FFCP PHASE1:Hg19::chr19:14074098..14074127,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-112bp_to_BC085614_5end | |association_with_transcript=-112bp_to_BC085614_5end | ||
|cluster_id=chr19:14074098..14074127,- | |||
|description=CAGE_peak_1_at_BC085614_5end | |description=CAGE_peak_1_at_BC085614_5end | ||
|id=chr19:14074098..14074127,- | |id=chr19:14074098..14074127,- | ||
|ontology_enrichment_celltype=CL:0000393!1.20e-10!60;CL:0000211!1.20e-10!60;CL:0000047!1.41e-10!8;CL:0000055!7.07e-10!180;CL:0002319!1.31e-09!25;CL:0000540!6.14e-08!6;CL:0000031!6.14e-08!6;CL:0000404!6.14e-08!6;CL:0000183!6.32e-08!59;CL:0000128!1.92e-07!7;CL:0000126!1.92e-07!7;CL:0000127!1.92e-07!7;CL:0002453!1.92e-07!7;CL:0000187!6.54e-07!54 | |ontology_enrichment_celltype=CL:0000393!1.20e-10!60;CL:0000211!1.20e-10!60;CL:0000047!1.41e-10!8;CL:0000055!7.07e-10!180;CL:0002319!1.31e-09!25;CL:0000540!6.14e-08!6;CL:0000031!6.14e-08!6;CL:0000404!6.14e-08!6;CL:0000183!6.32e-08!59;CL:0000128!1.92e-07!7;CL:0000126!1.92e-07!7;CL:0000127!1.92e-07!7;CL:0002453!1.92e-07!7;CL:0000187!6.54e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0002319;9.62e-16;25!CL:0000128;1.21e-14;7!CL:0000126;1.21e-14;7!CL:0000127;1.21e-14;7!CL:0002603;2.02e-10;3!CL:0000064;2.19e-09;3!CL:0000067;2.19e-09;3!CL:0005012;2.19e-09;3!CL:0002304;2.19e-09;3!CL:0002605;1.51e-08;3!CL:0000540;4.15e-08;6!CL:0000404;4.15e-08;6!CL:0000243;1.34e-07;15!CL:0000125;1.34e-07;15!CL:0000047;2.04e-07;2!CL:0002602;6.34e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.83e-16,25;CL:0000128,6.59e-15,7;CL:0000126,6.59e-15,7;CL:0000127,6.59e-15,7;CL:0002453,6.59e-15,7;CL:0000047,1.80e-13,8;CL:0002603,2.09e-10,3;CL:0000064,1.52e-09,3;CL:0000067,1.52e-09,3;CL:0005012,1.52e-09,3;CL:0002304,1.52e-09,3;CL:0002605,7.35e-09,3;CL:0000133,1.17e-08,59;CL:0000540,2.72e-08,6;CL:0000031,2.72e-08,6;CL:0000404,2.72e-08,6;CL:0000243,1.02e-07,15;CL:0000125,1.02e-07,15;CL:0000030,1.02e-07,15;CL:0000339,1.02e-07,15;CL:0002602,4.35e-07,2;CL:0000095,8.71e-07,17;CL:0000123,8.71e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000031;4.15e-08;6!CL:0000339;1.34e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!3.80e-10!347;UBERON:0000922!8.67e-09!612;UBERON:0000468!4.44e-08!659;UBERON:0002385!8.15e-08!63;UBERON:0001015!8.15e-08!63;UBERON:0000383!8.15e-08!63;UBERON:0002203!1.55e-07!6;UBERON:0001768!1.55e-07!6;UBERON:0007023!2.13e-07!115;UBERON:0004121!6.39e-07!169;UBERON:0001134!7.34e-07!61;UBERON:0002036!7.34e-07!61;UBERON:0003082!7.34e-07!61;UBERON:0005743!8.08e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;1.78e-09;5!UBERON:0002216;1.78e-09;5!UBERON:0011134;1.78e-09;5!UBERON:0002209;1.78e-09;5!UBERON:0002213;1.78e-09;5!UBERON:0007844;1.78e-09;5!UBERON:0011138;1.78e-09;5!UBERON:0001130;1.78e-09;5!UBERON:0001066;1.78e-09;5!UBERON:0001468;1.78e-09;5!UBERON:0001778;2.19e-09;3!UBERON:0001775;2.19e-09;3!UBERON:0004905;1.09e-08;8!UBERON:0000982;1.09e-08;8!UBERON:0004770;1.09e-08;8!UBERON:0002037;1.98e-08;6!UBERON:0000488;3.98e-07;4!UBERON:0006444;6.34e-07;2!UBERON:0001995;6.34e-07;2!UBERON:0004715;6.34e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.52e-09,3;UBERON:0001775,1.52e-09,3;UBERON:0011135,1.60e-09,5;UBERON:0002216,1.60e-09,5;UBERON:0011134,1.60e-09,5;UBERON:0002209,1.60e-09,5;UBERON:0002213,1.60e-09,5;UBERON:0005856,1.60e-09,5;UBERON:0005866,1.60e-09,5;UBERON:0005863,1.60e-09,5;UBERON:0007844,1.60e-09,5;UBERON:0011138,1.60e-09,5;UBERON:0001130,1.60e-09,5;UBERON:0001066,1.60e-09,5;UBERON:0001468,1.60e-09,5;UBERON:0004905,1.16e-08,8;UBERON:0000982,1.16e-08,8;UBERON:0004770,1.16e-08,8;UBERON:0002037,1.93e-08,6;UBERON:0006215,1.93e-08,6;UBERON:0000488,3.04e-07,4;UBERON:0006444,4.35e-07,2;UBERON:0001995,4.35e-07,2;UBERON:0004715,4.35e-07,2;UBERON:0001017,5.93e-07,81 | |||
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| ||
|short_description=p1@BC085614 | |short_description=p1@BC085614 | ||
}} | }} |
Latest revision as of 04:15, 26 July 2015
Short description: | p1@BC085614 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC085614_5end |
Coexpression cluster: | NA |
Association with transcript: | -112bp_to_BC085614_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.83e-16 | 25 |
oligodendrocyte | 6.59e-15 | 7 |
macroglial cell | 6.59e-15 | 7 |
astrocyte | 6.59e-15 | 7 |
oligodendrocyte precursor cell | 6.59e-15 | 7 |
neuronal stem cell | 1.80e-13 | 8 |
astrocyte of the cerebellum | 2.09e-10 | 3 |
ciliated cell | 1.52e-09 | 3 |
ciliated epithelial cell | 1.52e-09 | 3 |
multi-ciliated epithelial cell | 1.52e-09 | 3 |
non-pigmented ciliary epithelial cell | 1.52e-09 | 3 |
astrocyte of the cerebral cortex | 7.35e-09 | 3 |
neurectodermal cell | 1.17e-08 | 59 |
neuron | 2.72e-08 | 6 |
neuroblast | 2.72e-08 | 6 |
electrically signaling cell | 2.72e-08 | 6 |
glial cell (sensu Vertebrata) | 1.02e-07 | 15 |
glial cell | 1.02e-07 | 15 |
glioblast | 1.02e-07 | 15 |
glioblast (sensu Vertebrata) | 1.02e-07 | 15 |
annulus pulposus cell | 4.35e-07 | 2 |
neuron associated cell | 8.71e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 8.71e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 1.52e-09 | 3 |
ciliary body | 1.52e-09 | 3 |
intervertebral cartilage | 1.60e-09 | 5 |
symphysis | 1.60e-09 | 5 |
nonsynovial joint | 1.60e-09 | 5 |
fibrous joint | 1.60e-09 | 5 |
cartilaginous joint | 1.60e-09 | 5 |
developing mesenchymal condensation | 1.60e-09 | 5 |
pre-cartilage condensation | 1.60e-09 | 5 |
cartilaginous condensation | 1.60e-09 | 5 |
cartilage element | 1.60e-09 | 5 |
post-cranial axial skeletal system | 1.60e-09 | 5 |
vertebral column | 1.60e-09 | 5 |
intervertebral disk | 1.60e-09 | 5 |
intervertebral joint | 1.60e-09 | 5 |
articulation | 1.16e-08 | 8 |
skeletal joint | 1.16e-08 | 8 |
articular system | 1.16e-08 | 8 |
cerebellum | 1.93e-08 | 6 |
rhombic lip | 1.93e-08 | 6 |
atypical epithelium | 3.04e-07 | 4 |
annulus fibrosus | 4.35e-07 | 2 |
fibrocartilage | 4.35e-07 | 2 |
annulus fibrosus disci intervertebralis | 4.35e-07 | 2 |
central nervous system | 5.93e-07 | 81 |