FFCP PHASE1:Hg19::chr19:57323415..57323428,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:57323415..57323428,- | |||
|coexpression_cluster_id=C1457 | |||
|description=CAGE_peak_at_chr19:57323415..57323428,- | |description=CAGE_peak_at_chr19:57323415..57323428,- | ||
|id=chr19:57323415..57323428,- | |id=chr19:57323415..57323428,- | ||
|ontology_enrichment_celltype=CL:0000039!1.11e-09!7;CL:0000586!1.11e-09!7;CL:0002541!5.70e-07!3 | |ontology_enrichment_celltype=CL:0000039!1.11e-09!7;CL:0000586!1.11e-09!7;CL:0002541!5.70e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.14e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.32e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.06e-13;11!UBERON:0009497;2.22e-11;13!UBERON:0000358;1.30e-10;1!UBERON:0003104;3.26e-07;31 | |||
|ontology_enrichment_disease=DOID:3095!2.70e-07!22;DOID:2994!2.70e-07!22 | |ontology_enrichment_disease=DOID:3095!2.70e-07!22;DOID:2994!2.70e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:1799;3.14e-10;1!DOID:10165;3.14e-10;1!DOID:1798;3.14e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,4.75e-10,1;DOID:10165,4.75e-10,1;DOID:1798,4.75e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.90e-33!57;UBERON:0005068!9.90e-33!57;UBERON:0006241!9.90e-33!57;UBERON:0007135!9.90e-33!57;UBERON:0002346!4.54e-32!90;UBERON:0002616!6.63e-29!59;UBERON:0001017!7.01e-29!82;UBERON:0003075!1.58e-28!86;UBERON:0007284!1.58e-28!86;UBERON:0005743!1.62e-28!86;UBERON:0002780!9.40e-27!41;UBERON:0001890!9.40e-27!41;UBERON:0006240!9.40e-27!41;UBERON:0000955!2.84e-26!69;UBERON:0006238!2.84e-26!69;UBERON:0000073!3.29e-26!94;UBERON:0001016!3.29e-26!94;UBERON:0003080!6.02e-26!42;UBERON:0003056!5.89e-25!61;UBERON:0001893!2.51e-23!34;UBERON:0007023!3.00e-22!115;UBERON:0002791!8.96e-22!33;UBERON:0002020!1.96e-21!34;UBERON:0003528!1.96e-21!34;UBERON:0001869!1.05e-20!32;UBERON:0000033!1.66e-18!123;UBERON:0000153!3.24e-18!129;UBERON:0007811!3.24e-18!129;UBERON:0000924!8.88e-18!173;UBERON:0006601!8.88e-18!173;UBERON:0001950!1.21e-16!20;UBERON:0004121!1.80e-15!169;UBERON:0002619!7.24e-15!22;UBERON:0000956!1.33e-14!25;UBERON:0000203!1.33e-14!25;UBERON:0002021!6.76e-11!5;UBERON:0000200!7.06e-09!6;UBERON:0002308!1.78e-08!9;UBERON:0000125!1.78e-08!9;UBERON:0002420!2.55e-08!9;UBERON:0007245!2.55e-08!9;UBERON:0010009!2.55e-08!9;UBERON:0010011!2.55e-08!9;UBERON:0000454!2.55e-08!9;UBERON:0000473!3.99e-08!8;UBERON:0003076!5.94e-08!15;UBERON:0003057!5.94e-08!15;UBERON:0009663!9.37e-08!7;UBERON:0000025!1.27e-07!194;UBERON:0002771!3.25e-07!3;UBERON:0000476!5.70e-07!3;UBERON:0000920!5.70e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!9.90e-33!57;UBERON:0005068!9.90e-33!57;UBERON:0006241!9.90e-33!57;UBERON:0007135!9.90e-33!57;UBERON:0002346!4.54e-32!90;UBERON:0002616!6.63e-29!59;UBERON:0001017!7.01e-29!82;UBERON:0003075!1.58e-28!86;UBERON:0007284!1.58e-28!86;UBERON:0005743!1.62e-28!86;UBERON:0002780!9.40e-27!41;UBERON:0001890!9.40e-27!41;UBERON:0006240!9.40e-27!41;UBERON:0000955!2.84e-26!69;UBERON:0006238!2.84e-26!69;UBERON:0000073!3.29e-26!94;UBERON:0001016!3.29e-26!94;UBERON:0003080!6.02e-26!42;UBERON:0003056!5.89e-25!61;UBERON:0001893!2.51e-23!34;UBERON:0007023!3.00e-22!115;UBERON:0002791!8.96e-22!33;UBERON:0002020!1.96e-21!34;UBERON:0003528!1.96e-21!34;UBERON:0001869!1.05e-20!32;UBERON:0000033!1.66e-18!123;UBERON:0000153!3.24e-18!129;UBERON:0007811!3.24e-18!129;UBERON:0000924!8.88e-18!173;UBERON:0006601!8.88e-18!173;UBERON:0001950!1.21e-16!20;UBERON:0004121!1.80e-15!169;UBERON:0002619!7.24e-15!22;UBERON:0000956!1.33e-14!25;UBERON:0000203!1.33e-14!25;UBERON:0002021!6.76e-11!5;UBERON:0000200!7.06e-09!6;UBERON:0002308!1.78e-08!9;UBERON:0000125!1.78e-08!9;UBERON:0002420!2.55e-08!9;UBERON:0007245!2.55e-08!9;UBERON:0010009!2.55e-08!9;UBERON:0010011!2.55e-08!9;UBERON:0000454!2.55e-08!9;UBERON:0000473!3.99e-08!8;UBERON:0003076!5.94e-08!15;UBERON:0003057!5.94e-08!15;UBERON:0009663!9.37e-08!7;UBERON:0000025!1.27e-07!194;UBERON:0002771!3.25e-07!3;UBERON:0000476!5.70e-07!3;UBERON:0000920!5.70e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0005383;8.34e-13;3!UBERON:0005382;8.34e-13;3!UBERON:0002346;2.45e-10;4!UBERON:0000923;2.45e-10;4!UBERON:0010316;2.45e-10;4!UBERON:0005291;2.45e-10;4!UBERON:0001874;3.14e-10;1!UBERON:0000369;7.82e-10;4!UBERON:0002435;7.82e-10;4!UBERON:0000204;7.82e-10;4!UBERON:0000125;1.41e-09;9!UBERON:0002308;1.41e-09;9!UBERON:0002050;1.93e-08;5!UBERON:0005423;1.93e-08;5!UBERON:0002021;2.45e-08;5!UBERON:0002107;7.72e-08;19!UBERON:0006925;7.72e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,7.40e-13,3;UBERON:0005382,7.40e-13,3;UBERON:0001874,2.08e-10,1;UBERON:0000369,7.16e-10,4;UBERON:0002435,7.16e-10,4;UBERON:0000204,7.16e-10,4;UBERON:0010082,7.16e-10,4;UBERON:0000125,1.33e-09,9;UBERON:0002308,1.33e-09,9;UBERON:0002021,1.97e-08,5;UBERON:0002107,8.15e-08,19;UBERON:0006925,8.15e-08,19;UBERON:0008836,8.15e-08,19;UBERON:0008835,9.11e-07,22;UBERON:0003894,9.11e-07,22 | |||
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|short_description=p@chr19:57323415..57323428,- | |short_description=p@chr19:57323415..57323428,- | ||
}} | }} |
Latest revision as of 17:44, 27 July 2015
Short description: | p@chr19:57323415..57323428, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:57323415..57323428, - |
Coexpression cluster: | C1457_neuroectodermal_putamen_ovary_hepatoblastoma_merkel_choriocarcinoma_hepatocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.32e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
caudate-putamen | 7.40e-13 | 3 |
dorsal striatum | 7.40e-13 | 3 |
putamen | 2.08e-10 | 1 |
corpus striatum | 7.16e-10 | 4 |
striatum | 7.16e-10 | 4 |
ventral part of telencephalon | 7.16e-10 | 4 |
future corpus striatum | 7.16e-10 | 4 |
neural nucleus | 1.33e-09 | 9 |
nucleus of brain | 1.33e-09 | 9 |
occipital lobe | 1.97e-08 | 5 |
liver | 8.15e-08 | 19 |
digestive gland | 8.15e-08 | 19 |
liver bud | 8.15e-08 | 19 |
hepatic diverticulum | 9.11e-07 | 22 |
liver primordium | 9.11e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 4.75e-10 | 1 |
endocrine pancreas cancer | 4.75e-10 | 1 |
pancreatic endocrine carcinoma | 4.75e-10 | 1 |