,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0.560677600142307,0,0,0,0,0,0.454072282934794,0,0,0,0.570471821544449,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0.250237039743928,0,0.438977620880838,0.612975591598039,0,0,0.179389635688862,0.213557388818567,0.423863802319124,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,0,0.487185025805993,0,0.644349290496095,0.161646056818812,0.710019185033229,0.302256294682921,0,0,0,0,0,0,0,0,0,0,3.12899064659632,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0.1466765716419,0.258543431515556,3.57656445851882,0,0.26593811658487,0,0,0,0,0.285955987316295,1.62786481617433,0.823240336780769,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0.579125226670317,0.205476322550383,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0.178428988797162,0,0,0.300946099727719,0,1.03473071292505,0,0,0.0868836144680828,0.195801157462741,1.37257369524342,0,0,0,3.03127571446259,8.32177197552485,6.35019615992329,0.744323423456331,0.61384789315225,0.841980283299221,0.128139149255701,0.511707249066704,0.321707842287215,0,0.154209693802656,0.710246901252508,0.246381468041427,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386682873168488,0.154048617114644,0,0.413509717453592,1.07420244868274,0.435050081742686,0,0.712256285173899,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.286822704408103,0.294747123039363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0.295547618953547,0,0,0,0.461701551022782,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0.789168805698781,1.20990716048664,0,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0.577901179803038,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0.979762080328227,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,1.49254802886874,1.40227985908335,0,0,1.0062716070103,0,0,0.453692771289717,0.310874401165561,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,2.40016658797892,1.03018711554838,1.6837474438296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786329709279482,0,1.18812770967818,0,0,2.23457967189298,0.636008701306837,0,0,0.352675943690684,0.3062454773532,0.256916900385838,0,0,0,0,0.0691572524642179,0,1.42769420259154,0,0,0,0,0,0,0.198916222116275,0.376051641746286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.571812353413251,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0,0.135982980381829,0.436350690340377,0,0.371995018166751,0,0,0,0.109265571963696,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813792356631477,0.665756774185513,0,0 | ||
|short_description=p@chr1:114523008..114523020,+ | |short_description=p@chr1:114523008..114523020,+ | ||
}} | }} |
Latest revision as of 19:57, 27 July 2015
Short description: | p@chr1:114523008..114523020, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:114523008..114523020, + |
Coexpression cluster: | C323_Placental_Amniotic_neuroblastoma_amniotic_chorionic_hairy_locus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 9.45e-25 | 3 |
mesenchymal stem cell of adipose | 5.95e-24 | 8 |
amniotic epithelial cell | 3.30e-17 | 2 |
adipocyte of breast | 6.47e-16 | 2 |
extraembryonic cell | 1.03e-14 | 19 |
fat cell | 1.53e-12 | 15 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 1.93e-19 | 14 |
placenta | 1.02e-18 | 4 |
allantois | 1.02e-18 | 4 |
neural tissue | 1.60e-16 | 2 |
extraembryonic membrane | 2.87e-14 | 14 |
membranous layer | 2.87e-14 | 14 |
extraembryonic structure | 1.52e-11 | 24 |
chorion | 6.28e-11 | 7 |
cranial nerve II | 4.91e-09 | 1 |
cranial nerve | 4.91e-09 | 1 |
nerve trunk | 4.91e-09 | 1 |
nerve connecting eye with brain | 4.91e-09 | 1 |
nerve | 4.91e-09 | 1 |
retinal neural layer | 4.91e-09 | 1 |
presumptive neural retina | 4.91e-09 | 1 |