FFCP PHASE1:Hg19::chr17:73554365..73554374,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:73554365..73554374,+ | |||
|coexpression_cluster_id=C117 | |coexpression_cluster_id=C117 | ||
|description=CAGE_peak_at_chr17:73554365..73554374,+ | |description=CAGE_peak_at_chr17:73554365..73554374,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000313!2.63e-12!1;CL:0000159!8.93e-07!2 | |ontology_enrichment_celltype=CL:0000313!2.63e-12!1;CL:0000159!8.93e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000313;9.37e-99;1!CL:0000159;2.74e-50;2 | |ontology_enrichment_celltype_v019=CL:0000313;9.37e-99;1!CL:0000159;2.74e-50;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000313,9.37e-99,1;CL:0000159,2.74e-50,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.52e-50;2!UBERON:0009117;2.73e-11;10!UBERON:0005564;2.73e-11;10 | |ontology_enrichment_development_v019=UBERON:0007297;4.52e-50;2!UBERON:0009117;2.73e-11;10!UBERON:0005564;2.73e-11;10 | ||
|ontology_enrichment_disease=DOID:5093!1.64e-24!4;DOID:1612!1.64e-24!4;DOID:2152!2.63e-12!1;DOID:305!1.66e-10!106;DOID:0050687!2.29e-07!143;DOID:299!4.62e-07!25 | |ontology_enrichment_disease=DOID:5093!1.64e-24!4;DOID:1612!1.64e-24!4;DOID:2152!2.63e-12!1;DOID:305!1.66e-10!106;DOID:0050687!2.29e-07!143;DOID:299!4.62e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:2152;9.37e-99;1!DOID:2394;1.86e-08;14 | |ontology_enrichment_disease_v019=DOID:2152;9.37e-99;1!DOID:2394;1.86e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2152,9.37e-99,1;DOID:2394,1.86e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001737!7.27e-42!9;UBERON:0001557!1.07e-19!19;UBERON:0006947!2.80e-15!3;UBERON:0004054!2.80e-15!3;UBERON:0004911!2.63e-12!1;UBERON:0001301!2.93e-12!1;UBERON:0001000!6.26e-12!1;UBERON:0005352!6.26e-12!1;UBERON:0005904!1.07e-11!4;UBERON:0000310!3.63e-10!10;UBERON:0008947!1.16e-09!38;UBERON:0003258!1.16e-09!38;UBERON:0001443!2.74e-09!11;UBERON:0000072!6.60e-08!46;UBERON:0000065!8.36e-07!53;UBERON:0004909!8.93e-07!2 | |ontology_enrichment_uberon=UBERON:0001737!7.27e-42!9;UBERON:0001557!1.07e-19!19;UBERON:0006947!2.80e-15!3;UBERON:0004054!2.80e-15!3;UBERON:0004911!2.63e-12!1;UBERON:0001301!2.93e-12!1;UBERON:0001000!6.26e-12!1;UBERON:0005352!6.26e-12!1;UBERON:0005904!1.07e-11!4;UBERON:0000310!3.63e-10!10;UBERON:0008947!1.16e-09!38;UBERON:0003258!1.16e-09!38;UBERON:0001443!2.74e-09!11;UBERON:0000072!6.60e-08!46;UBERON:0000065!8.36e-07!53;UBERON:0004909!8.93e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0004911;9.37e-99;1!UBERON:0001301;2.55e-98;1!UBERON:0004909;2.74e-50;2!UBERON:0006947;5.96e-34;3!UBERON:0004054;5.96e-34;3!UBERON:0005904;7.14e-26;4!UBERON:0000058;3.02e-11;10!UBERON:0003135;2.37e-10;11!UBERON:0000992;5.28e-09;13!UBERON:0003133;3.54e-08;44 | |ontology_enrichment_uberon_v019=UBERON:0004911;9.37e-99;1!UBERON:0001301;2.55e-98;1!UBERON:0004909;2.74e-50;2!UBERON:0006947;5.96e-34;3!UBERON:0004054;5.96e-34;3!UBERON:0005904;7.14e-26;4!UBERON:0000058;3.02e-11;10!UBERON:0003135;2.37e-10;11!UBERON:0000992;5.28e-09;13!UBERON:0003133;3.54e-08;44 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,9.37e-99,1;UBERON:0001301,2.55e-98,1;UBERON:0004909,2.74e-50,2;UBERON:0006947,5.96e-34,3;UBERON:0004054,5.96e-34,3;UBERON:0005904,7.14e-26,4;UBERON:0005103,1.07e-13,8;UBERON:0000083,1.07e-13,8;UBERON:0009201,1.07e-13,8;UBERON:0006553,1.07e-13,8;UBERON:0003074,1.07e-13,8;UBERON:0003060,1.07e-13,8;UBERON:0000080,2.45e-12,9;UBERON:0002120,2.45e-12,9;UBERON:0004875,2.45e-12,9;UBERON:0005721,2.45e-12,9;UBERON:0005754,2.45e-12,9;UBERON:0007297,2.45e-12,9;UBERON:0003135,2.37e-10,11;UBERON:0004876,2.37e-10,11;UBERON:0003887,1.33e-09,12;UBERON:0003133,1.62e-09,48;UBERON:0000992,5.28e-09,13;UBERON:0003886,1.34e-08,54;UBERON:0005156,5.66e-08,59;UBERON:0000990,5.66e-08,59;UBERON:0002553,9.44e-08,61;UBERON:0006555,1.54e-07,16;UBERON:0004819,1.54e-07,16 | |||
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|short_description=p@chr17:73554365..73554374,+ | |short_description=p@chr17:73554365..73554374,+ | ||
}} | }} |
Latest revision as of 21:08, 25 July 2015
Short description: | p@chr17:73554365..73554374, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:73554365..73554374, + |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 9.37e-99 | 1 |
seromucus secreting cell | 2.74e-50 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 9.37e-99 | 1 |
epididymis | 2.55e-98 | 1 |
epithelium of gonad | 2.74e-50 | 2 |
male genital duct | 5.96e-34 | 3 |
internal male genitalia | 5.96e-34 | 3 |
duct of male reproductive system | 7.14e-26 | 4 |
mesonephric epithelium | 1.07e-13 | 8 |
mesonephric tubule | 1.07e-13 | 8 |
nephric duct | 1.07e-13 | 8 |
renal duct | 1.07e-13 | 8 |
mesonephric duct | 1.07e-13 | 8 |
pronephric duct | 1.07e-13 | 8 |
mesonephros | 2.45e-12 | 9 |
pronephros | 2.45e-12 | 9 |
nephrogenic cord | 2.45e-12 | 9 |
pronephric mesoderm | 2.45e-12 | 9 |
rostral part of nephrogenic cord | 2.45e-12 | 9 |
presumptive pronephric mesoderm | 2.45e-12 | 9 |
male reproductive organ | 2.37e-10 | 11 |
urogenital ridge | 2.37e-10 | 11 |
intraembryonic coelom | 1.33e-09 | 12 |
reproductive organ | 1.62e-09 | 48 |
female gonad | 5.28e-09 | 13 |
body cavity precursor | 1.34e-08 | 54 |
reproductive structure | 5.66e-08 | 59 |
reproductive system | 5.66e-08 | 59 |
anatomical cavity | 9.44e-08 | 61 |
excretory tube | 1.54e-07 | 16 |
kidney epithelium | 1.54e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 9.37e-99 | 1 |
ovarian cancer | 1.86e-08 | 14 |