FFCP PHASE1:Hg19::chr19:9406118..9406133,-: Difference between revisions
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|id=chr19:9406118..9406133,-
|short_description=p@chr19:9406118..9406133,-
|description=CAGE_peak_at_chr19:9406118..9406133,-
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:9406118..9406133,- | |||
|coexpression_cluster_id=C277 | |||
|description=CAGE_peak_at_chr19:9406118..9406133,- | |||
|id=chr19:9406118..9406133,- | |||
|ontology_enrichment_celltype=CL:0000077!3.79e-11!19;CL:0000322!2.62e-09!3;CL:0002231!1.06e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002097;1.17e-17;2!CL:0000077;2.21e-16;19!CL:0000322;2.07e-12;3!CL:0000174;3.06e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,1.07e-17,2;CL:0000077,2.16e-16,19;CL:0000322,2.07e-12,3;CL:0000174,2.89e-12,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:6193!1.12e-07!1;DOID:2513!2.09e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:6193;3.61e-34;1!DOID:3910;6.48e-18;2!DOID:3350;7.67e-18;2!DOID:3908;5.73e-08;5!DOID:170;9.23e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,3.61e-34,1;DOID:3910,6.48e-18,2;DOID:3350,7.67e-18,2;DOID:3908,5.73e-08,5;DOID:170,8.97e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0004821!2.62e-09!3;UBERON:0003215!2.62e-09!3;UBERON:0002299!2.62e-09!3;UBERON:0006524!2.62e-09!3;UBERON:0008874!2.62e-09!3;UBERON:0002169!2.62e-09!3;UBERON:0004894!2.62e-09!3;UBERON:0002369!5.85e-09!3;UBERON:0001235!5.85e-09!3;UBERON:0006858!5.85e-09!3;UBERON:0005157!5.73e-08!51;UBERON:0005153!5.19e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;6.48e-18;2!UBERON:0002173;6.48e-18;2!UBERON:0002186;6.48e-18;2!UBERON:0004821;2.07e-12;3!UBERON:0007499;2.07e-12;3!UBERON:0003215;2.07e-12;3!UBERON:0010368;2.07e-12;3!UBERON:0009911;2.07e-12;3!UBERON:0002299;2.07e-12;3!UBERON:0006524;2.07e-12;3!UBERON:0008874;2.07e-12;3!UBERON:0002169;2.07e-12;3!UBERON:0004894;2.07e-12;3!UBERON:0002369;3.06e-12;3!UBERON:0001235;3.06e-12;3!UBERON:0006858;3.06e-12;3!UBERON:0002114;3.06e-12;2!UBERON:0009856;1.22e-09;4!UBERON:0002108;7.25e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,6.48e-18,2;UBERON:0002173,6.48e-18,2;UBERON:0002186,6.48e-18,2;UBERON:0004821,2.07e-12,3;UBERON:0003215,2.07e-12,3;UBERON:0010368,2.07e-12,3;UBERON:0009911,2.07e-12,3;UBERON:0002299,2.07e-12,3;UBERON:0006524,2.07e-12,3;UBERON:0008874,2.07e-12,3;UBERON:0002169,2.07e-12,3;UBERON:0004894,2.07e-12,3;UBERON:0002369,2.89e-12,3;UBERON:0001235,2.89e-12,3;UBERON:0006858,2.89e-12,3;UBERON:0002114,3.24e-12,2;UBERON:0002108,7.49e-08,4 | |||
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|short_description=p@chr19:9406118..9406133,- | |||
}} | }} |
Latest revision as of 18:46, 27 July 2015
Short description: | p@chr19:9406118..9406133, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:9406118..9406133, - |
Coexpression cluster: | C277_mesothelioma_epithelioid_thyroid_extraskeletal_alveolar_glioblastoma_adenocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 1.07e-17 | 2 |
mesothelial cell | 2.16e-16 | 19 |
pneumocyte | 2.07e-12 | 3 |
steroid hormone secreting cell | 2.89e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 6.48e-18 | 2 |
alveolar duct | 6.48e-18 | 2 |
bronchiole | 6.48e-18 | 2 |
pulmonary alveolus epithelium | 2.07e-12 | 3 |
alveolus | 2.07e-12 | 3 |
pulmonary lobule | 2.07e-12 | 3 |
lobule | 2.07e-12 | 3 |
alveolus of lung | 2.07e-12 | 3 |
alveolar system | 2.07e-12 | 3 |
pulmonary acinus | 2.07e-12 | 3 |
alveolar sac | 2.07e-12 | 3 |
alveolar wall | 2.07e-12 | 3 |
adrenal gland | 2.89e-12 | 3 |
adrenal cortex | 2.89e-12 | 3 |
adrenal/interrenal gland | 2.89e-12 | 3 |
duodenum | 3.24e-12 | 2 |
small intestine | 7.49e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 3.61e-34 | 1 |
lung adenocarcinoma | 6.48e-18 | 2 |
mesenchymal cell neoplasm | 7.67e-18 | 2 |
non-small cell lung carcinoma | 5.73e-08 | 5 |
endocrine gland cancer | 8.97e-07 | 6 |