FFCP PHASE1:Hg19::chr19:29097635..29097640,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:29097635..29097640,+ | |||
|description=CAGE_peak_at_chr19:29097635..29097640,+ | |description=CAGE_peak_at_chr19:29097635..29097640,+ | ||
|id=chr19:29097635..29097640,+ | |id=chr19:29097635..29097640,+ | ||
|ontology_enrichment_celltype=CL:0002580!2.12e-11!3;CL:0000785!2.24e-08!2;CL:0000955!2.24e-08!2;CL:0000818!2.24e-08!2;CL:0000954!2.24e-08!2;CL:0000816!2.24e-08!2;CL:0002334!4.34e-07!12;CL:0002032!7.44e-07!165;CL:0000837!7.44e-07!165 | |ontology_enrichment_celltype=CL:0002580!2.12e-11!3;CL:0000785!2.24e-08!2;CL:0000955!2.24e-08!2;CL:0000818!2.24e-08!2;CL:0000954!2.24e-08!2;CL:0000816!2.24e-08!2;CL:0002334!4.34e-07!12;CL:0002032!7.44e-07!165;CL:0000837!7.44e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0002580;2.48e-09;3!CL:0000945;8.02e-09;24!CL:0000785;4.28e-08;1!CL:0000819;4.28e-08;1 | |ontology_enrichment_celltype_v019=CL:0002580;2.48e-09;3!CL:0000945;8.02e-09;24!CL:0000785;4.28e-08;1!CL:0000819;4.28e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002032,1.82e-14,161;CL:0000837,1.82e-14,161;CL:0000037,1.11e-13,168;CL:0000988,9.14e-13,177;CL:0000763,1.05e-11,108;CL:0000049,1.05e-11,108;CL:0002580,2.33e-09,3;CL:0000945,8.50e-09,24;CL:0000826,8.50e-09,24;CL:0000819,4.28e-08,1;CL:0000134,8.75e-08,354;CL:0002320,1.57e-07,361 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:8692!3.46e-27!31;DOID:2531!2.72e-24!51;DOID:0060083!2.72e-24!51;DOID:1240!9.24e-21!39;DOID:1036!5.38e-17!8;DOID:0050686!5.68e-16!137;DOID:162!1.29e-15!235;DOID:14566!4.32e-15!239 | |ontology_enrichment_disease=DOID:8692!3.46e-27!31;DOID:2531!2.72e-24!51;DOID:0060083!2.72e-24!51;DOID:1240!9.24e-21!39;DOID:1036!5.38e-17!8;DOID:0050686!5.68e-16!137;DOID:162!1.29e-15!235;DOID:14566!4.32e-15!239 | ||
|ontology_enrichment_disease_v019=DOID:8692;5.68e-42;31!DOID:1036;5.40e-29;8!DOID:1240;1.20e-25;39!DOID:2531;3.21e-22;51!DOID:0060083;3.21e-22;51!DOID:0060073;4.28e-08;1!DOID:8675;4.28e-08;1!DOID:8552;1.58e-07;1!DOID:2355;2.17e-07;1!DOID:3369;2.71e-07;1 | |ontology_enrichment_disease_v019=DOID:8692;5.68e-42;31!DOID:1036;5.40e-29;8!DOID:1240;1.20e-25;39!DOID:2531;3.21e-22;51!DOID:0060083;3.21e-22;51!DOID:0060073;4.28e-08;1!DOID:8675;4.28e-08;1!DOID:8552;1.58e-07;1!DOID:2355;2.17e-07;1!DOID:3369;2.71e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,2.11e-43,31;DOID:2531,3.70e-41,51;DOID:0060083,3.70e-41,51;DOID:1240,7.11e-34,39;DOID:1036,5.28e-29,8;DOID:0050686,1.17e-19,137;DOID:162,7.21e-12,235;DOID:14566,1.61e-11,239;DOID:0060073,4.28e-08,1;DOID:8675,4.28e-08,1;DOID:8552,1.58e-07,1;DOID:2355,2.17e-07,1;DOID:3369,2.31e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.38e-09!9 | |ontology_enrichment_uberon=UBERON:0001737!4.38e-09!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.39e-07;1!UBERON:0001282;2.71e-07;1!UBERON:0009842;2.71e-07;1!UBERON:0003704;2.71e-07;1!UBERON:0001171;2.71e-07;1!UBERON:0001172;2.71e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0007195;1.39e-07;1!UBERON:0001282;2.71e-07;1!UBERON:0009842;2.71e-07;1!UBERON:0003704;2.71e-07;1!UBERON:0001171;2.71e-07;1!UBERON:0001172;2.71e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.62e-09,371;UBERON:0007195,1.30e-07,1;UBERON:0001282,2.80e-07,1;UBERON:0009842,2.80e-07,1;UBERON:0003704,2.80e-07,1;UBERON:0001171,2.80e-07,1;UBERON:0001172,2.80e-07,1 | |||
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|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.265899271332,3.44822475689772,6.4542840677217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0.168584690078102,0,0.441175890929576,0.217879444092406,0,0,0.392442930250692,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,39.1328031884559,1.68396056659844,0.384417447767103,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.847046008296,0,0,0,30.1095949022289,20.5782019261023,25.3610695402101,0.19538809540204,7.79537286906679,0,11.0886828175153,0,1.4098700508785,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10776324914963,0,0.629078458031288,0,7.1620131831762,0,0,6.66821940867821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36730467016401,0,0,0,0,0,0,0,0,5.81740886650547,97.6829210472392,127.048522237895,138.45280925507,11.9544851616237,21.2975015833707,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,184.82670147547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.3834360336453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62487329403932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.2245396063533,0,0.113312091520126,0.293104467356165,0,0,0,0.342173675768659,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76872455576384,0,0,0,0,0,0,0,0,0,0,0,0,0,3.68211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.57658514560601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0,121.135378673647,0,0,0,0,0,0,0.828864656652147,0.17071847709395,0,0,0,0,0,0,1.24082554265728,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,4.69723432847166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:29097635..29097640,+ | |short_description=p@chr19:29097635..29097640,+ | ||
}} | }} |
Latest revision as of 06:01, 26 July 2015
Short description: | p@chr19:29097635..29097640, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:29097635..29097640, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 1.82e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.82e-14 | 161 |
hematopoietic stem cell | 1.11e-13 | 168 |
hematopoietic cell | 9.14e-13 | 177 |
myeloid cell | 1.05e-11 | 108 |
common myeloid progenitor | 1.05e-11 | 108 |
preadipocyte of the breast | 2.33e-09 | 3 |
lymphocyte of B lineage | 8.50e-09 | 24 |
pro-B cell | 8.50e-09 | 24 |
B-1 B cell | 4.28e-08 | 1 |
mesenchymal cell | 8.75e-08 | 354 |
connective tissue cell | 1.57e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.62e-09 | 371 |
stroma of bone marrow | 1.30e-07 | 1 |
intralobular bile duct | 2.80e-07 | 1 |
acinus | 2.80e-07 | 1 |
intrahepatic bile duct | 2.80e-07 | 1 |
portal lobule | 2.80e-07 | 1 |
hepatic acinus | 2.80e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.11e-43 | 31 |
hematologic cancer | 3.70e-41 | 51 |
immune system cancer | 3.70e-41 | 51 |
leukemia | 7.11e-34 | 39 |
chronic leukemia | 5.28e-29 | 8 |
organ system cancer | 1.17e-19 | 137 |
cancer | 7.21e-12 | 235 |
disease of cellular proliferation | 1.61e-11 | 239 |
lymphatic system cancer | 4.28e-08 | 1 |
lymphosarcoma | 4.28e-08 | 1 |
chronic myeloid leukemia | 1.58e-07 | 1 |
anemia | 2.17e-07 | 1 |
peripheral primitive neuroectodermal tumor | 2.31e-07 | 1 |