FFCP PHASE1:Hg19::chr1:10683041..10683058,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:10683041..10683058,+ | |||
|coexpression_cluster_id=C788 | |||
|description=CAGE_peak_at_chr1:10683041..10683058,+ | |description=CAGE_peak_at_chr1:10683041..10683058,+ | ||
|id=chr1:10683041..10683058,+ | |id=chr1:10683041..10683058,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.16e-26;1!UBERON:0005754;5.23e-26;1!UBERON:0009143;9.79e-26;1!UBERON:0007297;1.00e-13;2!UBERON:0009847;1.35e-09;3!UBERON:0003353;1.35e-09;3!UBERON:0006603;2.03e-08;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!5.80e-16!3;UBERON:0004054!5.80e-16!3;UBERON:0000998!9.92e-13!1;UBERON:0006868!9.92e-13!1;UBERON:0000996!1.25e-12!1;UBERON:0001000!1.75e-12!1;UBERON:0005352!1.75e-12!1;UBERON:0001154!2.46e-12!1;UBERON:0001153!2.46e-12!1;UBERON:0005904!3.27e-12!4;UBERON:0007023!3.39e-12!115;UBERON:0001282!3.45e-12!1;UBERON:0009842!3.45e-12!1;UBERON:0003704!3.45e-12!1;UBERON:0001171!3.45e-12!1;UBERON:0001172!3.45e-12!1;UBERON:0001155!1.36e-11!9;UBERON:0001046!1.04e-09!19;UBERON:0000059!1.38e-09!11;UBERON:0000162!7.49e-08!14;UBERON:0001353!7.49e-08!14;UBERON:0000163!7.49e-08!14;UBERON:0006866!7.49e-08!14;UBERON:0000164!7.49e-08!14;UBERON:0000931!7.49e-08!14;UBERON:0004175!2.17e-07!25;UBERON:0004122!2.33e-07!15;UBERON:0001255!5.11e-07!2;UBERON:0001556!5.11e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;5.23e-26;1!UBERON:0006868;5.23e-26;1!UBERON:0000996;9.79e-26;1!UBERON:0001255;8.28e-14;2!UBERON:0001556;8.28e-14;2!UBERON:0006947;1.35e-09;3!UBERON:0004054;1.35e-09;3!UBERON:0001043;1.67e-09;3!UBERON:0003937;3.01e-09;12!UBERON:0005399;3.01e-09;12!UBERON:0000077;6.14e-09;27!UBERON:0005904;1.64e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,4.61e-26,1;UBERON:0006868,4.61e-26,1;UBERON:0000996,7.62e-26,1;UBERON:0000162,1.33e-16,14;UBERON:0001353,1.33e-16,14;UBERON:0000163,1.33e-16,14;UBERON:0006866,1.33e-16,14;UBERON:0000164,1.33e-16,14;UBERON:0000931,1.33e-16,14;UBERON:0004122,1.52e-15,15;UBERON:0003064,1.32e-14,28;UBERON:0001255,8.28e-14,2;UBERON:0001556,8.28e-14,2;UBERON:0001046,1.99e-12,19;UBERON:0006947,1.30e-09,3;UBERON:0004054,1.30e-09,3;UBERON:0001043,1.81e-09,3;UBERON:0009143,1.81e-09,3;UBERON:0003937,3.01e-09,12;UBERON:0005399,3.01e-09,12;UBERON:0001008,1.06e-08,48;UBERON:0000077,2.27e-08,29;UBERON:0007023,6.57e-08,114;UBERON:0005904,1.59e-07,4;UBERON:0000161,7.37e-07,36 | |||
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|short_description=p@chr1:10683041..10683058,+ | |short_description=p@chr1:10683041..10683058,+ | ||
}} | }} |
Latest revision as of 19:08, 27 July 2015
Short description: | p@chr1:10683041..10683058, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:10683041..10683058, + |
Coexpression cluster: | C788_umbilical_aorta_smooth_bladder_penis_colon_heart |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 4.61e-26 | 1 |
seminal fluid secreting gland | 4.61e-26 | 1 |
vagina | 7.62e-26 | 1 |
cloaca | 1.33e-16 | 14 |
anal region | 1.33e-16 | 14 |
embryonic cloaca | 1.33e-16 | 14 |
terminal part of digestive tract | 1.33e-16 | 14 |
primitive urogenital sinus | 1.33e-16 | 14 |
proctodeum | 1.33e-16 | 14 |
genitourinary system | 1.52e-15 | 15 |
intermediate mesoderm | 1.32e-14 | 28 |
urinary bladder | 8.28e-14 | 2 |
lower urinary tract | 8.28e-14 | 2 |
hindgut | 1.99e-12 | 19 |
male genital duct | 1.30e-09 | 3 |
internal male genitalia | 1.30e-09 | 3 |
esophagus | 1.81e-09 | 3 |
esophageal region | 1.81e-09 | 3 |
sex gland | 3.01e-09 | 12 |
male reproductive gland | 3.01e-09 | 12 |
renal system | 1.06e-08 | 48 |
mixed endoderm/mesoderm-derived structure | 2.27e-08 | 29 |
adult organism | 6.57e-08 | 114 |
duct of male reproductive system | 1.59e-07 | 4 |
orifice | 7.37e-07 | 36 |