FFCP PHASE1:Hg19::chr19:15757649..15757664,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:15757649..15757664,+ | |||
|coexpression_cluster_id=C74 | |||
|description=CAGE_peak_at_chr19:15757649..15757664,+ | |description=CAGE_peak_at_chr19:15757649..15757664,+ | ||
|id=chr19:15757649..15757664,+ | |id=chr19:15757649..15757664,+ | ||
|ontology_enrichment_celltype=CL:0002327!1.33e-07!4;CL:0000764!2.21e-07!2;CL:0000765!2.21e-07!2;CL:0000050!2.21e-07!2;CL:0000038!2.21e-07!2;CL:0000558!2.21e-07!2;CL:0000547!2.21e-07!2;CL:0000549!2.21e-07!2;CL:0000550!2.21e-07!2;CL:0000552!2.21e-07!2;CL:0000945!5.66e-07!24;CL:0000826!5.66e-07!24 | |ontology_enrichment_celltype=CL:0002327!1.33e-07!4;CL:0000764!2.21e-07!2;CL:0000765!2.21e-07!2;CL:0000050!2.21e-07!2;CL:0000038!2.21e-07!2;CL:0000558!2.21e-07!2;CL:0000547!2.21e-07!2;CL:0000549!2.21e-07!2;CL:0000550!2.21e-07!2;CL:0000552!2.21e-07!2;CL:0000945!5.66e-07!24;CL:0000826!5.66e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000764;3.52e-11;2!CL:0000558;3.52e-11;2!CL:0000945;4.41e-08;24!CL:0002623;7.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,4.52e-11,2;CL:0000765,4.52e-11,2;CL:0000050,4.52e-11,2;CL:0000038,4.52e-11,2;CL:0000558,4.52e-11,2;CL:0000547,4.52e-11,2;CL:0000549,4.52e-11,2;CL:0000550,4.52e-11,2;CL:0000552,4.52e-11,2;CL:0000945,4.52e-08,24;CL:0000826,4.52e-08,24;CL:0002623,5.93e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;5.71e-21;1!DOID:0050177;5.71e-21;1!DOID:0050427;5.71e-21;1!DOID:4556;7.02e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:630,5.16e-21,1;DOID:0050177,5.16e-21,1;DOID:0050427,5.16e-21,1;DOID:4556,6.34e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0001911!1.33e-07!4;UBERON:0005333!1.33e-07!4;UBERON:0008425!1.33e-07!4;UBERON:0005311!1.33e-07!4 | |ontology_enrichment_uberon=UBERON:0001911!1.33e-07!4;UBERON:0005333!1.33e-07!4;UBERON:0008425!1.33e-07!4;UBERON:0005311!1.33e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;4.52e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,4.52e-08,3;UBERON:0004854,4.52e-08,3;UBERON:0009034,4.52e-08,3;UBERON:0002095,4.52e-08,3;UBERON:0004782,4.52e-08,3;UBERON:0003281,4.52e-08,3;UBERON:0009664,4.52e-08,3;UBERON:0002296,4.52e-08,3;UBERON:0005602,4.52e-08,3;UBERON:0001179,4.52e-08,3;UBERON:0006293,4.52e-08,3 | |||
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| 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| ||
|short_description=p@chr19:15757649..15757664,+ | |short_description=p@chr19:15757649..15757664,+ | ||
}} | }} |
Latest revision as of 04:36, 26 July 2015
Short description: | p@chr19:15757649..15757664, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:15757649..15757664, + |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 4.52e-11 | 2 |
erythroblast | 4.52e-11 | 2 |
megakaryocyte-erythroid progenitor cell | 4.52e-11 | 2 |
erythroid progenitor cell | 4.52e-11 | 2 |
reticulocyte | 4.52e-11 | 2 |
proerythroblast | 4.52e-11 | 2 |
basophilic erythroblast | 4.52e-11 | 2 |
polychromatophilic erythroblast | 4.52e-11 | 2 |
orthochromatic erythroblast | 4.52e-11 | 2 |
lymphocyte of B lineage | 4.52e-08 | 24 |
pro-B cell | 4.52e-08 | 24 |
acinar cell of salivary gland | 5.93e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
spleen | 4.52e-08 | 3 |
gastrointestinal system mesentery | 4.52e-08 | 3 |
stomach region | 4.52e-08 | 3 |
mesentery | 4.52e-08 | 3 |
gastrointestinal system serosa | 4.52e-08 | 3 |
mesentery of stomach | 4.52e-08 | 3 |
gut mesentery | 4.52e-08 | 3 |
dorsal mesentery | 4.52e-08 | 3 |
dorsal mesogastrium | 4.52e-08 | 3 |
peritoneal cavity | 4.52e-08 | 3 |
spleen primordium | 4.52e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 5.16e-21 | 1 |
monogenic disease | 5.16e-21 | 1 |
xeroderma pigmentosum | 5.16e-21 | 1 |
lung large cell carcinoma | 6.34e-08 | 3 |