FFCP PHASE1:Hg19::chr17:80274730..80274786,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:80274730..80274786,- | |||
|coexpression_cluster_id=C2445 | |||
|description=CAGE_peak_at_chr17:80274730..80274786,- | |description=CAGE_peak_at_chr17:80274730..80274786,- | ||
|id=chr17:80274730..80274786,- | |id=chr17:80274730..80274786,- | ||
|ontology_enrichment_celltype=CL:0000791!4.85e-20!18;CL:0000789!4.85e-20!18;CL:0002420!4.85e-20!18;CL:0002419!4.85e-20!18;CL:0000790!4.85e-20!18;CL:0000084!1.22e-19!25;CL:0000827!1.22e-19!25;CL:0002087!1.13e-14!119;CL:0000738!5.81e-14!140;CL:0000625!2.97e-13!11;CL:0000037!1.29e-11!172;CL:0000566!1.29e-11!172;CL:0002031!5.06e-11!124;CL:0000988!2.07e-10!182;CL:0002032!3.42e-10!165;CL:0000837!3.42e-10!165;CL:0002057!3.12e-09!42;CL:0000860!6.93e-09!45;CL:0000838!2.26e-08!52;CL:0000542!4.55e-08!53;CL:0000051!4.55e-08!53;CL:0000624!1.40e-07!6 | |ontology_enrichment_celltype=CL:0000791!4.85e-20!18;CL:0000789!4.85e-20!18;CL:0002420!4.85e-20!18;CL:0002419!4.85e-20!18;CL:0000790!4.85e-20!18;CL:0000084!1.22e-19!25;CL:0000827!1.22e-19!25;CL:0002087!1.13e-14!119;CL:0000738!5.81e-14!140;CL:0000625!2.97e-13!11;CL:0000037!1.29e-11!172;CL:0000566!1.29e-11!172;CL:0002031!5.06e-11!124;CL:0000988!2.07e-10!182;CL:0002032!3.42e-10!165;CL:0000837!3.42e-10!165;CL:0002057!3.12e-09!42;CL:0000860!6.93e-09!45;CL:0000838!2.26e-08!52;CL:0000542!4.55e-08!53;CL:0000051!4.55e-08!53;CL:0000624!1.40e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.95e-36;18!CL:0000789;3.95e-36;18!CL:0002419;3.95e-36;18!CL:0000084;3.83e-31;25!CL:0000625;2.12e-23;11!CL:0000624;8.69e-13;6!CL:0000542;9.10e-09;53!CL:0000623;2.19e-08;3!CL:0000226;1.30e-07;3!CL:0000842;1.30e-07;3!CL:0000898;6.19e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.29e-36,18;CL:0000789,4.29e-36,18;CL:0002420,4.29e-36,18;CL:0002419,4.29e-36,18;CL:0000790,4.29e-36,18;CL:0000084,3.89e-31,25;CL:0000827,3.89e-31,25;CL:0000625,2.25e-23,11;CL:0002087,7.76e-19,115;CL:0000738,2.39e-17,136;CL:0000838,5.09e-17,52;CL:0000542,1.42e-16,53;CL:0000051,1.42e-16,53;CL:0000037,1.51e-15,168;CL:0002031,3.40e-14,120;CL:0000988,3.82e-14,177;CL:0002032,7.29e-13,161;CL:0000837,7.29e-13,161;CL:0000624,8.62e-13,6;CL:0000623,2.24e-08,3;CL:0000825,2.24e-08,3;CL:0000226,1.41e-07,3;CL:0000842,1.41e-07,3;CL:0000898,5.70e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;3.95e-36;18!CL:0000051;9.10e-09;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.68e-11!102;UBERON:0003061!3.68e-11!102;UBERON:0000178!1.88e-10!15;UBERON:0000179!1.88e-10!15;UBERON:0000463!1.88e-10!15;UBERON:0002193!2.28e-10!112 | |ontology_enrichment_uberon=UBERON:0002390!3.68e-11!102;UBERON:0003061!3.68e-11!102;UBERON:0000178!1.88e-10!15;UBERON:0000179!1.88e-10!15;UBERON:0000463!1.88e-10!15;UBERON:0002193!2.28e-10!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.30e-19;15!UBERON:0000179;3.30e-19;15!UBERON:0000463;3.30e-19;15!UBERON:0002390;1.41e-12;32!UBERON:0002193;9.00e-08;42!UBERON:0004177;5.41e-07;5!UBERON:0005057;5.41e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.48e-19,15;UBERON:0000179,2.48e-19,15;UBERON:0000463,2.48e-19,15;UBERON:0002390,8.32e-13,98;UBERON:0003061,8.32e-13,98;UBERON:0002193,6.49e-12,108;UBERON:0004177,3.53e-10,7;UBERON:0005057,3.53e-10,7;UBERON:0002370,7.52e-09,4;UBERON:0005058,7.52e-09,4;UBERON:0009113,7.52e-09,4;UBERON:0003295,7.52e-09,4;UBERON:0005562,7.52e-09,4 | |||
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| ||
|short_description=p@chr17:80274730..80274786,- | |short_description=p@chr17:80274730..80274786,- | ||
}} | }} |
Latest revision as of 23:04, 25 July 2015
Short description: | p@chr17:80274730..80274786, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:80274730..80274786, - |
Coexpression cluster: | C2445_Mesenchymal_CD4_Natural_acute_thymus_CD8_hepatocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.29e-36 | 18 |
alpha-beta T cell | 4.29e-36 | 18 |
immature T cell | 4.29e-36 | 18 |
mature T cell | 4.29e-36 | 18 |
immature alpha-beta T cell | 4.29e-36 | 18 |
T cell | 3.89e-31 | 25 |
pro-T cell | 3.89e-31 | 25 |
CD8-positive, alpha-beta T cell | 2.25e-23 | 11 |
nongranular leukocyte | 7.76e-19 | 115 |
leukocyte | 2.39e-17 | 136 |
lymphoid lineage restricted progenitor cell | 5.09e-17 | 52 |
lymphocyte | 1.42e-16 | 53 |
common lymphoid progenitor | 1.42e-16 | 53 |
hematopoietic stem cell | 1.51e-15 | 168 |
hematopoietic lineage restricted progenitor cell | 3.40e-14 | 120 |
hematopoietic cell | 3.82e-14 | 177 |
hematopoietic oligopotent progenitor cell | 7.29e-13 | 161 |
hematopoietic multipotent progenitor cell | 7.29e-13 | 161 |
CD4-positive, alpha-beta T cell | 8.62e-13 | 6 |
natural killer cell | 2.24e-08 | 3 |
pro-NK cell | 2.24e-08 | 3 |
single nucleate cell | 1.41e-07 | 3 |
mononuclear cell | 1.41e-07 | 3 |
naive T cell | 5.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 2.48e-19 | 15 |
haemolymphatic fluid | 2.48e-19 | 15 |
organism substance | 2.48e-19 | 15 |
hematopoietic system | 8.32e-13 | 98 |
blood island | 8.32e-13 | 98 |
hemolymphoid system | 6.49e-12 | 108 |
hemopoietic organ | 3.53e-10 | 7 |
immune organ | 3.53e-10 | 7 |
thymus | 7.52e-09 | 4 |
hemolymphoid system gland | 7.52e-09 | 4 |
thymic region | 7.52e-09 | 4 |
pharyngeal gland | 7.52e-09 | 4 |
thymus primordium | 7.52e-09 | 4 |