FFCP PHASE1:Hg19::chr19:36245653..36245670,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:36245653..36245670,-
|short_description=p4@CU679244
|description=CAGE_peak_4_at_CU679244_5end
|association_with_transcript=-279bp_to_CU679244_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-279bp_to_CU679244_5end | |||
|cluster_id=chr19:36245653..36245670,- | |||
|coexpression_cluster_id=C339 | |||
|description=CAGE_peak_4_at_CU679244_5end | |||
|id=chr19:36245653..36245670,- | |||
|ontology_enrichment_celltype=CL:0000055!2.71e-14!180;CL:0000057!5.13e-12!75;CL:0000680!2.03e-10!57;CL:0000056!2.03e-10!57;CL:0000355!2.03e-10!57;CL:0000187!3.95e-10!54;CL:0000136!4.43e-10!15;CL:0000183!7.87e-10!59;CL:0000393!7.74e-09!60;CL:0000211!7.74e-09!60;CL:0002334!2.07e-07!12;CL:0000192!2.09e-07!42;CL:0000514!2.09e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.47e-11;13!CL:0002615;1.74e-08;3!CL:0002521;3.36e-08;3!CL:0000632;2.04e-07;3!CL:0000327;9.03e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,9.98e-15,15;CL:0002615,3.23e-08,3;CL:0002521,3.56e-08,3;CL:0000632,1.54e-07,3;CL:0000327,9.32e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.30e-08;3!DOID:127;1.30e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,9.20e-09,3;DOID:127,9.20e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0002385!2.42e-14!63;UBERON:0001015!2.42e-14!63;UBERON:0000383!2.42e-14!63;UBERON:0001134!3.13e-13!61;UBERON:0002036!3.13e-13!61;UBERON:0003082!3.13e-13!61;UBERON:0004290!5.36e-13!70;UBERON:0000914!4.99e-12!83;UBERON:0002329!4.99e-12!83;UBERON:0003077!4.99e-12!83;UBERON:0003059!4.99e-12!83;UBERON:0007282!4.99e-12!83;UBERON:0009618!4.99e-12!83;UBERON:0007285!4.99e-12!83;UBERON:0000486!7.20e-11!82;UBERON:0005256!1.19e-10!143;UBERON:0000475!4.13e-09!365;UBERON:0007023!1.04e-08!115;UBERON:0002100!1.66e-08!216;UBERON:0000468!4.47e-08!659;UBERON:0003688!3.94e-07!6;UBERON:0002358!3.94e-07!6;UBERON:0003684!3.94e-07!6;UBERON:0001178!3.94e-07!6;UBERON:0001135!3.99e-07!15;UBERON:0000481!9.34e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.34e-13;9!UBERON:0000042;2.34e-13;9!UBERON:0003688;4.42e-11;6!UBERON:0002358;4.42e-11;6!UBERON:0003684;4.42e-11;6!UBERON:0001178;4.42e-11;6!UBERON:0002190;3.36e-08;3!UBERON:0002072;4.38e-08;5!UBERON:0005090;9.58e-07;2!UBERON:0001630;9.58e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,7.12e-11,6;UBERON:0002358,7.12e-11,6;UBERON:0003684,7.12e-11,6;UBERON:0001178,7.12e-11,6;UBERON:0004457,1.30e-09,12;UBERON:0000042,1.30e-09,12;UBERON:0002190,3.56e-08,3;UBERON:0002072,6.26e-08,5;UBERON:0000926,2.31e-07,315;UBERON:0004120,2.31e-07,315;UBERON:0006603,2.31e-07,315;UBERON:0005090,9.52e-07,2;UBERON:0001630,9.52e-07,2 | |||
|phase1_expression=0.54503513781167,3.63970890614671,3.24195129420734,1.0007329835313,11.1740273606822,4.36169262050184,2.53299878168311,1.26343974685366,3.91778442299758,0,0,0,0.263766978228454,0.247532705920093,0,0,0.602694528023977,0.730310090387373,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,1.0843174571537,0,2.17269778441236,0,0,0,0.221729397462564,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,1.01304409331664,0.264818361626438,1.14734648299525,1.77334191099179,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0.490385709340376,0.151357427644931,0,0,0.624320153660641,0,1.64393548606981,0.117434498643765,0,0.140450806702248,0.204154171254893,0.245668634623536,0.619954687054593,0,0,0,0.718618141816238,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0.18611685633159,0,0.389748020644795,1.00973509697646,0.184099797284599,0.484938170456436,1.06502877754984,0.403008392910561,0.339121184620975,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,1.47008711385542,0,0.982827216677626,1.18157981336281,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0.1466765716419,0,0,0,0.797814349754612,2.08014873822732,0,0,0,3.0025378668211,1.08524321078289,0,0,1.42156779497018,0,0,0,0,0,0,0,0,2.29723871668228,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,2.00068208423871,0.271265023699736,0,0,0.315404830067869,0,0,0,0,0.664225598535437,0,0.521301686808497,0.195801157462741,0,0,0,0,0,1.66435439510497,0,2.48107807818777,0,0.841980283299221,4.61300937320523,0.511707249066704,5.46903331888265,0,0.462629081407967,1.06537035187876,0.574890092096664,2.59627214591811,0.929683027679674,0,0,0,0.229628896329213,0.910455840033585,2.75361271414791,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0.773365746336976,0.154048617114644,0.614014698904518,0.137836572484531,0.214840489736547,0.435050081742686,0.255679882248303,0.534192213880424,0,0,0,0,13.4805209296213,1.88887408098384,0.6970372701606,0.616067160352178,0.532306030317022,0,0.74129687641568,0,0,0,0.38126038784765,1.535386747868,0.42793898803392,0,0,0.539617372749944,1.64722217841633,0.235624804691373,0.404364963146632,0,0,0,0,1.05650146756755,0.545999645631943,2.40389234321312,0,0.551365343546124,0,1.75380354101505,0.578775534266688,1.9676842561399,0,0,0.281695602532241,0.143411352204052,0.392996164052485,0,0.354761064070598,2.32218398827431,1.64647446479951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.140669416410513,0,0,0,2.78947183551498,0.828851746593443,0,0,0,0,0,0,0,1.87422470710174,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,7.2231988256891,0.468528891450678,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01871336956669,0.51595809741485,0,0,0,0.387956065953678,0,1.58186518546373,0,0,0.0633107959558787,0,0,0.85381197895741,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,4.58320848023367,0,2.1964690054889,10.3014251552777,1.11585728720936,0.201550417460179,1.80149941771202,0,0,0,0,0,0,0,0.136203406111576,0,0,0.415440338029185,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,3.57347663186684,1.98627591109629,0,11.402991636828,1.72844298240254,7.184921922407,0,0,0.681552087141687,0.113312091520126,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0.828478110694391,0.496166021811951,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0.366078794705889,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0.74627401443437,0.934853239388898,0.554805861502613,0.757612021100357,0.754703705257725,0,1.14420034198462,0.756154618816195,0,0,0,0,0.310525913752519,1.65882483136342,0.265841714557995,0,0,0,0.406870733204662,0.363697318405119,0,0.928067519756987,0,0,1.37358282073117,1.34699795506368,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0.168942440653073,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,1.65695355226657,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0.705351887381368,0,0,0,0.159633859057151,0,0,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0.546974809018219,0,4.46590060550365,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0.913158720509496,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,16.1857209296974,1.64260490969995,5.799072156691,1.45713297917742,0,0,0,0,0,0,0.2315224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| |phase1_expression=0.54503513781167,3.63970890614671,3.24195129420734,1.0007329835313,11.1740273606822,4.36169262050184,2.53299878168311,1.26343974685366,3.91778442299758,0,0,0,0.263766978228454,0.247532705920093,0,0,0.602694528023977,0.730310090387373,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,1.0843174571537,0,2.17269778441236,0,0,0,0.221729397462564,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,1.01304409331664,0.264818361626438,1.14734648299525,1.77334191099179,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0.490385709340376,0.151357427644931,0,0,0.624320153660641,0,1.64393548606981,0.117434498643765,0,0.140450806702248,0.204154171254893,0.245668634623536,0.619954687054593,0,0,0,0.718618141816238,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0.18611685633159,0,0.389748020644795,1.00973509697646,0.184099797284599,0.484938170456436,1.06502877754984,0.403008392910561,0.339121184620975,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,1.47008711385542,0,0.982827216677626,1.18157981336281,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0.1466765716419,0,0,0,0.797814349754612,2.08014873822732,0,0,0,3.0025378668211,1.08524321078289,0,0,1.42156779497018,0,0,0,0,0,0,0,0,2.29723871668228,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,2.00068208423871,0.271265023699736,0,0,0.315404830067869,0,0,0,0,0.664225598535437,0,0.521301686808497,0.195801157462741,0,0,0,0,0,1.66435439510497,0,2.48107807818777,0,0.841980283299221,4.61300937320523,0.511707249066704,5.46903331888265,0,0.462629081407967,1.06537035187876,0.574890092096664,2.59627214591811,0.929683027679674,0,0,0,0.229628896329213,0.910455840033585,2.75361271414791,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0.773365746336976,0.154048617114644,0.614014698904518,0.137836572484531,0.214840489736547,0.435050081742686,0.255679882248303,0.534192213880424,0,0,0,0,13.4805209296213,1.88887408098384,0.6970372701606,0.616067160352178,0.532306030317022,0,0.74129687641568,0,0,0,0.38126038784765,1.535386747868,0.42793898803392,0,0,0.539617372749944,1.64722217841633,0.235624804691373,0.404364963146632,0,0,0,0,1.05650146756755,0.545999645631943,2.40389234321312,0,0.551365343546124,0,1.75380354101505,0.578775534266688,1.9676842561399,0,0,0.281695602532241,0.143411352204052,0.392996164052485,0,0.354761064070598,2.32218398827431,1.64647446479951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.140669416410513,0,0,0,2.78947183551498,0.828851746593443,0,0,0,0,0,0,0,1.87422470710174,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0,7.2231988256891,0.468528891450678,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01871336956669,0.51595809741485,0,0,0,0.387956065953678,0,1.58186518546373,0,0,0.0633107959558787,0,0,0.85381197895741,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,4.58320848023367,0,2.1964690054889,10.3014251552777,1.11585728720936,0.201550417460179,1.80149941771202,0,0,0,0,0,0,0,0.136203406111576,0,0,0.415440338029185,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,3.57347663186684,1.98627591109629,0,11.402991636828,1.72844298240254,7.184921922407,0,0,0.681552087141687,0.113312091520126,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0.828478110694391,0.496166021811951,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0.366078794705889,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0.74627401443437,0.934853239388898,0.554805861502613,0.757612021100357,0.754703705257725,0,1.14420034198462,0.756154618816195,0,0,0,0,0.310525913752519,1.65882483136342,0.265841714557995,0,0,0,0.406870733204662,0.363697318405119,0,0.928067519756987,0,0,1.37358282073117,1.34699795506368,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0.168942440653073,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,1.65695355226657,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0.705351887381368,0,0,0,0.159633859057151,0,0,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0.546974809018219,0,4.46590060550365,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0,0.913158720509496,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,16.1857209296974,1.64260490969995,5.799072156691,1.45713297917742,0,0,0,0,0,0,0.2315224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| ||
|short_description=p4@CU679244 | |||
}} | }} |
Latest revision as of 06:49, 26 July 2015
Short description: | p4@CU679244 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CU679244_5end |
Coexpression cluster: | C339_Mesenchymal_heart_leiomyoma_Adipocyte_Smooth_skeletal_tongue |
Association with transcript: | -279bp_to_CU679244_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 9.98e-15 | 15 |
adipocyte of omentum tissue | 3.23e-08 | 3 |
subcutaneous fat cell | 3.56e-08 | 3 |
hepatic stellate cell | 1.54e-07 | 3 |
extracellular matrix secreting cell | 9.32e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 7.12e-11 | 6 |
peritoneum | 7.12e-11 | 6 |
abdominal cavity | 7.12e-11 | 6 |
visceral peritoneum | 7.12e-11 | 6 |
cavity lining | 1.30e-09 | 12 |
serous membrane | 1.30e-09 | 12 |
subcutaneous adipose tissue | 3.56e-08 | 3 |
hypodermis | 6.26e-08 | 5 |
mesoderm | 2.31e-07 | 315 |
mesoderm-derived structure | 2.31e-07 | 315 |
presumptive mesoderm | 2.31e-07 | 315 |
muscle structure | 9.52e-07 | 2 |
muscle organ | 9.52e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 9.20e-09 | 3 |
leiomyoma | 9.20e-09 | 3 |