FFCP PHASE1:Hg19::chr19:46706366..46706388,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-47bp_to_ENST00000379355,uc002pec.2_5end | |||
|cluster_id=chr19:46706366..46706388,- | |||
|description=CAGE_peak_2_at_ENST00000379355_5end,CAGE_peak_2_at_uc002pec.2_5end | |||
|id=chr19:46706366..46706388,- | |||
|ontology_enrichment_celltype=CL:0000066!4.78e-19!254;CL:0000150!1.79e-08!9;CL:0002150!5.46e-08!3;CL:0000861!5.46e-08!3;CL:0000223!1.11e-07!59;CL:0002541!1.68e-07!3;CL:0000622!4.30e-07!5;CL:0002251!4.53e-07!21;CL:0002623!6.28e-07!3;CL:0002076!6.57e-07!43 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.80e-14,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.47e-20;29!UBERON:0000358;9.47e-07;1 | |||
|ontology_enrichment_disease=DOID:305!1.34e-38!106;DOID:0050687!4.77e-32!143;DOID:162!3.97e-24!235;DOID:14566!2.81e-23!239;DOID:1749!5.58e-10!14;DOID:170!8.31e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.99e-13;14!DOID:305;2.96e-09;106!DOID:170;1.06e-08;6!DOID:178;4.85e-07;1!DOID:326;4.85e-07;1!DOID:3978;4.85e-07;1!DOID:3394;4.85e-07;1!DOID:5844;4.85e-07;1!DOID:3151;5.43e-07;1!DOID:3149;5.43e-07;1!DOID:3111;6.42e-07;1!DOID:3603;6.42e-07;1!DOID:1799;9.47e-07;1!DOID:10165;9.47e-07;1!DOID:1798;9.47e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.56e-36,106;DOID:0050687,3.58e-25,143;DOID:162,5.48e-18,235;DOID:14566,1.77e-17,239;DOID:1749,1.72e-13,14;DOID:170,1.04e-08,6;DOID:178,4.85e-07,1;DOID:326,4.85e-07,1;DOID:3978,4.85e-07,1;DOID:3394,4.85e-07,1;DOID:5844,4.85e-07,1;DOID:3151,5.13e-07,1;DOID:3149,5.13e-07,1;DOID:3111,6.43e-07,1;DOID:3603,6.43e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.45e-21!9;UBERON:0001557!4.00e-15!19;UBERON:0001007!4.40e-12!155;UBERON:0001555!4.40e-12!155;UBERON:0007026!4.40e-12!155;UBERON:0000077!1.49e-11!130;UBERON:0004119!5.07e-11!169;UBERON:0000925!5.07e-11!169;UBERON:0006595!5.07e-11!169;UBERON:0004921!1.30e-10!129;UBERON:0004185!1.30e-10!129;UBERON:0001004!1.01e-09!72;UBERON:0001041!1.48e-09!98;UBERON:0000072!4.68e-09!46;UBERON:0008947!7.68e-08!38;UBERON:0003258!7.68e-08!38;UBERON:0000476!1.68e-07!3;UBERON:0000920!1.68e-07!3;UBERON:0000065!2.38e-07!53;UBERON:0005631!3.59e-07!14;UBERON:0000158!3.59e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.53e-37;9!UBERON:0001557;7.53e-37;9!UBERON:0000072;2.06e-13;37!UBERON:0000065;2.08e-10;44!UBERON:0001004;4.70e-07;65!UBERON:0000997;5.43e-07;1!UBERON:0005056;5.43e-07;1!UBERON:0004176;5.43e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.33e-36,9;UBERON:0001557,1.02e-16,19;UBERON:0008947,1.17e-14,38;UBERON:0003258,1.17e-14,38;UBERON:0000072,1.89e-11,47;UBERON:0000065,1.07e-09,54;UBERON:0001004,1.94e-09,74;UBERON:0000997,5.75e-07,1;UBERON:0005056,5.75e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60274960087657,2.02301628093722,1.20505514941741,3.19852520923942,2.17879444092406,2.60997681022206,1.07865046528132,2.74710051175484,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,0.329250856225877,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92064345569651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90995587790152,0,4.30024982938925,0,0,0,0,0,0,0,0,1.1249555075237,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0.113942055847001,0,0.987334088507493,0.54323685961004,0.638002319463839,0.183195186803725,2.66517388009317,0,0,0,0,0.19606253431774,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76098157038881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.21367308881824,1.48000651186684,0,0,1.83837029449262,1.31560770755134,1.56019368401098,0.0969890164884194,0,0,0,0,0,1.75996244461323,0.240476460754601,0,1.59847687665704,0,0,0,0.432164393964449,0,0.235694034616795,0.271808412147228,0,0,0,0,0,0,0,0,0,0,0,6.58940701646671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.36065093879046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,2.22412889249628,1.40963004463334,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7498096548455,0.428883182749851,0,0.226705925512272,0,0,0,0,1.31570429747224,0,1.3503982678964,0,0,2.07258205038719,0,0,0,0,0,0.327609848846413,1.2288645437686,3.38099397373803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.55554759116697,2.20114318226015,0,0,0,0,0,0.20170506870352,0,2.09525355585138,0.163771917510097,0,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0.266107110487916,0,0.171488009437418,0,0,0.236387681767936,0,0,0,0.560544326627578,0,9.93266919605658,0,0,0,0,0,0,0.207216164163037,0.17071847709395,0.691259661814092,0,0,0,0,0.68732060563215,1.86123831398592,0.955538938977433,0,0.392600934460972,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.892769693028288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0.112131862580613,0,0,0.217716747896961,0,0.0673520530145875,0,0,0.651226148887796,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p2@ENST00000379355,p2@uc002pec.2 | |||
}} |
Latest revision as of 15:13, 27 July 2015
Short description: | p2@ENST00000379355, p2@uc002pec.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000379355_5end, CAGE_peak_2_at_uc002pec.2_5end |
Coexpression cluster: | NA |
Association with transcript: | -47bp_to_ENST00000379355, uc002pec.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.80e-14 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.33e-36 | 9 |
upper respiratory tract | 1.02e-16 | 19 |
respiratory primordium | 1.17e-14 | 38 |
endoderm of foregut | 1.17e-14 | 38 |
segment of respiratory tract | 1.89e-11 | 47 |
respiratory tract | 1.07e-09 | 54 |
respiratory system | 1.94e-09 | 74 |
mammalian vulva | 5.75e-07 | 1 |
external female genitalia | 5.75e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.56e-36 | 106 |
cell type cancer | 3.58e-25 | 143 |
cancer | 5.48e-18 | 235 |
disease of cellular proliferation | 1.77e-17 | 239 |
squamous cell carcinoma | 1.72e-13 | 14 |
endocrine gland cancer | 1.04e-08 | 6 |
vascular disease | 4.85e-07 | 1 |
ischemia | 4.85e-07 | 1 |
extrinsic cardiomyopathy | 4.85e-07 | 1 |
myocardial ischemia | 4.85e-07 | 1 |
myocardial infarction | 4.85e-07 | 1 |
skin squamous cell carcinoma | 5.13e-07 | 1 |
keratoacanthoma | 5.13e-07 | 1 |
cystadenocarcinoma | 6.43e-07 | 1 |
mucinous cystadenocarcinoma | 6.43e-07 | 1 |