FFCP PHASE1:Hg19::chr19:18542701..18542716,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:18542701..18542716,+ | |||
|description=CAGE_peak_at_chr19:18542701..18542716,+ | |description=CAGE_peak_at_chr19:18542701..18542716,+ | ||
|id=chr19:18542701..18542716,+ | |id=chr19:18542701..18542716,+ | ||
|ontology_enrichment_celltype=CL:0002322!3.21e-24!5;CL:0002586!9.94e-15!3;CL:0000147!1.05e-11!14;CL:0000149!3.65e-11!4;CL:0000075!2.21e-07!27;CL:0000064!9.08e-07!3;CL:0005012!9.08e-07!3;CL:0000067!9.08e-07!3;CL:0002304!9.08e-07!3 | |ontology_enrichment_celltype=CL:0002322!3.21e-24!5;CL:0002586!9.94e-15!3;CL:0000147!1.05e-11!14;CL:0000149!3.65e-11!4;CL:0000075!2.21e-07!27;CL:0000064!9.08e-07!3;CL:0005012!9.08e-07!3;CL:0000067!9.08e-07!3;CL:0002304!9.08e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002322;3.19e-82;5!CL:0000147;2.07e-29;14!CL:0002321;1.28e-27;15!CL:0002586;1.12e-22;3!CL:0000149;2.82e-17;4!CL:0000148;1.36e-15;10!CL:0000710;4.25e-08;20!CL:0000214;5.80e-07;3 | |ontology_enrichment_celltype_v019=CL:0002322;3.19e-82;5!CL:0000147;2.07e-29;14!CL:0002321;1.28e-27;15!CL:0002586;1.12e-22;3!CL:0000149;2.82e-17;4!CL:0000148;1.36e-15;10!CL:0000710;4.25e-08;20!CL:0000214;5.80e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.48e-82,5;CL:0000147,2.48e-29,14;CL:0002586,1.12e-22,3;CL:0000149,2.82e-17,4;CL:0000148,1.57e-15,10;CL:0000541,1.57e-15,10;CL:0000710,4.57e-08,20;CL:0000214,5.80e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001781!9.94e-15!3;UBERON:0001782!9.94e-15!3;UBERON:0005424!9.94e-15!3;UBERON:0007625!2.99e-14!11;UBERON:0000007!2.55e-10!2;UBERON:0002346!2.97e-10!90;UBERON:0000369!3.41e-10!4;UBERON:0002435!3.41e-10!4;UBERON:0000204!3.41e-10!4;UBERON:0010082!3.41e-10!4;UBERON:0000966!5.12e-09!5;UBERON:0005388!5.12e-09!5;UBERON:0001802!5.12e-09!5;UBERON:0003075!4.14e-08!86;UBERON:0007284!4.14e-08!86;UBERON:0000019!5.44e-08!19;UBERON:0000047!5.44e-08!19;UBERON:0004088!5.44e-08!19;UBERON:0003072!5.44e-08!19;UBERON:0003071!5.44e-08!19;UBERON:0004128!5.44e-08!19;UBERON:0003056!7.92e-08!61;UBERON:0000970!1.47e-07!20;UBERON:0002104!3.60e-07!21;UBERON:0001456!3.60e-07!21;UBERON:0001778!9.08e-07!3;UBERON:0001775!9.08e-07!3 | |ontology_enrichment_uberon=UBERON:0001781!9.94e-15!3;UBERON:0001782!9.94e-15!3;UBERON:0005424!9.94e-15!3;UBERON:0007625!2.99e-14!11;UBERON:0000007!2.55e-10!2;UBERON:0002346!2.97e-10!90;UBERON:0000369!3.41e-10!4;UBERON:0002435!3.41e-10!4;UBERON:0000204!3.41e-10!4;UBERON:0010082!3.41e-10!4;UBERON:0000966!5.12e-09!5;UBERON:0005388!5.12e-09!5;UBERON:0001802!5.12e-09!5;UBERON:0003075!4.14e-08!86;UBERON:0007284!4.14e-08!86;UBERON:0000019!5.44e-08!19;UBERON:0000047!5.44e-08!19;UBERON:0004088!5.44e-08!19;UBERON:0003072!5.44e-08!19;UBERON:0003071!5.44e-08!19;UBERON:0004128!5.44e-08!19;UBERON:0003056!7.92e-08!61;UBERON:0000970!1.47e-07!20;UBERON:0002104!3.60e-07!21;UBERON:0001456!3.60e-07!21;UBERON:0001778!9.08e-07!3;UBERON:0001775!9.08e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001781;1.12e-22;3!UBERON:0001782;1.12e-22;3!UBERON:0000966;5.01e-14;5!UBERON:0005388;5.01e-14;5!UBERON:0001802;5.01e-14;5!UBERON:0000922;4.19e-07;49!UBERON:0006915;5.80e-07;3!UBERON:0007616;5.80e-07;3!UBERON:0002217;5.80e-07;3!UBERON:0002018;5.80e-07;3!UBERON:0007625;7.15e-07;11 | |ontology_enrichment_uberon_v019=UBERON:0001781;1.12e-22;3!UBERON:0001782;1.12e-22;3!UBERON:0000966;5.01e-14;5!UBERON:0005388;5.01e-14;5!UBERON:0001802;5.01e-14;5!UBERON:0000922;4.19e-07;49!UBERON:0006915;5.80e-07;3!UBERON:0007616;5.80e-07;3!UBERON:0002217;5.80e-07;3!UBERON:0002018;5.80e-07;3!UBERON:0007625;7.15e-07;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,1.12e-22,3;UBERON:0005424,1.12e-22,3;UBERON:0001781,2.82e-17,4;UBERON:0000966,7.48e-12,6;UBERON:0005388,7.48e-12,6;UBERON:0001802,7.48e-12,6;UBERON:0006915,5.80e-07,3;UBERON:0007616,5.80e-07,3;UBERON:0002217,5.80e-07,3;UBERON:0002018,5.80e-07,3;UBERON:0007625,7.15e-07,11 | |||
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| ||
|short_description=p@chr19:18542701..18542716,+ | |short_description=p@chr19:18542701..18542716,+ | ||
}} | }} |
Latest revision as of 05:12, 26 July 2015
Short description: | p@chr19:18542701..18542716, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:18542701..18542716, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.48e-82 | 5 |
pigment cell | 2.48e-29 | 14 |
retinal pigment epithelial cell | 1.12e-22 | 3 |
visual pigment cell | 2.82e-17 | 4 |
melanocyte | 1.57e-15 | 10 |
melanoblast | 1.57e-15 | 10 |
neurecto-epithelial cell | 4.57e-08 | 20 |
synovial cell | 5.80e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 1.12e-22 | 3 |
presumptive retinal pigmented epithelium | 1.12e-22 | 3 |
layer of retina | 2.82e-17 | 4 |
retina | 7.48e-12 | 6 |
photoreceptor array | 7.48e-12 | 6 |
posterior segment of eyeball | 7.48e-12 | 6 |
stratified squamous epithelium | 5.80e-07 | 3 |
layer of synovial tissue | 5.80e-07 | 3 |
synovial joint | 5.80e-07 | 3 |
synovial membrane of synovial joint | 5.80e-07 | 3 |
pigment epithelium of eye | 7.15e-07 | 11 |