FFCP PHASE1:Hg19::chr19:56029020..56029035,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:56029020..56029035,+ | |||
|coexpression_cluster_id=C1063 | |coexpression_cluster_id=C1063 | ||
|description=CAGE_peak_at_chr19:56029020..56029035,+ | |description=CAGE_peak_at_chr19:56029020..56029035,+ | ||
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|ontology_enrichment_celltype=CL:0000055!2.27e-11!180;CL:0000057!3.72e-10!75;CL:0002620!1.15e-07!23 | |ontology_enrichment_celltype=CL:0000055!2.27e-11!180;CL:0000057!3.72e-10!75;CL:0002620!1.15e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.11e-10;23!CL:0000134;6.37e-09;55!CL:0002570;3.50e-08;8!CL:0000048;7.13e-08;58!CL:0000723;3.03e-07;61!CL:0000499;5.76e-07;28 | |ontology_enrichment_celltype_v019=CL:0002620;1.11e-10;23!CL:0000134;6.37e-09;55!CL:0002570;3.50e-08;8!CL:0000048;7.13e-08;58!CL:0000723;3.03e-07;61!CL:0000499;5.76e-07;28 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.33e-11,76;CL:0002620,9.78e-11,23;CL:0002570,4.08e-08,8;CL:0000499,6.15e-07,28 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!7.41e-08!14 | |ontology_enrichment_disease=DOID:2394!7.41e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.33e-12;14!DOID:17;9.80e-07;5!DOID:450;9.80e-07;5!DOID:66;9.80e-07;5!DOID:423;9.80e-07;5!DOID:0080000;9.80e-07;5!DOID:11722;9.80e-07;5 | |ontology_enrichment_disease_v019=DOID:2394;1.33e-12;14!DOID:17;9.80e-07;5!DOID:450;9.80e-07;5!DOID:66;9.80e-07;5!DOID:423;9.80e-07;5!DOID:0080000;9.80e-07;5!DOID:11722;9.80e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,1.17e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!3.81e-07!365 | |ontology_enrichment_uberon=UBERON:0000475!3.81e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0000992;2.11e-07;13 | |ontology_enrichment_uberon_v019=UBERON:0000992;2.11e-07;13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,8.36e-09,46;UBERON:0002416,8.36e-09,46;UBERON:0000992,2.30e-07,13;UBERON:0002097,9.75e-07,41 | |||
|phase1_expression=0.181678379270557,2.14100523890983,0.281908808191942,0,0.446961094427288,0,0,3.15859936713415,3.91778442299758,0,0,0.218441372130172,0,2.22779435328084,0.662794751455832,3.36162573225888,4.82155622419182,2.19093027116212,2.92759679274304,0.984968464614303,0.612002073732759,2.5076377718247,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580418477257168,0.56738522469114,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,12.1903433156981,2.68280343881454,0.767175371061182,8.67453965722959,1.00267582127178,21.5821313251627,3.9764297352555,1.45990461090791,0.378139268656271,0.665188192387692,0.43917392846563,1.30979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0.44905874525234,0,0,0,0,0,0,0,4.47274756525787,0.25326102332916,0.794455084879313,8.3182620017156,2.12801029319014,0,0,0.24666754841716,1.55605517699883,0.269421344139376,0.490385709340376,0.605429710579726,0,0.937285727335186,1.5608003841516,0,5.97794722207204,0,0,0,0,0.859840221182376,0.309977343527296,0,3.4617370098998,0,0.718618141816238,0,0,0,0,1.5324389789951,0.600952235626387,0.794025282120147,8.61070251306537,5.76604949810132,4.02670612203168,4.20127534518163,1.44273540933814,20.6112432036503,3.7223371266318,10.4641325989585,2.24105111870757,17.4179304228439,1.47279837827679,2.90962902273861,12.7803453305981,0.705264687593482,3.05209066158878,0,0,0,0.487894824518382,0.132529768321485,0.348581828608555,0.207322110030741,0,0.36497735907583,0,15.4377825166292,0,11.1448302727675,8.66255378003503,0.118306800039844,0,0,0,0,0,0,0,0,0,0,3.7041661019826,4.41026134156626,1.26755034821831,0,1.18157981336281,0,0.122988438543114,2.05881372358231,0,0,0,0,0,0,0,2.66639931442677,1.76113041353732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4486426652716,0.264145302039678,0,0.144119953416961,0,0.761974731506028,0.763976851116555,0,0,0.616964956219941,12.6144084294445,0,0.112131084345361,0.43596006883328,0.4400297149257,0.129271715757778,28.6125156681506,4.22651376278,5.58470044828228,2.08014873822732,0.771622122786426,0,0.532844358032199,4.57529579706072,7.5967024754802,0,0.977208552881205,1.42156779497018,0,0.904318131178758,1.74306691720059,7.99783929456456,0,0,2.10833939483032,0.239624855491583,0,0,0.434343920002738,0.410952645100767,0,0,0.197030760201927,0,0,0.254094624222463,0,1.54657762555539,0.167516265334349,0,0,0,0,5.39842563564216,3.50119364741774,0.542530047399471,3.11956292296211,17.1291829245275,2.05013139544115,10.8941515943223,0,2.27407504055985,1.03473071292505,5.31380478828349,0,3.12781012085098,4.50342662164303,4.11772108573027,0,0,0.106727557803444,0,0,0,0,3.6830873589135,2.24528075546459,0.896974044789907,0.511707249066704,2.41280881715411,0,2.31314540703983,3.37367278094941,1.72467027628999,3.11552657510173,1.04589340613963,0.120859449591622,0,0,0,0,1.44236856455367,0.451199612907412,0.231046011313244,1.56869953835371,0,0.633309773357254,0,0,0.215915916102139,0,0.812839312631559,2.00675909541941,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0.656029291399411,0,0,0,0,0,0,3.21367859688319,1.35339005608971,0,0.307007349452259,0.137836572484531,0.966782203814463,0.870100163485371,0.340906509664404,4.00644160410318,0,0,0,0,3.253918845081,7.870308670766,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0.38126038784765,0,3.42351190427136,0,0,0.179872457583315,0,0.589062011728432,0,0,0,0,2.43713489631284,0,1.50149902548784,2.68670320712054,1.13008116620243,0,1.32687795048244,0,1.15755106853338,0,0,0,0,0.430234056612155,0.294747123039363,0,1.06428319221179,6.12212142363226,14.4889752902357,0.379473173765715,0,0,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,1.05836791361941,0.649243880549111,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0.835218521685727,0,0,0.66614393599564,0,0,0.439524537815682,0,0.222886768554957,0,0,0,0,1.9882952955326,0.703347082052564,0.222617410045812,0,0,2.59022384726391,0,0,0.20453736500431,0,0.933118762985422,0,0,0,1.7755813014648,0,0,0,0.649376687132959,0,0,0,0,0,0.254253650292766,0.236387681767936,0,0,0.173624994933292,0.885741385813839,0.241192877250816,1.52581736317083,1.10579259931225,0,0,0.10893846351899,0,3.92446318369365,0,0,0,0,0.31900115973192,0.183195186803725,0.533034776018635,0,0.627921025580099,0,0,0,0,0,0.317873157960757,0,0,0,0,2.98578579323551,0.796118080530053,0,0,0.123563938946503,0,0.337005664903385,1.60515529459758,0,0,0,0,3.55125962564451,1.20990716048664,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0,2.35746944122336,0,0,0.0870592065804026,1.22308667769421,11.8670362405415,0,0.0730893170861856,0,0.581934098930517,0.353024506766001,0.90392296312213,0,0,0.189932387867636,0.195551382734803,0.561111741760736,1.49417096317547,0,0,0,0,0,0,0,1.63085047288337,0.836822770498666,0,0.57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| ||
|short_description=p@chr19:56029020..56029035,+ | |short_description=p@chr19:56029020..56029035,+ | ||
}} | }} |
Latest revision as of 17:32, 27 July 2015
Short description: | p@chr19:56029020..56029035, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:56029020..56029035, + |
Coexpression cluster: | C1063_tenocyte_Mesenchymal_Fibroblast_Chondrocyte_mesenchymal_Olfactory_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.33e-11 | 76 |
skin fibroblast | 9.78e-11 | 23 |
mesenchymal stem cell of adipose | 4.08e-08 | 8 |
stromal cell | 6.15e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
integument | 8.36e-09 | 46 |
integumental system | 8.36e-09 | 46 |
female gonad | 2.30e-07 | 13 |
skin of body | 9.75e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.17e-12 | 14 |