FFCP PHASE1:Hg19::chr17:80329732..80329753,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:80329732..80329753,+ | |||
|coexpression_cluster_id=C163 | |coexpression_cluster_id=C163 | ||
|description=CAGE_peak_at_chr17:80329732..80329753,+ | |description=CAGE_peak_at_chr17:80329732..80329753,+ | ||
|id=chr17:80329732..80329753,+ | |id=chr17:80329732..80329753,+ | ||
|ontology_enrichment_celltype=CL:0000188;1.57e-20;9!CL:0002575;2.02e-11;2!CL:0000632;5.18e-08;3!CL:0000594;5.93e-08;3!CL:0002586;7.50e-08;3 | |ontology_enrichment_celltype=CL:0000188!1.38e-36!9;CL:0000594!4.55e-16!3;CL:0000515!2.19e-12!4;CL:0000039!6.75e-12!7;CL:0000586!6.75e-12!7;CL:0000680!7.56e-11!57;CL:0000056!7.56e-11!57;CL:0000355!7.56e-11!57;CL:0002586!3.31e-08!3;CL:0000183!3.70e-07!59 | ||
| | |ontology_enrichment_celltype_v019=CL:0000188;1.57e-20;9!CL:0002575;2.02e-11;2!CL:0000632;5.18e-08;3!CL:0000594;5.93e-08;3!CL:0002586;7.50e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000188,1.52e-20,9;CL:0002575,2.02e-11,2;CL:0000632,5.18e-08,3;CL:0000594,6.34e-08,3;CL:0002586,7.26e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001134;3.02e-20;16!UBERON:0002036;3.02e-20;16!UBERON:0002385;1.51e-10;31!UBERON:0001015;1.51e-10;31!UBERON:0000383;1.51e-10;31!UBERON:0001781;7.50e-08;3!UBERON:0001782;7.50e-08;3 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!7.30e-14!61;UBERON:0002036!7.30e-14!61;UBERON:0003082!7.30e-14!61;UBERON:0002385!2.50e-13!63;UBERON:0001015!2.50e-13!63;UBERON:0000383!2.50e-13!63;UBERON:0004290!1.06e-11!70;UBERON:0003135!1.70e-11!11;UBERON:0000486!4.18e-11!82;UBERON:0000473!2.00e-10!8;UBERON:0000966!2.67e-10!5;UBERON:0005388!2.67e-10!5;UBERON:0001802!2.67e-10!5;UBERON:0000914!2.06e-09!83;UBERON:0002329!2.06e-09!83;UBERON:0003077!2.06e-09!83;UBERON:0003059!2.06e-09!83;UBERON:0007282!2.06e-09!83;UBERON:0009618!2.06e-09!83;UBERON:0007285!2.06e-09!83;UBERON:0001781!3.31e-08!3;UBERON:0001782!3.31e-08!3;UBERON:0005424!3.31e-08!3;UBERON:0000490!3.22e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;3.02e-20;16!UBERON:0002036;3.02e-20;16!UBERON:0002385;1.51e-10;31!UBERON:0001015;1.51e-10;31!UBERON:0000383;1.51e-10;31!UBERON:0001781;7.50e-08;3!UBERON:0001782;7.50e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,7.26e-08,3;UBERON:0005424,7.26e-08,3 | |||
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|short_description=p@chr17:80329732..80329753,+ | |short_description=p@chr17:80329732..80329753,+ | ||
}} | }} |
Latest revision as of 23:06, 25 July 2015
Short description: | p@chr17:80329732..80329753, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:80329732..80329753, + |
Coexpression cluster: | C163_Skeletal_skeletal_Pericytes_Hepatic_rhabdomyosarcoma_throat_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 1.52e-20 | 9 |
central nervous system pericyte | 2.02e-11 | 2 |
hepatic stellate cell | 5.18e-08 | 3 |
skeletal muscle satellite cell | 6.34e-08 | 3 |
retinal pigment epithelial cell | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 7.26e-08 | 3 |
presumptive retinal pigmented epithelium | 7.26e-08 | 3 |