FFCP PHASE1:Hg19::chr19:11257137..11257140,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:11257137..11257140,- | |||
|coexpression_cluster_id=C3746 | |coexpression_cluster_id=C3746 | ||
|description=CAGE_peak_at_chr19:11257137..11257140,- | |description=CAGE_peak_at_chr19:11257137..11257140,- | ||
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|ontology_enrichment_celltype=CL:0000548!6.15e-19!679;CL:0000004!6.15e-19!679;CL:0000255!6.15e-19!679;CL:0000012!1.09e-18!682;CL:0000066!1.03e-15!254;CL:0002321!3.27e-13!248;CL:0000220!5.23e-13!246;CL:0000003!3.64e-11!722;CL:0000055!1.98e-10!180;CL:0000144!6.24e-09!625;CL:0000333!8.62e-08!41;CL:0000222!9.67e-08!119;CL:0000133!4.59e-07!59 | |ontology_enrichment_celltype=CL:0000548!6.15e-19!679;CL:0000004!6.15e-19!679;CL:0000255!6.15e-19!679;CL:0000012!1.09e-18!682;CL:0000066!1.03e-15!254;CL:0002321!3.27e-13!248;CL:0000220!5.23e-13!246;CL:0000003!3.64e-11!722;CL:0000055!1.98e-10!180;CL:0000144!6.24e-09!625;CL:0000333!8.62e-08!41;CL:0000222!9.67e-08!119;CL:0000133!4.59e-07!59 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.22e-14,253;CL:0002321,1.41e-11,250;CL:0000333,5.59e-08,41;CL:0000222,3.28e-07,121;CL:0000133,3.47e-07,59 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!2.01e-31!235;DOID:14566!2.26e-30!239;DOID:0050686!2.12e-17!137;DOID:2531!1.03e-16!51;DOID:0060083!1.03e-16!51;DOID:1240!2.76e-13!39;DOID:0050687!7.02e-13!143;DOID:8692!4.34e-10!31;DOID:305!1.78e-09!106 | |ontology_enrichment_disease=DOID:162!2.01e-31!235;DOID:14566!2.26e-30!239;DOID:0050686!2.12e-17!137;DOID:2531!1.03e-16!51;DOID:0060083!1.03e-16!51;DOID:1240!2.76e-13!39;DOID:0050687!7.02e-13!143;DOID:8692!4.34e-10!31;DOID:305!1.78e-09!106 | ||
|ontology_enrichment_disease_v019=DOID:2531;2.98e-11;51!DOID:0060083;2.98e-11;51!DOID:1240;3.71e-11;39!DOID:8692;2.46e-10;31 | |ontology_enrichment_disease_v019=DOID:2531;2.98e-11;51!DOID:0060083;2.98e-11;51!DOID:1240;3.71e-11;39!DOID:8692;2.46e-10;31 | ||
|ontology_enrichment_disease_v019_2=DOID:162,2.33e-30,235;DOID:14566,1.97e-29,239;DOID:2531,1.72e-17,51;DOID:0060083,1.72e-17,51;DOID:0050686,6.15e-17,137;DOID:1240,6.33e-14,39;DOID:0050687,9.61e-12,143;DOID:8692,1.37e-10,31;DOID:305,5.46e-09,106 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr19:11257137..11257140,- | |short_description=p@chr19:11257137..11257140,- | ||
}} | }} |
Latest revision as of 03:23, 26 July 2015
Short description: | p@chr19:11257137..11257140, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:11257137..11257140, - |
Coexpression cluster: | C3746_acute_Reticulocytes_Renal_Alveolar_Hodgkin_mesenchymal_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.22e-14 | 253 |
embryonic cell | 1.41e-11 | 250 |
migratory neural crest cell | 5.59e-08 | 41 |
mesodermal cell | 3.28e-07 | 121 |
neurectodermal cell | 3.47e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.33e-30 | 235 |
disease of cellular proliferation | 1.97e-29 | 239 |
hematologic cancer | 1.72e-17 | 51 |
immune system cancer | 1.72e-17 | 51 |
organ system cancer | 6.15e-17 | 137 |
leukemia | 6.33e-14 | 39 |
cell type cancer | 9.61e-12 | 143 |
myeloid leukemia | 1.37e-10 | 31 |
carcinoma | 5.46e-09 | 106 |