FFCP PHASE1:Hg19::chr19:39627507..39627526,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:39627507..39627526,+ | |||
|coexpression_cluster_id=C495 | |coexpression_cluster_id=C495 | ||
|description=CAGE_peak_at_chr19:39627507..39627526,+ | |description=CAGE_peak_at_chr19:39627507..39627526,+ | ||
|id=chr19:39627507..39627526,+ | |id=chr19:39627507..39627526,+ | ||
|ontology_enrichment_celltype=CL:0000039!1.09e-14!7;CL:0000586!1.09e-14!7;CL:0000077!4.86e-11!19;CL:0002586!4.09e-07!3;CL:0002541!5.66e-07!3 | |ontology_enrichment_celltype=CL:0000039!1.09e-14!7;CL:0000586!1.09e-14!7;CL:0000077!4.86e-11!19;CL:0002586!4.09e-07!3;CL:0002541!5.66e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000077;2.69e-17;19!CL:0002097;1.82e-11;2!CL:0000174;4.52e-08;3!CL:0002541;7.26e-08;3!CL:0000632;7.26e-08;3!CL:0002586;7.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.69e-17,19;CL:0002097,1.82e-11,2;CL:0000174,4.52e-08,3;CL:0002586,6.34e-08,3;CL:0002541,6.78e-08,3;CL:0000632,7.76e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;9.50e-07;29 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.23e-11!115;UBERON:0000966!8.22e-09!5;UBERON:0005388!8.22e-09!5;UBERON:0001802!8.22e-09!5;UBERON:0001781!4.09e-07!3;UBERON:0001782!4.09e-07!3;UBERON:0005424!4.09e-07!3;UBERON:0000476!5.66e-07!3;UBERON:0000920!5.66e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!4.23e-11!115;UBERON:0000966!8.22e-09!5;UBERON:0005388!8.22e-09!5;UBERON:0001802!8.22e-09!5;UBERON:0001781!4.09e-07!3;UBERON:0001782!4.09e-07!3;UBERON:0005424!4.09e-07!3;UBERON:0000476!5.66e-07!3;UBERON:0000920!5.66e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;3.45e-21;1!UBERON:0006518;3.45e-21;1!UBERON:0008949;3.45e-21;1!UBERON:0000101;3.45e-21;1!UBERON:0002167;3.45e-21;1!UBERON:0002048;1.02e-08;22!UBERON:0000117;1.02e-08;22!UBERON:0000171;1.02e-08;22!UBERON:0000170;1.02e-08;22!UBERON:0002369;4.52e-08;3!UBERON:0001235;4.52e-08;3!UBERON:0006858;4.52e-08;3!UBERON:0001781;7.26e-08;3!UBERON:0003124;7.26e-08;3!UBERON:0001782;7.26e-08;3!UBERON:0000920;7.26e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,3.45e-21,1;UBERON:0006518,3.45e-21,1;UBERON:0008949,3.45e-21,1;UBERON:0000101,3.45e-21,1;UBERON:0002167,3.45e-21,1;UBERON:0002048,1.08e-08,22;UBERON:0000117,1.08e-08,22;UBERON:0000171,1.08e-08,22;UBERON:0000170,1.08e-08,22;UBERON:0005597,1.08e-08,22;UBERON:0000118,1.08e-08,22;UBERON:0002369,4.52e-08,3;UBERON:0001235,4.52e-08,3;UBERON:0006858,4.52e-08,3;UBERON:0001782,6.34e-08,3;UBERON:0005424,6.34e-08,3;UBERON:0000920,6.78e-08,3 | |||
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| ||
|short_description=p@chr19:39627507..39627526,+ | |short_description=p@chr19:39627507..39627526,+ | ||
}} | }} |
Latest revision as of 07:28, 26 July 2015
Short description: | p@chr19:39627507..39627526, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:39627507..39627526, + |
Coexpression cluster: | C495_mesothelioma_Preadipocyte_Smooth_Multipotent_Placental_Sertoli_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.69e-17 | 19 |
cortical cell of adrenal gland | 1.82e-11 | 2 |
steroid hormone secreting cell | 4.52e-08 | 3 |
retinal pigment epithelial cell | 6.34e-08 | 3 |
chorionic membrane mesenchymal stem cell | 6.78e-08 | 3 |
hepatic stellate cell | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 3.45e-21 | 1 |
right lung lobe | 3.45e-21 | 1 |
lower lobe of lung | 3.45e-21 | 1 |
lobe of lung | 3.45e-21 | 1 |
right lung | 3.45e-21 | 1 |
lung | 1.08e-08 | 22 |
respiratory tube | 1.08e-08 | 22 |
respiration organ | 1.08e-08 | 22 |
pair of lungs | 1.08e-08 | 22 |
lung primordium | 1.08e-08 | 22 |
lung bud | 1.08e-08 | 22 |
adrenal gland | 4.52e-08 | 3 |
adrenal cortex | 4.52e-08 | 3 |
adrenal/interrenal gland | 4.52e-08 | 3 |
pigmented layer of retina | 6.34e-08 | 3 |
presumptive retinal pigmented epithelium | 6.34e-08 | 3 |
egg chorion | 6.78e-08 | 3 |