FFCP PHASE1:Hg19::chr19:9074760..9074767,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:9074760..9074767,- | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_at_chr19:9074760..9074767,- | |||
|id=chr19:9074760..9074767,- | |||
|ontology_enrichment_celltype=CL:0002150!3.79e-18!3;CL:0000861!3.79e-18!3;CL:0002536!3.39e-13!2;CL:1000415!5.20e-13!2;CL:0002537!3.07e-12!5 | |||
|ontology_enrichment_celltype_v019=CL:0002537;2.54e-27;5!CL:0000047;9.86e-18;2!CL:0000349;2.27e-16;19!CL:0002541;2.74e-12;3!CL:0002149;7.17e-07;6!CL:0002255;7.17e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,2.08e-27,5;CL:0000349,2.27e-16,19;CL:0002541,3.24e-12,3;CL:0002149,7.17e-07,6;CL:0002255,7.17e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.13e-11!106;DOID:0050687!1.15e-08!143;DOID:6193!1.72e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3001;7.17e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,7.17e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000305!2.00e-22!7;UBERON:0005631!2.78e-21!14;UBERON:0000158!2.78e-21!14;UBERON:0004871!1.33e-19!8;UBERON:0003127!3.39e-13!2;UBERON:0000478!4.77e-12!24;UBERON:0002110!5.74e-09!3;UBERON:0006242!5.74e-09!3;UBERON:0002294!3.20e-08!7;UBERON:0001173!3.20e-08!7;UBERON:0004912!3.20e-08!7;UBERON:0004913!3.40e-07!1;UBERON:0003703!3.40e-07!1;UBERON:0001174!3.40e-07!1;UBERON:0004914!3.40e-07!1;UBERON:0000995!4.11e-07!21;UBERON:0005795!8.89e-07!22;UBERON:0003975!8.89e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.78e-30;10!UBERON:0000158;2.78e-30;10!UBERON:0000305;7.47e-20;7!UBERON:0000478;3.94e-13;24!UBERON:0003124;2.74e-12;3!UBERON:0000920;2.74e-12;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.67e-22,14;UBERON:0000158,6.67e-22,14;UBERON:0000305,6.48e-20,7;UBERON:0004871,1.44e-17,8;UBERON:0000478,3.94e-13,24;UBERON:0000920,3.24e-12,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14870036263921,0.890894042497916,1.84296421259539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,1.27600463892768,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,0,0.174118413160805,0,0.343972064943233,0.19351266257817,0.0730893170861856,0.164230914106418,0,0,0.225980740780532,0,0,0,0.586654148204409,0.0801588202515337,0,0,0,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76280561296425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.35303050233695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0.286888821570705,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:9074760..9074767,- | |||
}} |
Latest revision as of 18:45, 27 July 2015
Short description: | p@chr19:9074760..9074767, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:9074760..9074767, - |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.08e-27 | 5 |
extraembryonic cell | 2.27e-16 | 19 |
chorionic membrane mesenchymal stem cell | 3.24e-12 | 3 |
epithelial cell of uterus | 7.17e-07 | 6 |
stromal cell of endometrium | 7.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 6.67e-22 | 14 |
membranous layer | 6.67e-22 | 14 |
amnion | 6.48e-20 | 7 |
somatic layer of lateral plate mesoderm | 1.44e-17 | 8 |
extraembryonic structure | 3.94e-13 | 24 |
egg chorion | 3.24e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 7.17e-07 | 6 |