FFCP PHASE1:Hg19::chr18:22251659..22251675,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:22251659..22251675,- | |||
|coexpression_cluster_id=C38 | |coexpression_cluster_id=C38 | ||
|description=CAGE_peak_at_chr18:22251659..22251675,- | |description=CAGE_peak_at_chr18:22251659..22251675,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:1000487!3.28e-07!2 | |ontology_enrichment_celltype=CL:1000487!3.28e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002563;1.03e-17;4!CL:0000138;2.19e-12;6!CL:0000153;1.04e-08;9!CL:0000447;1.04e-08;9 | |ontology_enrichment_celltype_v019=CL:0002563;1.03e-17;4!CL:0000138;2.19e-12;6!CL:0000153;1.04e-08;9!CL:0000447;1.04e-08;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.03e-17,4;CL:0000058,2.19e-12,6;CL:0000138,2.19e-12,6;CL:0000153,1.04e-08,9;CL:0000447,1.04e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0003918;6.13e-08;10!UBERON:0007687;6.13e-08;10 | |ontology_enrichment_development_v019=UBERON:0003918;6.13e-08;10!UBERON:0007687;6.13e-08;10 | ||
|ontology_enrichment_disease=DOID:3371!1.61e-13!1;DOID:4549!1.61e-13!1;DOID:5861!1.61e-13!1;DOID:6496!1.61e-13!1;DOID:154!4.42e-07!2;DOID:4236!4.42e-07!2 | |ontology_enrichment_disease=DOID:3371!1.61e-13!1;DOID:4549!1.61e-13!1;DOID:5861!1.61e-13!1;DOID:6496!1.61e-13!1;DOID:154!4.42e-07!2;DOID:4236!4.42e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:3371;1.23e-66;1!DOID:4549;1.23e-66;1!DOID:5861;1.23e-66;1!DOID:6496;1.23e-66;1!DOID:201;2.19e-12;6!DOID:0060100;2.19e-12;6 | |ontology_enrichment_disease_v019=DOID:3371;1.23e-66;1!DOID:4549;1.23e-66;1!DOID:5861;1.23e-66;1!DOID:6496;1.23e-66;1!DOID:201;2.19e-12;6!DOID:0060100;2.19e-12;6 | ||
|ontology_enrichment_disease_v019_2=DOID:3371,1.23e-66,1;DOID:4549,1.23e-66,1;DOID:5861,1.23e-66,1;DOID:6496,1.23e-66,1;DOID:201,2.19e-12,6;DOID:0060100,2.19e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0000989!2.95e-13!1;UBERON:0008811!2.95e-13!1;UBERON:0006258!2.95e-13!1;UBERON:0005876!2.95e-13!1;UBERON:0004874!2.95e-13!1;UBERON:0002363!1.09e-12!1;UBERON:0007647!1.09e-12!1;UBERON:0010115!1.09e-12!1;UBERON:0000162!4.94e-08!14;UBERON:0001353!4.94e-08!14;UBERON:0000163!4.94e-08!14;UBERON:0006866!4.94e-08!14;UBERON:0000164!4.94e-08!14;UBERON:0000931!4.94e-08!14;UBERON:0004122!1.57e-07!15;UBERON:0001255!4.17e-07!2;UBERON:0001556!4.17e-07!2;UBERON:0000160!5.43e-07!27;UBERON:0002360!5.60e-07!2;UBERON:0000094!5.60e-07!2;UBERON:0007645!5.60e-07!2 | |ontology_enrichment_uberon=UBERON:0000989!2.95e-13!1;UBERON:0008811!2.95e-13!1;UBERON:0006258!2.95e-13!1;UBERON:0005876!2.95e-13!1;UBERON:0004874!2.95e-13!1;UBERON:0002363!1.09e-12!1;UBERON:0007647!1.09e-12!1;UBERON:0010115!1.09e-12!1;UBERON:0000162!4.94e-08!14;UBERON:0001353!4.94e-08!14;UBERON:0000163!4.94e-08!14;UBERON:0006866!4.94e-08!14;UBERON:0000164!4.94e-08!14;UBERON:0000931!4.94e-08!14;UBERON:0004122!1.57e-07!15;UBERON:0001255!4.17e-07!2;UBERON:0001556!4.17e-07!2;UBERON:0000160!5.43e-07!27;UBERON:0002360!5.60e-07!2;UBERON:0000094!5.60e-07!2;UBERON:0007645!5.60e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002418;2.62e-23;3!UBERON:0004755;2.62e-23;3!UBERON:0001242;1.03e-17;4!UBERON:0001262;1.03e-17;4!UBERON:0004786;1.03e-17;4!UBERON:0004808;1.03e-17;4!UBERON:0001277;1.03e-17;4!UBERON:0000485;9.89e-11;7!UBERON:0003929;9.89e-11;7!UBERON:0003350;1.47e-09;8 | |ontology_enrichment_uberon_v019=UBERON:0002418;2.62e-23;3!UBERON:0004755;2.62e-23;3!UBERON:0001242;1.03e-17;4!UBERON:0001262;1.03e-17;4!UBERON:0004786;1.03e-17;4!UBERON:0004808;1.03e-17;4!UBERON:0001277;1.03e-17;4!UBERON:0000485;9.89e-11;7!UBERON:0003929;9.89e-11;7!UBERON:0003350;1.47e-09;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,2.62e-23,3;UBERON:0004755,2.62e-23,3;UBERON:0001242,1.03e-17,4;UBERON:0001262,1.03e-17,4;UBERON:0004786,1.03e-17,4;UBERON:0004808,1.03e-17,4;UBERON:0001277,1.03e-17,4;UBERON:0003350,1.47e-09,8;UBERON:0000485,1.21e-08,9 | |||
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|short_description=p@chr18:22251659..22251675,- | |short_description=p@chr18:22251659..22251675,- | ||
}} | }} |
Latest revision as of 00:05, 26 July 2015
Short description: | p@chr18:22251659..22251675, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:22251659..22251675, - |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.03e-17 | 4 |
chondroblast | 2.19e-12 | 6 |
chondrocyte | 2.19e-12 | 6 |
GAG secreting cell | 1.04e-08 | 9 |
carbohydrate secreting cell | 1.04e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 2.62e-23 | 3 |
skeletal tissue | 2.62e-23 | 3 |
intestinal mucosa | 1.03e-17 | 4 |
wall of intestine | 1.03e-17 | 4 |
gastrointestinal system mucosa | 1.03e-17 | 4 |
gastrointestinal system epithelium | 1.03e-17 | 4 |
intestinal epithelium | 1.03e-17 | 4 |
epithelium of mucosa | 1.47e-09 | 8 |
simple columnar epithelium | 1.21e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.23e-66 | 1 |
extraosseous chondrosarcoma | 1.23e-66 | 1 |
myxoid chondrosarcoma | 1.23e-66 | 1 |
extraskeletal myxoid chondrosarcoma | 1.23e-66 | 1 |
connective tissue cancer | 2.19e-12 | 6 |
musculoskeletal system cancer | 2.19e-12 | 6 |