FFCP PHASE1:Hg19::chr1:102830819..102830832,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:102830819..102830832,- | |||
|coexpression_cluster_id=C729 | |||
|description=CAGE_peak_at_chr1:102830819..102830832,- | |description=CAGE_peak_at_chr1:102830819..102830832,- | ||
|id=chr1:102830819..102830832,- | |id=chr1:102830819..102830832,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;1.23e-66;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.59e-38!57;UBERON:0005068!8.59e-38!57;UBERON:0006241!8.59e-38!57;UBERON:0007135!8.59e-38!57;UBERON:0002616!2.56e-31!59;UBERON:0000955!1.50e-30!69;UBERON:0006238!1.50e-30!69;UBERON:0001017!1.58e-29!82;UBERON:0005743!4.19e-28!86;UBERON:0002780!1.53e-26!41;UBERON:0001890!1.53e-26!41;UBERON:0006240!1.53e-26!41;UBERON:0003080!6.76e-26!42;UBERON:0001893!7.45e-26!34;UBERON:0000073!2.49e-25!94;UBERON:0001016!2.49e-25!94;UBERON:0003075!1.23e-24!86;UBERON:0007284!1.23e-24!86;UBERON:0007023!4.07e-24!115;UBERON:0002346!1.78e-23!90;UBERON:0001869!1.18e-21!32;UBERON:0002791!5.08e-21!33;UBERON:0002020!2.43e-20!34;UBERON:0003528!2.43e-20!34;UBERON:0001950!1.70e-19!20;UBERON:0000033!3.29e-19!123;UBERON:0000153!3.04e-18!129;UBERON:0007811!3.04e-18!129;UBERON:0002619!8.89e-18!22;UBERON:0003056!1.34e-17!61;UBERON:0000988!7.30e-17!3;UBERON:0000956!1.08e-15!25;UBERON:0000203!1.08e-15!25;UBERON:0002298!4.63e-14!8;UBERON:0004121!1.83e-13!169;UBERON:0002336!2.32e-13!1;UBERON:0001018!2.32e-13!1;UBERON:0002473!2.32e-13!1;UBERON:0005340!2.32e-13!1;UBERON:0002316!2.32e-13!1;UBERON:0003544!2.32e-13!1;UBERON:0001020!2.32e-13!1;UBERON:0005970!2.32e-13!1;UBERON:0002437!2.32e-13!1;UBERON:0007190!2.95e-13!1;UBERON:0000924!4.11e-13!173;UBERON:0006601!4.11e-13!173;UBERON:0001882!5.38e-13!1;UBERON:0005403!5.38e-13!1;UBERON:0003076!5.66e-13!15;UBERON:0003057!5.66e-13!15;UBERON:0002902!6.06e-13!1;UBERON:0009899!6.06e-13!1;UBERON:0003112!7.68e-13!1;UBERON:0000032!7.68e-13!1;UBERON:0005253!7.68e-13!1;UBERON:0003128!7.68e-13!1;UBERON:0002241!7.68e-13!1;UBERON:0001703!7.68e-13!1;UBERON:0004761!7.68e-13!1;UBERON:0009617!7.68e-13!1;UBERON:0002022!8.64e-13!1;UBERON:0002581!1.09e-12!1;UBERON:0001872!3.12e-10!5;UBERON:0000025!5.74e-10!194;UBERON:0004733!1.46e-09!12;UBERON:0002028!1.46e-09!12;UBERON:0007277!1.46e-09!12;UBERON:0004732!7.27e-09!13;UBERON:0000200!1.08e-08!6;UBERON:0004111!1.20e-07!241;UBERON:0005162!2.58e-07!2;UBERON:0000122!2.58e-07!2;UBERON:0001870!2.74e-07!2;UBERON:0000477!3.11e-07!286;UBERON:0002148!3.48e-07!2;UBERON:0009662!3.48e-07!2;UBERON:0000475!3.50e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.52e-44;6!UBERON:0000988;3.27e-23;3!UBERON:0001896;4.09e-23;3!UBERON:0005290;4.09e-23;3!UBERON:0004733;5.74e-23;12!UBERON:0002028;5.74e-23;12!UBERON:0004732;2.66e-21;13!UBERON:0001894;8.16e-11;7!UBERON:0000073;2.48e-10;53!UBERON:0002616;2.48e-10;53!UBERON:0002680;1.12e-08;9!UBERON:0001895;1.12e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,1.52e-44,6;UBERON:0000988,3.27e-23,3;UBERON:0001896,4.09e-23,3;UBERON:0005290,4.09e-23,3;UBERON:0010096,4.09e-23,3;UBERON:0004733,5.74e-23,12;UBERON:0002028,5.74e-23,12;UBERON:0007277,5.74e-23,12;UBERON:0004732,2.66e-21,13;UBERON:0003076,1.24e-18,15;UBERON:0003057,1.24e-18,15;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0001894,8.16e-11,7;UBERON:0006222,8.16e-11,7;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0002680,1.12e-08,9;UBERON:0001895,1.12e-08,9;UBERON:0010092,1.12e-08,9;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89 | |||
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|short_description=p@chr1:102830819..102830832,- | |short_description=p@chr1:102830819..102830832,- | ||
}} | }} |
Latest revision as of 19:03, 27 July 2015
Short description: | p@chr1:102830819..102830832, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:102830819..102830832, - |
Coexpression cluster: | C729_diencephalon_corpus_thalamus_occipital_brain_medulla_frontal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brainstem | 1.52e-44 | 6 |
pons | 3.27e-23 | 3 |
medulla oblongata | 4.09e-23 | 3 |
myelencephalon | 4.09e-23 | 3 |
future myelencephalon | 4.09e-23 | 3 |
segmental subdivision of hindbrain | 5.74e-23 | 12 |
hindbrain | 5.74e-23 | 12 |
presumptive hindbrain | 5.74e-23 | 12 |
segmental subdivision of nervous system | 2.66e-21 | 13 |
posterior neural tube | 1.24e-18 | 15 |
chordal neural plate | 1.24e-18 | 15 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
diencephalon | 8.16e-11 | 7 |
future diencephalon | 8.16e-11 | 7 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
regional part of metencephalon | 1.12e-08 | 9 |
metencephalon | 1.12e-08 | 9 |
future metencephalon | 1.12e-08 | 9 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |