FFCP PHASE1:Hg19::chr19:45091091..45091104,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:45091091..45091104,- | |||
|description=CAGE_peak_at_chr19:45091091..45091104,- | |||
|id=chr19:45091091..45091104,- | |||
|ontology_enrichment_celltype=CL:0000548!6.54e-10!679;CL:0000004!6.54e-10!679;CL:0000255!6.54e-10!679;CL:0000012!1.25e-09!682;CL:0000066!2.37e-09!254 | |||
|ontology_enrichment_celltype_v019=CL:0002368;2.23e-09;13!CL:0002202;4.22e-09;9!CL:0002632;4.22e-09;9!CL:0000322;6.22e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,2.76e-09,13;CL:0002202,4.81e-09,9;CL:0002632,4.81e-09,9;CL:0000322,6.45e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!5.55e-25!239;DOID:162!1.02e-24!235;DOID:0050687!1.09e-14!143;DOID:305!2.76e-13!106;DOID:0050686!4.37e-10!137;DOID:8692!4.04e-08!31;DOID:2531!5.15e-07!51;DOID:0060083!5.15e-07!51;DOID:1240!9.98e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:3910;1.71e-11;2!DOID:4929;3.41e-11;2!DOID:1325;4.49e-07;7!DOID:3904;4.49e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.81e-11,2;DOID:4929,2.11e-11,2;DOID:162,1.37e-08,235;DOID:14566,2.69e-08,239;DOID:1325,4.55e-07,7;DOID:3904,4.55e-07,7 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.71e-11;2!UBERON:0002173;1.71e-11;2!UBERON:0002186;1.71e-11;2!UBERON:0004821;6.22e-08;3!UBERON:0007499;6.22e-08;3!UBERON:0003215;6.22e-08;3!UBERON:0010368;6.22e-08;3!UBERON:0009911;6.22e-08;3!UBERON:0002299;6.22e-08;3!UBERON:0006524;6.22e-08;3!UBERON:0008874;6.22e-08;3!UBERON:0002169;6.22e-08;3!UBERON:0004894;6.22e-08;3!UBERON:0004913;9.89e-07;1!UBERON:0003703;9.89e-07;1!UBERON:0001174;9.89e-07;1!UBERON:0004914;9.89e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.81e-11,2;UBERON:0002173,1.81e-11,2;UBERON:0002186,1.81e-11,2;UBERON:0000058,5.96e-09,19;UBERON:0004821,6.45e-08,3;UBERON:0003215,6.45e-08,3;UBERON:0010368,6.45e-08,3;UBERON:0009911,6.45e-08,3;UBERON:0002299,6.45e-08,3;UBERON:0006524,6.45e-08,3;UBERON:0008874,6.45e-08,3;UBERON:0002169,6.45e-08,3;UBERON:0004894,6.45e-08,3;UBERON:0004913,9.91e-07,1;UBERON:0003703,9.91e-07,1;UBERON:0001174,9.91e-07,1;UBERON:0004914,9.91e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0.672325146451775,0,0,0,0,0.408001382488506,0,0,0.273748850145768,0,0,0,0,0,0,0.154816123316076,0,0,1.47901604066715,0.232401601740905,0,0.293600439334847,0,0,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434377689410233,0,0,0,0,0,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973269740605272,0.189069634328136,2.4390233720882,0.790513071238134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0.573673241497627,0.354668382198357,0,0,0,0,1.21239604862719,0,0,0.576175924479999,0,0,0,0,1.05691048779388,0.323745888736263,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0.900273288253207,0.103052529238439,1.03056216018252,0,0.168776332241266,0.0974370051611986,0.504867548488229,0,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0,0.10366105501537,0.504641701751257,0.36497735907583,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.716468181622786,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0.43596006883328,0.1466765716419,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,1.14861935834114,0,0,0.205476322550383,0,0.448340575974109,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0.356857977594324,0.315404830067869,0.234282829985426,0,0,0,0,0.184369168541703,0,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0.182091168006717,0.131124414959424,0,0.308061348417659,0,1.46139224653261,0,0,0.340187410553031,1.0795795805107,0,0,1.50506932156456,0,0,0.671624264166535,0,0,0.256450125116389,0,0.325378394664303,0,0,0,0,0,0,0.096670718292122,0.924291702687866,0.307007349452259,1.51620229732984,0.107420244868274,0,0.255679882248303,0.0890320356467374,0,1.15314040419064,0.127612712494584,0,0,0,0,0,0,0,0,0.429374660225974,0,0,0,0,0,0,1.56989728039846,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845086807596724,0,0,0,0,0,0,0,0,0.192444225451024,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0.798317485731266,0.383010740264733,2.11673582723883,0,0,0,0.313359791546046,2.50634477090067,0,0.802940375518498,0.201799707191048,0,1.03051603426729,0,0.223676107892416,0.166849141711909,0.781552381608161,0,0,0,0.33307196799782,0,0.748562161632879,0,0,0.111443384277478,3.69376990848337,0,0,0,0,0,0,0.988823245360557,0,0,0,0,0,0,0,0.269605053441981,0,2.04628948090749,0,0,0,0,0,0,0,0,0,3.86897724170699,2.03402920234213,1.41832609060762,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0.455768223388005,0,0,0,0.31900115973192,0.0915975934018623,0,0,0.31396051279005,0,0.676786981851542,0.19606253431774,0.335643173951685,0.189753732724185,0.158936578980379,0,0.163232808159148,0,0,0,0,0,0.296521128680622,0.247127877893006,0.208843899010911,0,0,0,0,0,0.242780379534093,0,0,0,0.126373159256976,0,0,0,0.661983911750998,0,0,0.284609546029793,0,0,0,0.522355239482415,0,0.859930162358083,0.0967563312890851,0.803982487948041,0.410577285266046,0,0,0,3.56309004081552,1.39100228192093,0,0.195551382734803,0.801588202515337,0,0.19980960958213,0.288180834308212,0,0,0.14405479798815,0.248505071130865,0.942776138467182,0.271808412147228,0.313808538937,0.305994652908965,2.02265412931063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393709926058995,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0.422401346077626,0,0.191915197319445,0,0,0,0,0,0,0,0.410462603746695,0,1.92630555584214,0,0,0,0,0.513260513652988,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,1.37478448758317,0.151649117541648,0,0.470531639396343,0,0,0,0,0,0,0.251567901752575,0,0.228840068396924,0,0.15543720058278,0.147855149989634,0,0.449803112163605,0.310525913752519,0,0,0,0,0.380805212168795,0,0.181848659202559,0,0,0,0.400027764663154,0,0,0,0.192619830407303,0.643324774124777,3.39292579554775,0.906823702049089,0.926089897295336,1.46842022703881,0,0,0,0.530067437837643,0.38582807654183,0.506827321959218,1.28120759293973,0,0,0,0,0,0,0.327609848846413,3.19504781379835,1.90180911022764,0,0.106691729694141,0.344429959321631,1.13503190713367,0,0.139879507719444,0,0,0,0,0,0.169732529954025,0,1.73510069962603,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,1.83428598521679,0.462102664601353,0,0,0.198916222116275,0,0.20170506870352,0,0.261906694481422,3.43921026771203,10.0542138627591,0,0,0,0,0,0,0,0,0.766574565837572,0,0,0,0,0,0,0.342976018874837,0,0,0.709163045303809,0.222462803784138,0,0,0.280272163313789,0,0.215927591218621,0,0,0,0.116241425368125,0.173858272302579,0,0.207216164163037,0,0,0,0.236664001461131,0.426067023795788,0,0,0,0,0.223710863595585,0.392600934460972,0.365753774946808,0,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| |||
|short_description=p@chr19:45091091..45091104,- | |||
}} |
Latest revision as of 14:40, 27 July 2015
Short description: | p@chr19:45091091..45091104, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:45091091..45091104, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 2.76e-09 | 13 |
epithelial cell of tracheobronchial tree | 4.81e-09 | 9 |
epithelial cell of lower respiratory tract | 4.81e-09 | 9 |
pneumocyte | 6.45e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.81e-11 | 2 |
alveolar duct | 1.81e-11 | 2 |
bronchiole | 1.81e-11 | 2 |
duct | 5.96e-09 | 19 |
pulmonary alveolus epithelium | 6.45e-08 | 3 |
alveolus | 6.45e-08 | 3 |
pulmonary lobule | 6.45e-08 | 3 |
lobule | 6.45e-08 | 3 |
alveolus of lung | 6.45e-08 | 3 |
alveolar system | 6.45e-08 | 3 |
pulmonary acinus | 6.45e-08 | 3 |
alveolar sac | 6.45e-08 | 3 |
alveolar wall | 6.45e-08 | 3 |
hepatopancreatic ampulla | 9.91e-07 | 1 |
extrahepatic bile duct | 9.91e-07 | 1 |
common bile duct | 9.91e-07 | 1 |
duodenal papilla | 9.91e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.81e-11 | 2 |
tubular adenocarcinoma | 2.11e-11 | 2 |
cancer | 1.37e-08 | 235 |
disease of cellular proliferation | 2.69e-08 | 239 |
bronchus cancer | 4.55e-07 | 7 |
bronchogenic carcinoma | 4.55e-07 | 7 |