FFCP PHASE1:Hg19::chr17:73871841..73871861,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:73871841..73871861,- | |||
|description=CAGE_peak_at_chr17:73871841..73871861,- | |description=CAGE_peak_at_chr17:73871841..73871861,- | ||
|id=chr17:73871841..73871861,- | |id=chr17:73871841..73871861,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000650;2.74e-12;2!CL:1000500;2.74e-12;2!CL:1000618;2.74e-12;2!CL:1001318;2.74e-12;2!CL:0002173;2.74e-12;2!CL:0000322;1.26e-08;3!CL:0002586;1.26e-08;3!CL:0000669;8.85e-07;4!CL:0000149;8.85e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,3.62e-12,2;CL:1000500,3.62e-12,2;CL:1000618,3.62e-12,2;CL:1001318,3.62e-12,2;CL:0002173,3.62e-12,2;CL:0002586,1.21e-08,3;CL:0000322,1.40e-08,3;CL:0000149,8.61e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.49e-23;1!UBERON:0006242;3.67e-23;1 | |||
|ontology_enrichment_disease=DOID:305!8.50e-10!106 | |||
|ontology_enrichment_disease_v019=DOID:4468;1.75e-12;2!DOID:3910;2.74e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.65e-12,2;DOID:3910,3.24e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0005743!4.79e-14!86;UBERON:0001017!6.72e-12!82;UBERON:0000073!7.76e-12!94;UBERON:0001016!7.76e-12!94;UBERON:0007023!1.11e-11!115;UBERON:0000955!5.19e-10!69;UBERON:0006238!5.19e-10!69;UBERON:0001049!2.00e-09!57;UBERON:0005068!2.00e-09!57;UBERON:0006241!2.00e-09!57;UBERON:0007135!2.00e-09!57;UBERON:0003075!1.34e-08!86;UBERON:0007284!1.34e-08!86;UBERON:0002020!5.43e-08!34;UBERON:0003528!5.43e-08!34;UBERON:0002294!6.33e-08!7;UBERON:0001173!6.33e-08!7;UBERON:0004912!6.33e-08!7;UBERON:0002346!6.71e-08!90;UBERON:0000033!9.53e-08!123;UBERON:0004121!3.12e-07!169;UBERON:0002791!4.26e-07!33;UBERON:0002616!5.11e-07!59;UBERON:0000062!5.31e-07!511;UBERON:0000153!5.33e-07!129;UBERON:0007811!5.33e-07!129;UBERON:0000924!7.75e-07!173;UBERON:0006601!7.75e-07!173;UBERON:0002780!7.78e-07!41;UBERON:0001890!7.78e-07!41;UBERON:0006240!7.78e-07!41;UBERON:0001893!8.52e-07!34 | |ontology_enrichment_uberon=UBERON:0005743!4.79e-14!86;UBERON:0001017!6.72e-12!82;UBERON:0000073!7.76e-12!94;UBERON:0001016!7.76e-12!94;UBERON:0007023!1.11e-11!115;UBERON:0000955!5.19e-10!69;UBERON:0006238!5.19e-10!69;UBERON:0001049!2.00e-09!57;UBERON:0005068!2.00e-09!57;UBERON:0006241!2.00e-09!57;UBERON:0007135!2.00e-09!57;UBERON:0003075!1.34e-08!86;UBERON:0007284!1.34e-08!86;UBERON:0002020!5.43e-08!34;UBERON:0003528!5.43e-08!34;UBERON:0002294!6.33e-08!7;UBERON:0001173!6.33e-08!7;UBERON:0004912!6.33e-08!7;UBERON:0002346!6.71e-08!90;UBERON:0000033!9.53e-08!123;UBERON:0004121!3.12e-07!169;UBERON:0002791!4.26e-07!33;UBERON:0002616!5.11e-07!59;UBERON:0000062!5.31e-07!511;UBERON:0000153!5.33e-07!129;UBERON:0007811!5.33e-07!129;UBERON:0000924!7.75e-07!173;UBERON:0006601!7.75e-07!173;UBERON:0002780!7.78e-07!41;UBERON:0001890!7.78e-07!41;UBERON:0006240!7.78e-07!41;UBERON:0001893!8.52e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.74e-12;2!UBERON:0003567;2.74e-12;2!UBERON:0003838;2.74e-12;2!UBERON:0003586;2.74e-12;2!UBERON:0005169;2.74e-12;2!UBERON:0002321;2.74e-12;2!UBERON:0005215;2.74e-12;2!UBERON:0002303;2.74e-12;2!UBERON:0002319;2.74e-12;2!UBERON:0002173;2.74e-12;2!UBERON:0002186;2.74e-12;2!UBERON:0002110;1.26e-08;3!UBERON:0004821;1.26e-08;3!UBERON:0007499;1.26e-08;3!UBERON:0001781;1.26e-08;3!UBERON:0003215;1.26e-08;3!UBERON:0010368;1.26e-08;3!UBERON:0009911;1.26e-08;3!UBERON:0002299;1.26e-08;3!UBERON:0001782;1.26e-08;3!UBERON:0006524;1.26e-08;3!UBERON:0008874;1.26e-08;3!UBERON:0002169;1.26e-08;3!UBERON:0004894;1.26e-08;3!UBERON:0003891;8.85e-07;4!UBERON:0009856;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,3.24e-12,2;UBERON:0002173,3.24e-12,2;UBERON:0002186,3.24e-12,2;UBERON:0003567,3.62e-12,2;UBERON:0003838,3.62e-12,2;UBERON:0003586,3.62e-12,2;UBERON:0005169,3.62e-12,2;UBERON:0002321,3.62e-12,2;UBERON:0005215,3.62e-12,2;UBERON:0002303,3.62e-12,2;UBERON:0002319,3.62e-12,2;UBERON:0002110,1.12e-08,3;UBERON:0006242,1.12e-08,3;UBERON:0001782,1.21e-08,3;UBERON:0005424,1.21e-08,3;UBERON:0004821,1.40e-08,3;UBERON:0003215,1.40e-08,3;UBERON:0010368,1.40e-08,3;UBERON:0009911,1.40e-08,3;UBERON:0002299,1.40e-08,3;UBERON:0006524,1.40e-08,3;UBERON:0008874,1.40e-08,3;UBERON:0002169,1.40e-08,3;UBERON:0004894,1.40e-08,3;UBERON:0001781,8.61e-07,4 | |||
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| ||
|short_description=p@chr17:73871841..73871861,- | |short_description=p@chr17:73871841..73871861,- | ||
}} | }} |
Latest revision as of 21:16, 25 July 2015
Short description: | p@chr17:73871841..73871861, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:73871841..73871861, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 3.62e-12 | 2 |
kidney interstitial cell | 3.62e-12 | 2 |
juxtaglomerular complex cell | 3.62e-12 | 2 |
renal interstitial pericyte | 3.62e-12 | 2 |
extraglomerular mesangial cell | 3.62e-12 | 2 |
retinal pigment epithelial cell | 1.21e-08 | 3 |
pneumocyte | 1.40e-08 | 3 |
visual pigment cell | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 3.24e-12 | 2 |
alveolar duct | 3.24e-12 | 2 |
bronchiole | 3.24e-12 | 2 |
abdomen connective tissue | 3.62e-12 | 2 |
abdominal segment connective tissue | 3.62e-12 | 2 |
trunk connective tissue | 3.62e-12 | 2 |
interstitial tissue | 3.62e-12 | 2 |
extraglomerular mesangium | 3.62e-12 | 2 |
kidney interstitium | 3.62e-12 | 2 |
juxtaglomerular apparatus | 3.62e-12 | 2 |
mesangium | 3.62e-12 | 2 |
gallbladder | 1.12e-08 | 3 |
gall bladder primordium | 1.12e-08 | 3 |
pigmented layer of retina | 1.21e-08 | 3 |
presumptive retinal pigmented epithelium | 1.21e-08 | 3 |
pulmonary alveolus epithelium | 1.40e-08 | 3 |
alveolus | 1.40e-08 | 3 |
pulmonary lobule | 1.40e-08 | 3 |
lobule | 1.40e-08 | 3 |
alveolus of lung | 1.40e-08 | 3 |
alveolar system | 1.40e-08 | 3 |
pulmonary acinus | 1.40e-08 | 3 |
alveolar sac | 1.40e-08 | 3 |
alveolar wall | 1.40e-08 | 3 |
layer of retina | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.65e-12 | 2 |
lung adenocarcinoma | 3.24e-12 | 2 |