FFCP PHASE1:Hg19::chr18:20494064..20494069,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr18:20494064..20494069,+ to FFCP PHASE1:Hg19::chr18:20494064..20494069,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:20494064..20494069,+ | |||
|coexpression_cluster_id=C1796 | |||
|description=CAGE_peak_at_chr18:20494064..20494069,+ | |||
|id=chr18:20494064..20494069,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.68e-15!43;CL:0002159!9.84e-14!13;CL:0002166!2.68e-10!3;CL:0000223!4.11e-10!59;CL:0002621!8.98e-10!3;CL:0000066!3.13e-09!254;CL:0002368!8.29e-08!13;CL:0002251!1.23e-07!21;CL:0002327!1.47e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002166;8.48e-29;3!CL:0002076;1.82e-20;42!CL:0002368;2.93e-17;13!CL:0002159;1.65e-16;14!CL:0002621;4.15e-13;3!CL:0002231;6.55e-13;3!CL:0002336;9.82e-11;1!CL:0002261;9.82e-11;1!CL:0002170;9.82e-11;1!CL:0002327;3.45e-10;4!CL:0002251;1.66e-07;20!CL:0000240;3.65e-07;6!CL:0000311;3.65e-07;6!CL:0000079;3.65e-07;6!CL:0000237;3.65e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,1.07e-28,3;CL:0002076,2.99e-24,42;CL:0002368,2.74e-17,13;CL:0000223,4.23e-17,58;CL:0002159,1.94e-16,14;CL:0002621,4.29e-13,3;CL:0002231,8.87e-13,3;CL:0002336,8.95e-11,1;CL:0002261,8.95e-11,1;CL:0002170,8.95e-11,1;CL:0002327,3.01e-10,4;CL:0000066,5.04e-10,253;CL:0002251,1.58e-07,20;CL:0000240,3.34e-07,6;CL:0000311,3.34e-07,6;CL:0000079,3.34e-07,6;CL:0000237,3.34e-07,6;CL:0000036,3.34e-07,6;CL:0000357,3.34e-07,6;CL:0000114,3.34e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000223;1.10e-08;58!CL:0000357;3.65e-07;6!CL:0000114;3.65e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!7.32e-11!169;UBERON:0000925!7.32e-11!169;UBERON:0006595!7.32e-11!169;UBERON:0001949!8.98e-10!3;UBERON:0006947!3.43e-09!3;UBERON:0004054!3.43e-09!3;UBERON:0001004!2.66e-08!72;UBERON:0001007!4.34e-08!155;UBERON:0001555!4.34e-08!155;UBERON:0007026!4.34e-08!155;UBERON:0001708!8.54e-08!4;UBERON:0001704!8.54e-08!4;UBERON:0000161!1.18e-07!35;UBERON:0001911!1.47e-07!4;UBERON:0005333!1.47e-07!4;UBERON:0008425!1.47e-07!4;UBERON:0005311!1.47e-07!4;UBERON:0005904!5.58e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;9.07e-22;4!UBERON:0008895;9.07e-22;4!UBERON:0011159;1.53e-17;5!UBERON:0001949;4.15e-13;3!UBERON:0003729;1.83e-11;13!UBERON:0001301;2.62e-10;1!UBERON:0001911;3.45e-10;4!UBERON:0011137;2.94e-08;11!UBERON:0010323;2.94e-08;11!UBERON:0000344;1.66e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,1.08e-21,4;UBERON:0008895,1.08e-21,4;UBERON:0011159,1.76e-17,5;UBERON:0010188,1.15e-14,6;UBERON:0002539,1.15e-14,6;UBERON:0008816,1.15e-14,6;UBERON:0001949,4.29e-13,3;UBERON:0003729,1.69e-11,13;UBERON:0001911,3.01e-10,4;UBERON:0005333,3.01e-10,4;UBERON:0008425,3.01e-10,4;UBERON:0005311,3.01e-10,4;UBERON:0001301,4.33e-10,1;UBERON:0003102,2.02e-09,99;UBERON:0010323,3.13e-08,11;UBERON:0000344,1.58e-07,20;UBERON:0000033,2.38e-07,56;UBERON:0001004,7.96e-07,74 | |||
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| 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| ||
|short_description=p@chr18:20494064..20494069,+ | |||
}} | }} |
Latest revision as of 23:55, 25 July 2015
Short description: | p@chr18:20494064..20494069, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:20494064..20494069, + |
Coexpression cluster: | C1796_Keratinocyte_Small_Mallassezderived_cervical_Mammary_oral_malignant |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 1.07e-28 | 3 |
endo-epithelial cell | 2.99e-24 | 42 |
respiratory epithelial cell | 2.74e-17 | 13 |
endodermal cell | 4.23e-17 | 58 |
general ecto-epithelial cell | 1.94e-16 | 14 |
gingival epithelial cell | 4.29e-13 | 3 |
epithelial cell of prostate | 8.87e-13 | 3 |
buccal mucosa cell | 8.95e-11 | 1 |
endothelial cell of viscerocranial mucosa | 8.95e-11 | 1 |
keratinized cell of the oral mucosa | 8.95e-11 | 1 |
mammary gland epithelial cell | 3.01e-10 | 4 |
epithelial cell | 5.04e-10 | 253 |
epithelial cell of alimentary canal | 1.58e-07 | 20 |
stratified squamous epithelial cell | 3.34e-07 | 6 |
keratin accumulating cell | 3.34e-07 | 6 |
stratified epithelial cell | 3.34e-07 | 6 |
keratinizing barrier epithelial cell | 3.34e-07 | 6 |
epithelial fate stem cell | 3.34e-07 | 6 |
stratified epithelial stem cell | 3.34e-07 | 6 |
surface ectodermal cell | 3.34e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 1.08e-21 | 4 |
splanchnocranium | 1.08e-21 | 4 |
primary subdivision of cranial skeletal system | 1.76e-17 | 5 |
protuberance | 1.15e-14 | 6 |
pharyngeal arch | 1.15e-14 | 6 |
embryonic head | 1.15e-14 | 6 |
gingival epithelium | 4.29e-13 | 3 |
mouth mucosa | 1.69e-11 | 13 |
mammary gland | 3.01e-10 | 4 |
mammary bud | 3.01e-10 | 4 |
mammary ridge | 3.01e-10 | 4 |
mammary placode | 3.01e-10 | 4 |
epididymis | 4.33e-10 | 1 |
surface structure | 2.02e-09 | 99 |
cranial skeletal system | 3.13e-08 | 11 |
mucosa | 1.58e-07 | 20 |
head | 2.38e-07 | 56 |
respiratory system | 7.96e-07 | 74 |