FFCP PHASE1:Hg19::chr19:1470631..1470648,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:1470631..1470648,- to FFCP PHASE1:Hg19::chr19:1470631..1470648,-: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:1470631..1470648,- | |||
|description=CAGE_peak_at_chr19:1470631..1470648,- | |||
|id=chr19:1470631..1470648,- | |||
|ontology_enrichment_celltype=CL:0002076!9.07e-15!43;CL:0002368!1.14e-13!13;CL:0000223!2.07e-09!59;CL:0002150!1.08e-08!3;CL:0000861!1.08e-08!3;CL:0000066!1.81e-08!254;CL:0002328!4.84e-08!3;CL:0002231!2.42e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000306;9.87e-34;4!CL:0002222;9.87e-34;4!CL:0002224;9.87e-34;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,8.36e-34,4;CL:0002222,8.36e-34,4;CL:0002224,8.36e-34,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.59e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004815!4.84e-08!3;UBERON:0002031!4.84e-08!3;UBERON:0001896!5.00e-07!3;UBERON:0005290!5.00e-07!3;UBERON:0010096!5.00e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;9.87e-34;4!UBERON:0005389;9.87e-34;4!UBERON:0000484;9.87e-34;4!UBERON:0000965;9.87e-34;4!UBERON:0001803;9.87e-34;4!UBERON:0000019;2.39e-16;19!UBERON:0000047;2.39e-16;19!UBERON:0004088;2.39e-16;19!UBERON:0010230;2.39e-16;19!UBERON:0000970;1.43e-15;20!UBERON:0002104;7.18e-15;21!UBERON:0001456;7.18e-15;21!UBERON:0000020;1.20e-13;23!UBERON:0001032;4.11e-13;24!UBERON:0004456;4.11e-13;24!UBERON:0007625;5.42e-13;11!UBERON:0001801;1.99e-10;14!UBERON:0000966;6.55e-08;5!UBERON:0005388;6.55e-08;5!UBERON:0001802;6.55e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,8.36e-34,4;UBERON:0005389,8.36e-34,4;UBERON:0000484,8.36e-34,4;UBERON:0002546,8.36e-34,4;UBERON:0000965,8.36e-34,4;UBERON:0001803,8.36e-34,4;UBERON:0003073,8.36e-34,4;UBERON:0005426,8.36e-34,4;UBERON:0000076,1.71e-17,8;UBERON:0000019,1.29e-15,20;UBERON:0000047,1.29e-15,20;UBERON:0010312,1.29e-15,20;UBERON:0004088,1.29e-15,20;UBERON:0010230,1.29e-15,20;UBERON:0003072,1.29e-15,20;UBERON:0004128,1.29e-15,20;UBERON:0003071,1.29e-15,20;UBERON:0000970,6.53e-15,21;UBERON:0002104,6.53e-15,21;UBERON:0001456,2.85e-14,22;UBERON:0000020,3.78e-13,24;UBERON:0001032,3.78e-13,24;UBERON:0004456,3.78e-13,24;UBERON:0007625,5.10e-13,11;UBERON:0001801,1.90e-10,14;UBERON:0005085,2.36e-10,31;UBERON:0000966,8.02e-07,6;UBERON:0005388,8.02e-07,6;UBERON:0001802,8.02e-07,6;UBERON:0001444,8.40e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0.977766799900771,0.473447805734733,0,0,0,0,0.270803863765016,0,0.390178042679635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.439001141634502,0,0,0.185176890317059,0,0,1.44331342025273,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0.40101294060657,0.0920809889358963,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.495854746082934,0.768760269460425,0.510450849978337,0.4046311234222,0.464845549297286,0.62962469366128,0.6970372701606,0,0.532306030317022,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0.251932747854276,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0.520855522170466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0.171986032471617,1.25783230675811,1.0232504392066,0.574808199372465,0,0,0.90392296312213,0,0,0,0,0,0,0.599428828746391,0.432271251462318,0,0,0.14405479798815,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,1.19730191562487,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0.0620964029413835,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471878893390961,0,0,0,0,0.596748666348824,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,1.35805433935647,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0.102662806856247,0,0,0,0.198950775161368,0,0,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.827054095813604,0.250707539292375,0.151557396436479,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0.977766799900771,0.473447805734733,0,0,0,0,0.270803863765016,0,0.390178042679635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.439001141634502,0,0,0.185176890317059,0,0,1.44331342025273,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0.40101294060657,0.0920809889358963,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.495854746082934,0.768760269460425,0.510450849978337,0.4046311234222,0.464845549297286,0.62962469366128,0.6970372701606,0,0.532306030317022,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0.251932747854276,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0.520855522170466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0.171986032471617,1.25783230675811,1.0232504392066,0.574808199372465,0,0,0.90392296312213,0,0,0,0,0,0,0.599428828746391,0.432271251462318,0,0,0.14405479798815,0.248505071130865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,1.19730191562487,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0.0620964029413835,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471878893390961,0,0,0,0,0.596748666348824,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,1.35805433935647,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0.102662806856247,0,0,0,0.198950775161368,0,0,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.827054095813604,0.250707539292375,0.151557396436479,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:1470631..1470648,- | |||
}} | }} |
Latest revision as of 04:26, 26 July 2015
Short description: | p@chr19:1470631..1470648, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:1470631..1470648, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 8.36e-34 | 4 |
vertebrate lens cell | 8.36e-34 | 4 |
lens epithelial cell | 8.36e-34 | 4 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 8.36e-34 | 4 |
transparent eye structure | 8.36e-34 | 4 |
simple cuboidal epithelium | 8.36e-34 | 4 |
cranial placode | 8.36e-34 | 4 |
lens of camera-type eye | 8.36e-34 | 4 |
epithelium of lens | 8.36e-34 | 4 |
lens placode | 8.36e-34 | 4 |
lens vesicle | 8.36e-34 | 4 |
external ectoderm | 1.71e-17 | 8 |
camera-type eye | 1.29e-15 | 20 |
simple eye | 1.29e-15 | 20 |
immature eye | 1.29e-15 | 20 |
ocular region | 1.29e-15 | 20 |
eyeball of camera-type eye | 1.29e-15 | 20 |
optic cup | 1.29e-15 | 20 |
optic vesicle | 1.29e-15 | 20 |
eye primordium | 1.29e-15 | 20 |
eye | 6.53e-15 | 21 |
visual system | 6.53e-15 | 21 |
face | 2.85e-14 | 22 |
sense organ | 3.78e-13 | 24 |
sensory system | 3.78e-13 | 24 |
entire sense organ system | 3.78e-13 | 24 |
pigment epithelium of eye | 5.10e-13 | 11 |
anterior segment of eyeball | 1.90e-10 | 14 |
ectodermal placode | 2.36e-10 | 31 |
retina | 8.02e-07 | 6 |
photoreceptor array | 8.02e-07 | 6 |
posterior segment of eyeball | 8.02e-07 | 6 |
subdivision of head | 8.40e-07 | 49 |