FFCP PHASE1:Hg19::chr19:56028889..56028917,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:56028889..56028917,+ | |||
|coexpression_cluster_id=C1063 | |coexpression_cluster_id=C1063 | ||
|description=CAGE_peak_at_chr19:56028889..56028917,+ | |description=CAGE_peak_at_chr19:56028889..56028917,+ | ||
|id=chr19:56028889..56028917,+ | |id=chr19:56028889..56028917,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.47e-16!180;CL:0000057!1.73e-14!75;CL:0002620!1.09e-07!23 | |ontology_enrichment_celltype=CL:0000055!4.47e-16!180;CL:0000057!1.73e-14!75;CL:0002620!1.09e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.16e-12;23!CL:0002334;2.02e-08;12!CL:0000057;6.45e-08;73!CL:0000499;2.29e-07;28!CL:0002320;5.58e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.91e-20,76;CL:0002620,1.38e-12,23;CL:0002334,2.21e-08,12;CL:0000499,2.38e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.34e-07!14 | |ontology_enrichment_disease=DOID:2394!7.34e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;6.00e-10;14!DOID:17;3.17e-07;5!DOID:450;3.17e-07;5!DOID:66;3.17e-07;5!DOID:423;3.17e-07;5!DOID:0080000;3.17e-07;5!DOID:11722;3.17e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.01e-10,14;DOID:17,3.73e-07,5;DOID:450,3.73e-07,5;DOID:66,3.73e-07,5;DOID:423,3.73e-07,5;DOID:0080000,3.73e-07,5;DOID:11722,3.73e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.37e-09!115;UBERON:0000475!1.50e-07!365 | |ontology_enrichment_uberon=UBERON:0007023!3.37e-09!115;UBERON:0000475!1.50e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;4.38e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.84e-09,46;UBERON:0002416,1.84e-09,46;UBERON:0002097,1.82e-07,41;UBERON:0001013,4.49e-07,14 | |||
|phase1_expression=0,1.71280419112787,0.845726424575827,1.0007329835313,0.446961094427288,0,0,2.52687949370732,4.17897005119742,0,0,0.218441372130172,0,1.11389717664042,0.994192127183747,1.34465029290355,3.01347264011988,1.46062018077475,1.95173119516203,0.861847406537515,0.612002073732759,1.25381888591235,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0.619412741790207,0.28769239232215,0.256160706529101,0,0,0.645484683583826,0,0.188242339542605,0,0,0,0,0,0,0,0.426224750532694,0.580418477257168,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,2.43806866313962,0,0.383587685530591,7.59022220007589,4.01070328508712,13.0361867064741,1.5905718941022,6.8128881842369,0.567208902984407,0.886917589850256,1.14185221401064,2.16115474571226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,3.47880366186723,0.379891534993739,0.529636723252875,9.46560848471085,2.83734705758686,1.12135520028461,0,1.2333377420858,1.24484414159907,0.269421344139376,0.163461903113459,1.96764655938411,1.15235184896,0,0.624320153660641,0,3.73621701379503,0,0,0,0.204154171254893,0.245668634623536,0.723280468230358,0,3.4617370098998,1.82032272387605,3.59309070908119,0.168336113954066,0,0.277064115484183,0.438977620880838,0.919463387397059,1.05166641234618,0,17.9389635688862,7.04739383101272,6.14602513362729,4.50136644126603,3.09157587715317,18.8077594233309,8.74749224758472,10.9704615956823,3.70260619612555,18.9325330683086,2.39329736469978,4.84938170456436,21.6555851435135,2.61955455391865,2.54340888465731,0,0,0,0.243947412259191,0.265059536642971,0.464775771478074,0.414644220061482,0.504641701751257,0,0,9.64861407289328,0,6.03678306441573,2.88751792667834,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,2.057870056657,5.88034845542168,0,0,1.18157981336281,0,0.122988438543114,0.857839051492628,0,0,0.100528972411631,0.185176890317059,0,0,0,0.927443239800615,0.587043471179108,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,4.92663237895944,0.352193736052904,0.414656231081544,0.144119953416961,0.25248486685276,0.253991577168676,0.381988425558278,0,0,0.102827492703324,2.70308752059526,0.285826432630578,0.784917590417525,0,0.66004457238855,0.517086863031111,32.1890801266694,0.845302752556,1.86156681609409,1.04007436911366,0.771622122786426,0,0,2.85955987316295,5.42621605391443,0,0.977208552881205,0.355391948742546,0,0.904318131178758,0.871533458600294,12.5965968889392,0,0,0,0,1.14861935834114,1.42636905040718,0.144781306667579,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,6.37995756939527,1.00034104211935,0.271265023699736,1.66376689224646,12.6684582045985,1.26161932027148,7.37990914454093,0.601892199455438,0,1.03473071292505,2.65690239414175,0,3.38846096425523,5.09083009403126,5.83343820478455,0,0.431428401637234,0,0,0,0.604780586659361,2.97729369382532,2.60885354589706,3.92924132206303,1.28139149255701,1.02341449813341,1.28683136914886,1.48418066444991,2.62156479464514,2.30830242907065,1.39616165223476,3.63478100428535,0.697262270759755,0,0,0,0.34444334449382,0.182091168006717,1.44236856455367,0,0.0770153371044148,0,0,0.527758144464379,0,0.170093705276516,0,0,1.62567862526312,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0.870036464629098,0.308097234229289,0.614014698904518,0,0.966782203814463,1.16013355131383,0.511359764496605,4.80772992492382,0,0,0,0,1.39453664789186,14.7961803010401,0.6970372701606,0.924100740528266,0,0,0.37064843820784,0,0,0.316379424718726,0.38126038784765,1.27948895655667,1.28381696410176,0.636406495851874,0.78494864019923,0.899362287916574,0.274537029736055,0.353437207037059,0,0,0,0.975267478179181,0.974853958525138,0,0.9554993798559,2.82810863907426,5.65040583101214,1.10273068709225,1.32687795048244,0,2.31510213706675,1.9676842561399,0,0,0.281695602532241,0.286822704408103,0.196498082026242,0,0.709522128141196,4.22215270595328,5.59801318031833,0,0.349934720244983,0,0,0,0.376575203107117,0,0,0,0.229723400206959,0,0,0,0,0,0.648473311192717,0,0,0.854592569019785,0,0,0,0,0.0711418433484141,0,0.199579371432817,0,1.2700414963433,0,0,0,0.156679895773023,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0,0,0.556812347790485,0,0,0.33307196799782,0,0,2.4906390476222,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0.222617410045812,0,0,3.58646378851925,0.276283915531148,0.503865495708552,0,0,0,0,0,0,3.05794557474494,0,0,0.969332746095218,0.74214478529481,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0.844175070377856,1.52581736317083,1.3269511191747,0.295547618953547,0,0,0,5.84821964628858,0,0,0,0,0,0.732780747214898,0,0,0.784901281975124,0,0,0,0,0,0.635746315921515,0,0,0,0,2.98578579323551,0.619202951523374,2.4441205797345,0,0,0.104421949505455,0.67401132980677,0.802577647298789,0.468528891450678,0,0,0,1.18375320854817,0,0,0.821425535170343,0,0,0,0,0,0,0,1.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| ||
|short_description=p@chr19:56028889..56028917,+ | |short_description=p@chr19:56028889..56028917,+ | ||
}} | }} |
Latest revision as of 17:32, 27 July 2015
Short description: | p@chr19:56028889..56028917, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:56028889..56028917, + |
Coexpression cluster: | C1063_tenocyte_Mesenchymal_Fibroblast_Chondrocyte_mesenchymal_Olfactory_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.91e-20 | 76 |
skin fibroblast | 1.38e-12 | 23 |
preadipocyte | 2.21e-08 | 12 |
stromal cell | 2.38e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
integument | 1.84e-09 | 46 |
integumental system | 1.84e-09 | 46 |
skin of body | 1.82e-07 | 41 |
adipose tissue | 4.49e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.01e-10 | 14 |
musculoskeletal system disease | 3.73e-07 | 5 |
myotonic disease | 3.73e-07 | 5 |
muscle tissue disease | 3.73e-07 | 5 |
myopathy | 3.73e-07 | 5 |
muscular disease | 3.73e-07 | 5 |
myotonic dystrophy | 3.73e-07 | 5 |