FFCP PHASE1:Hg19::chr19:9047470..9047482,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:9047470..9047482,- | |||
|coexpression_cluster_id=C68 | |coexpression_cluster_id=C68 | ||
|description=CAGE_peak_at_chr19:9047470..9047482,- | |description=CAGE_peak_at_chr19:9047470..9047482,- | ||
|id=chr19:9047470..9047482,- | |id=chr19:9047470..9047482,- | ||
|ontology_enrichment_celltype=CL:0000039!7.44e-11!7;CL:0000586!7.44e-11!7;CL:0002150!8.18e-11!3;CL:0000861!8.18e-11!3;CL:0002541!9.04e-11!3;CL:0002536!1.32e-07!2;CL:0002537!4.38e-07!5 | |ontology_enrichment_celltype=CL:0000039!7.44e-11!7;CL:0000586!7.44e-11!7;CL:0002150!8.18e-11!3;CL:0000861!8.18e-11!3;CL:0002541!9.04e-11!3;CL:0002536!1.32e-07!2;CL:0002537!4.38e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002537;2.57e-23;5!CL:0000349;7.93e-11;19!CL:0002149;2.66e-09;6!CL:0002255;2.66e-09;6!CL:1000415;1.93e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,3.22e-23,5;CL:0000349,8.24e-11,19;CL:0002149,2.66e-09,6;CL:0002255,2.66e-09,6;CL:1000415,1.54e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.80e-09!106;DOID:0050687!7.06e-09!143;DOID:299!1.81e-07!25 | |ontology_enrichment_disease=DOID:305!1.80e-09!106;DOID:0050687!7.06e-09!143;DOID:299!1.81e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:6193;4.83e-14;1!DOID:178;1.33e-13;1!DOID:326;1.33e-13;1!DOID:3978;1.33e-13;1!DOID:3394;1.33e-13;1!DOID:5844;1.33e-13;1!DOID:3001;2.66e-09;6!DOID:299;3.17e-08;25!DOID:3350;1.16e-07;2!DOID:114;1.93e-07;2!DOID:4468;1.93e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,4.53e-14,1;DOID:178,1.61e-13,1;DOID:326,1.61e-13,1;DOID:3978,1.61e-13,1;DOID:3394,1.61e-13,1;DOID:5844,1.61e-13,1;DOID:3001,2.66e-09,6;DOID:299,3.36e-08,25;DOID:3350,1.12e-07,2;DOID:114,2.12e-07,2;DOID:4468,2.40e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.47e-27!14;UBERON:0000158!3.47e-27!14;UBERON:0003124!1.21e-16!7;UBERON:0000478!8.21e-15!24;UBERON:0000305!2.24e-12!7;UBERON:0004871!8.85e-11!8;UBERON:0000476!9.04e-11!3;UBERON:0000920!9.04e-11!3;UBERON:0005795!2.43e-10!22;UBERON:0000995!1.30e-08!21;UBERON:0003133!2.93e-08!48;UBERON:0003975!3.69e-08!22;UBERON:0003134!4.11e-08!37;UBERON:0000474!4.11e-08!37;UBERON:0001987!5.80e-08!4;UBERON:0004340!5.80e-08!4;UBERON:0003127!1.56e-07!2;UBERON:0005156!2.46e-07!59;UBERON:0000990!2.46e-07!59;UBERON:0000341!2.71e-07!2;UBERON:0003100!4.12e-07!41;UBERON:0004175!5.05e-07!25 | |ontology_enrichment_uberon=UBERON:0005631!3.47e-27!14;UBERON:0000158!3.47e-27!14;UBERON:0003124!1.21e-16!7;UBERON:0000478!8.21e-15!24;UBERON:0000305!2.24e-12!7;UBERON:0004871!8.85e-11!8;UBERON:0000476!9.04e-11!3;UBERON:0000920!9.04e-11!3;UBERON:0005795!2.43e-10!22;UBERON:0000995!1.30e-08!21;UBERON:0003133!2.93e-08!48;UBERON:0003975!3.69e-08!22;UBERON:0003134!4.11e-08!37;UBERON:0000474!4.11e-08!37;UBERON:0001987!5.80e-08!4;UBERON:0004340!5.80e-08!4;UBERON:0003127!1.56e-07!2;UBERON:0005156!2.46e-07!59;UBERON:0000990!2.46e-07!59;UBERON:0000341!2.71e-07!2;UBERON:0003100!4.12e-07!41;UBERON:0004175!5.05e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.61e-20;10!UBERON:0000158;2.61e-20;10!UBERON:0000305;7.53e-17;7!UBERON:0000478;1.29e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,8.84e-17,7;UBERON:0004871,9.21e-15,8;UBERON:0005631,1.41e-14,14;UBERON:0000158,1.41e-14,14;UBERON:0000478,1.33e-08,24 | |||
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| ||
|short_description=p@chr19:9047470..9047482,- | |short_description=p@chr19:9047470..9047482,- | ||
}} | }} |
Latest revision as of 18:44, 27 July 2015
Short description: | p@chr19:9047470..9047482, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:9047470..9047482, - |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 3.22e-23 | 5 |
extraembryonic cell | 8.24e-11 | 19 |
epithelial cell of uterus | 2.66e-09 | 6 |
stromal cell of endometrium | 2.66e-09 | 6 |
epithelial cell of gall bladder | 1.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
amnion | 8.84e-17 | 7 |
somatic layer of lateral plate mesoderm | 9.21e-15 | 8 |
extraembryonic membrane | 1.41e-14 | 14 |
membranous layer | 1.41e-14 | 14 |
extraembryonic structure | 1.33e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 4.53e-14 | 1 |
vascular disease | 1.61e-13 | 1 |
ischemia | 1.61e-13 | 1 |
extrinsic cardiomyopathy | 1.61e-13 | 1 |
myocardial ischemia | 1.61e-13 | 1 |
myocardial infarction | 1.61e-13 | 1 |
female reproductive endometrioid cancer | 2.66e-09 | 6 |
adenocarcinoma | 3.36e-08 | 25 |
mesenchymal cell neoplasm | 1.12e-07 | 2 |
heart disease | 2.12e-07 | 2 |
clear cell adenocarcinoma | 2.40e-07 | 2 |