FFCP PHASE1:Hg19::chr17:80594899..80594906,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:80594899..80594906,+ | |||
|coexpression_cluster_id=C146 | |||
|description=CAGE_peak_at_chr17:80594899..80594906,+ | |description=CAGE_peak_at_chr17:80594899..80594906,+ | ||
|id=chr17:80594899..80594906,+ | |id=chr17:80594899..80594906,+ | ||
|ontology_enrichment_celltype=CL:0000167!2.71e-08!1;CL:0000164!2.71e-08!1;CL:0000502!2.71e-08!1;CL:0000172!2.71e-08!1;CL:0000173!2.71e-08!1;CL:0002351!2.71e-08!1 | |ontology_enrichment_celltype=CL:0000167!2.71e-08!1;CL:0000164!2.71e-08!1;CL:0000502!2.71e-08!1;CL:0000172!2.71e-08!1;CL:0000173!2.71e-08!1;CL:0002351!2.71e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000322;3.66e-23;3!CL:0002202;1.16e-08;9!CL:0002632;1.16e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,3.27e-23,3;CL:0002202,1.12e-08,9;CL:0002632,1.12e-08,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4430!2.71e-08!1;DOID:0050619!2.90e-08!1;DOID:1357!2.90e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:3910;5.96e-34;2!DOID:3908;1.71e-14;5!DOID:1325;9.43e-11;7!DOID:3904;9.43e-11;7!DOID:3905;1.16e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,5.04e-34,2;DOID:3908,1.60e-14,5;DOID:1325,8.99e-11,7;DOID:3904,8.99e-11,7;DOID:3905,1.12e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0003127!3.78e-14!2;UBERON:0001764!2.90e-08!1;UBERON:0001825!2.90e-08!1;UBERON:0004913!4.11e-08!1;UBERON:0003703!4.11e-08!1;UBERON:0001174!4.11e-08!1;UBERON:0004914!4.11e-08!1;UBERON:0002372!1.21e-07!1;UBERON:0001961!1.21e-07!1;UBERON:0001744!1.21e-07!1;UBERON:0001735!1.21e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;5.96e-34;2!UBERON:0004903;5.96e-34;2!UBERON:0002173;5.96e-34;2!UBERON:0002186;5.96e-34;2!UBERON:0004821;3.66e-23;3!UBERON:0007499;3.66e-23;3!UBERON:0003215;3.66e-23;3!UBERON:0010368;3.66e-23;3!UBERON:0009911;3.66e-23;3!UBERON:0002299;3.66e-23;3!UBERON:0006524;3.66e-23;3!UBERON:0008874;3.66e-23;3!UBERON:0002169;3.66e-23;3!UBERON:0004894;3.66e-23;3!UBERON:0003296;9.45e-18;4!UBERON:0010133;9.45e-18;4!UBERON:0009856;9.45e-18;4!UBERON:0001894;9.43e-11;7!UBERON:0000058;6.34e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,5.04e-34,2;UBERON:0002173,5.04e-34,2;UBERON:0002186,5.04e-34,2;UBERON:0000007,7.05e-34,2;UBERON:0004821,3.27e-23,3;UBERON:0003215,3.27e-23,3;UBERON:0010368,3.27e-23,3;UBERON:0009911,3.27e-23,3;UBERON:0002299,3.27e-23,3;UBERON:0006524,3.27e-23,3;UBERON:0008874,3.27e-23,3;UBERON:0002169,3.27e-23,3;UBERON:0004894,3.27e-23,3;UBERON:0003296,1.03e-17,4;UBERON:0010133,1.03e-17,4;UBERON:0001894,9.89e-11,7;UBERON:0006222,9.89e-11,7 | |||
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|short_description=p@chr17:80594899..80594906,+ | |short_description=p@chr17:80594899..80594906,+ | ||
}} | }} |
Latest revision as of 23:09, 25 July 2015
Short description: | p@chr17:80594899..80594906, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:80594899..80594906, + |
Coexpression cluster: | C146_lymphangiectasia_lymphoma_gall_lymph_tonsil_gastric_transitionalcell |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 3.27e-23 | 3 |
epithelial cell of tracheobronchial tree | 1.12e-08 | 9 |
epithelial cell of lower respiratory tract | 1.12e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 5.04e-34 | 2 |
alveolar duct | 5.04e-34 | 2 |
bronchiole | 5.04e-34 | 2 |
pituitary gland | 7.05e-34 | 2 |
pulmonary alveolus epithelium | 3.27e-23 | 3 |
alveolus | 3.27e-23 | 3 |
pulmonary lobule | 3.27e-23 | 3 |
lobule | 3.27e-23 | 3 |
alveolus of lung | 3.27e-23 | 3 |
alveolar system | 3.27e-23 | 3 |
pulmonary acinus | 3.27e-23 | 3 |
alveolar sac | 3.27e-23 | 3 |
alveolar wall | 3.27e-23 | 3 |
gland of diencephalon | 1.03e-17 | 4 |
neuroendocrine gland | 1.03e-17 | 4 |
diencephalon | 9.89e-11 | 7 |
future diencephalon | 9.89e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 5.04e-34 | 2 |
non-small cell lung carcinoma | 1.60e-14 | 5 |
bronchus cancer | 8.99e-11 | 7 |
bronchogenic carcinoma | 8.99e-11 | 7 |
lung carcinoma | 1.12e-08 | 9 |