FFCP PHASE1:Hg19::chr19:48245073..48245093,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-385bp_to_CU677000_5end | |association_with_transcript=-385bp_to_CU677000_5end | ||
|cluster_id=chr19:48245073..48245093,- | |||
|description=CAGE_peak_3_at_CU677000_5end | |description=CAGE_peak_3_at_CU677000_5end | ||
|id=chr19:48245073..48245093,- | |id=chr19:48245073..48245093,- | ||
|ontology_enrichment_celltype=CL:0000055!5.08e-20!180;CL:0000222!4.43e-16!119;CL:0000057!1.97e-13!75;CL:0000183!6.07e-13!59;CL:0000680!1.24e-12!57;CL:0000056!1.24e-12!57;CL:0000355!1.24e-12!57;CL:0000192!6.99e-12!42;CL:0000514!6.99e-12!42;CL:0000187!8.67e-12!54;CL:0000220!1.59e-10!246;CL:0002321!2.26e-10!248;CL:0000393!2.94e-10!60;CL:0000211!2.94e-10!60;CL:0000359!1.27e-07!32 | |ontology_enrichment_celltype=CL:0000055!5.08e-20!180;CL:0000222!4.43e-16!119;CL:0000057!1.97e-13!75;CL:0000183!6.07e-13!59;CL:0000680!1.24e-12!57;CL:0000056!1.24e-12!57;CL:0000355!1.24e-12!57;CL:0000192!6.99e-12!42;CL:0000514!6.99e-12!42;CL:0000187!8.67e-12!54;CL:0000220!1.59e-10!246;CL:0002321!2.26e-10!248;CL:0000393!2.94e-10!60;CL:0000211!2.94e-10!60;CL:0000359!1.27e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000135;8.56e-07;3!CL:0000388;8.56e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.37e-08,76;CL:0000135,4.41e-07,3;CL:0000388,4.41e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.08e-13!79;UBERON:0007798!2.08e-13!79;UBERON:0001134!1.18e-11!61;UBERON:0002036!1.18e-11!61;UBERON:0003082!1.18e-11!61;UBERON:0000486!1.86e-11!82;UBERON:0002385!2.85e-11!63;UBERON:0001015!2.85e-11!63;UBERON:0000383!2.85e-11!63;UBERON:0004290!7.16e-11!70;UBERON:0000914!8.25e-11!83;UBERON:0002329!8.25e-11!83;UBERON:0003077!8.25e-11!83;UBERON:0003059!8.25e-11!83;UBERON:0007282!8.25e-11!83;UBERON:0009618!8.25e-11!83;UBERON:0007285!8.25e-11!83;UBERON:0005256!1.64e-10!143;UBERON:0000055!2.93e-10!69;UBERON:0004872!1.76e-09!84;UBERON:0002100!2.46e-09!216;UBERON:0000490!2.57e-09!138;UBERON:0001981!3.38e-09!60;UBERON:0007500!3.38e-09!60;UBERON:0004537!3.38e-09!60;UBERON:0006965!3.38e-09!60;UBERON:0000475!3.64e-09!365;UBERON:0004535!8.93e-09!110;UBERON:0001009!9.19e-09!113;UBERON:0001637!1.69e-08!42;UBERON:0003509!1.69e-08!42;UBERON:0004572!1.69e-08!42;UBERON:0000481!3.20e-08!347;UBERON:0000119!3.40e-08!312;UBERON:0000483!7.48e-08!309;UBERON:0003104!9.16e-08!238;UBERON:0009142!9.16e-08!238;UBERON:0000477!1.05e-07!286;UBERON:0000468!8.37e-07!659;UBERON:0003914!9.13e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;2.00e-08;8!UBERON:0000982;2.00e-08;8!UBERON:0004770;2.00e-08;8!UBERON:0004457;2.16e-07;9!UBERON:0000042;2.16e-07;9!UBERON:0007846;8.56e-07;3!UBERON:0000043;8.56e-07;3!UBERON:0007845;8.56e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,8.85e-09,8;UBERON:0000982,8.85e-09,8;UBERON:0004770,8.85e-09,8;UBERON:0000055,1.39e-07,68;UBERON:0007846,4.41e-07,3;UBERON:0000043,4.41e-07,3;UBERON:0007845,4.41e-07,3;UBERON:0011135,8.75e-07,5;UBERON:0002216,8.75e-07,5;UBERON:0011134,8.75e-07,5;UBERON:0002209,8.75e-07,5;UBERON:0002213,8.75e-07,5;UBERON:0005856,8.75e-07,5;UBERON:0005866,8.75e-07,5;UBERON:0005863,8.75e-07,5;UBERON:0007844,8.75e-07,5;UBERON:0011138,8.75e-07,5;UBERON:0001130,8.75e-07,5;UBERON:0001066,8.75e-07,5;UBERON:0001468,8.75e-07,5 | |||
|phase1_expression=0.181678379270557,2.35510576280081,0.140954404095971,2.00146596706261,2.68176656656373,2.61701557230111,0,0,1.82829939739887,0,2.09340350391728,0.218441372130172,0.263766978228454,1.48519623552056,1.98838425436749,1.34465029290355,1.20538905604795,0,1.46379839637152,0.369363174230364,1.02000345622126,0,0,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,1.0843174571537,0,4.05570253090306,0,0.973269740605272,0.189069634328136,0.665188192387692,0.527008714158756,0.130979075497713,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0.198762407366705,1.72046919021225,0,0,2.09749718104953,2.20094433552054,0.208994966536811,0.516833518338658,1.06729878806013,0,1.61131726843659,0,2.4406205754817,0.367663080345869,1.62028389576352,0.17859945656816,0.44905874525234,0.112611480483322,0,0,0.183201743930407,0,0,0.872188104285069,1.49091585508596,0.633152558322899,0,1.14734648299525,1.77334191099179,0.560677600142307,0,4.19334832309172,0.311211035399766,0.538842688278752,0.980771418680752,0.605429710579726,0.576175924479999,0,0.936480230490962,0,2.09228152772521,0,0.161872944368132,0,0.61246251376468,2.94802361548243,0.413303124703062,1.18800285728205,3.21447008062124,1.82032272387605,3.59309070908119,0,0.375355559615893,0,0,1.83892677479412,0.751190294532984,0.567160915800105,0.538168907066586,0.427114777637135,0.423863802319124,0.900273288253207,0.412210116953756,0.257640540045629,0.18611685633159,0.675105328965065,0.292311015483596,1.51460264546469,0.0920498986422993,0,1.06502877754984,0.403008392910561,0.847802961552438,0.386521706326594,0,0.573609190778008,0,0.132529768321485,0,0.10366105501537,0,0,0,4.5026865673502,0,1.39310378409594,3.60939740834793,0.473227200159376,0,0,0.661763836394364,0.217879444092406,0.474541238222193,0.269662616320329,0.196221465125346,0.38474715694639,0.738155454624648,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0,0,0,0.343135620597051,0.658501712451753,0,0.703702806881416,0.277765335475589,0,1.03993478527958,0,0.115930404975077,0.234817388471643,0.433099343283221,0,1.52203321787679,0,0,0,0,0,0,0,0,0.358234090811393,0.871901815541886,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0.308482478109971,0.300343057843917,0,0.112131084345361,0.43596006883328,0.4400297149257,0.129271715757778,0,1.690605505112,0.797814349754612,1.04007436911366,0.514414748524284,2.83698264046557,0.799266537048298,0.714889968290738,1.08524321078289,0,0.325736184293735,0.355391948742546,1.58390374586686,0.602878754119172,0,0.399891964728228,0,0,0,1.4377491329495,1.14861935834114,0,0.723906533337896,1.43833425785268,0.179060963239896,0,0,0,0,0,0,0,0.670065061337395,0,0,0,0,0.858840442033979,2.00068208423871,2.98391526069709,1.66376689224646,4.28229573113188,2.52323864054295,1.63997980989798,0,0,0,0,0.368738337083406,0.60818530127658,1.37060810223918,1.71571711905428,0,0,0,0.909382714338778,0,1.81434175997808,0,0.767309866440312,1.68396056659844,0.640695746278505,1.02341449813341,1.60853921143608,2.96836132889982,0.462629081407967,2.13074070375753,0.739144404124282,0.519254429183621,2.78904908303902,0.120859449591622,1.60405176242628,0.828728900423067,0.803701137152247,2.91345868810747,2.22911505431021,0,0.693138033939733,0,0,0.527758144464379,0,0.510281115829547,0.215915916102139,1.54227252690289,0,1.00337954770971,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0,0.650756789328606,0.206082023295445,0,0.082509499920588,0,0.650060246036521,1.6068392984416,0.290012154876366,0.616194468458578,0.921022048356777,0.275673144969061,0.214840489736547,0.725083469571143,0.0852266274161009,0.267096106940212,0.330569830721956,0,0,0.30347334256665,0.464845549297286,0,0.6970372701606,1.54016790088044,0,0,1.66791797193528,0,0.372158369359667,0.632758849437452,0.953150969619124,0.767693373934002,0,0.95460974377781,3.13979456079692,0.899362287916574,2.74537029736055,1.17812402345686,0.202182481573316,4.75530963519025,0.842516912477962,0.48763373908959,0.731140468893853,1.05650146756755,0.682499557039929,2.54529777516683,0,0.551365343546124,1.32687795048244,0.876901770507525,0.578775534266688,1.31178950409327,0.405820753925408,0.92947049429925,0.281695602532241,0.430234056612155,0.982490410131212,0.7133421029625,1.06428319221179,2.11107635297664,1.97576935775941,0.379473173765715,0.699869440489966,0.0962221127255121,1.34060455107157,0,0.0941438007767792,0.43050537267123,0,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0.307160702099232,0,0,0.333926115068718,0,0,0.19924798825107,0.276283915531148,0,0,0,1.24415835064723,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0.341380344856499,0,0.236387681767936,0,0,0,0,0.1205964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| ||
|short_description=p3@CU677000 | |short_description=p3@CU677000 | ||
}} | }} |
Latest revision as of 15:34, 27 July 2015
Short description: | p3@CU677000 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CU677000_5end |
Coexpression cluster: | NA |
Association with transcript: | -385bp_to_CU677000_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.37e-08 | 76 |
fibrocyte | 4.41e-07 | 3 |
tendon cell | 4.41e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
articulation | 8.85e-09 | 8 |
skeletal joint | 8.85e-09 | 8 |
articular system | 8.85e-09 | 8 |
vessel | 1.39e-07 | 68 |
dense regular connective tissue | 4.41e-07 | 3 |
tendon | 4.41e-07 | 3 |
regular connective tissue | 4.41e-07 | 3 |
intervertebral cartilage | 8.75e-07 | 5 |
symphysis | 8.75e-07 | 5 |
nonsynovial joint | 8.75e-07 | 5 |
fibrous joint | 8.75e-07 | 5 |
cartilaginous joint | 8.75e-07 | 5 |
developing mesenchymal condensation | 8.75e-07 | 5 |
pre-cartilage condensation | 8.75e-07 | 5 |
cartilaginous condensation | 8.75e-07 | 5 |
cartilage element | 8.75e-07 | 5 |
post-cranial axial skeletal system | 8.75e-07 | 5 |
vertebral column | 8.75e-07 | 5 |
intervertebral disk | 8.75e-07 | 5 |
intervertebral joint | 8.75e-07 | 5 |