FFCP PHASE1:Hg19::chr17:70376853..70376857,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:70376853..70376857,- | |||
|description=CAGE_peak_at_chr17:70376853..70376857,- | |description=CAGE_peak_at_chr17:70376853..70376857,- | ||
|id=chr17:70376853..70376857,- | |id=chr17:70376853..70376857,- | ||
|ontology_enrichment_celltype=CL:0000223!3.19e-09!59;CL:0000066!4.93e-09!254 | |ontology_enrichment_celltype=CL:0000223!3.19e-09!59;CL:0000066!4.93e-09!254 | ||
|ontology_enrichment_celltype_v019=CL:0000322;8.99e-11;3!CL:0002178;8.99e-11;3!CL:0002076;7.28e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,7.42e-11,3;CL:0000322,1.20e-10,3;CL:0002076,9.81e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.65e-20!106;DOID:0050687!4.72e-18!143;DOID:1749!2.45e-10!14;DOID:14566!6.27e-10!239;DOID:162!6.38e-10!235;DOID:299!1.80e-08!25 | |ontology_enrichment_disease=DOID:305!3.65e-20!106;DOID:0050687!4.72e-18!143;DOID:1749!2.45e-10!14;DOID:14566!6.27e-10!239;DOID:162!6.38e-10!235;DOID:299!1.80e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:3119;6.88e-19;14!DOID:3910;1.78e-15;2!DOID:4929;1.78e-15;2!DOID:3493;1.78e-15;2!DOID:3908;5.70e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,5.39e-19,14;DOID:3493,1.33e-15,2;DOID:4929,2.05e-15,2;DOID:3910,2.74e-15,2;DOID:305,5.56e-07,106;DOID:3908,6.77e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002108!8.27e-11!14;UBERON:0002114!1.37e-10!12;UBERON:0001264!1.49e-08!10;UBERON:0003922!1.49e-08!10;UBERON:0003923!1.49e-08!10;UBERON:0003924!1.49e-08!10;UBERON:0003921!1.49e-08!10;UBERON:0004119!2.82e-08!169;UBERON:0000925!2.82e-08!169;UBERON:0006595!2.82e-08!169;UBERON:0002075!4.80e-08!18;UBERON:0001045!1.20e-07!11;UBERON:0004921!1.83e-07!129;UBERON:0004185!1.83e-07!129;UBERON:0001007!1.89e-07!155;UBERON:0001555!1.89e-07!155;UBERON:0007026!1.89e-07!155;UBERON:0000033!2.52e-07!123;UBERON:0003343!2.90e-07!4;UBERON:0004785!2.90e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;1.78e-29;1!UBERON:0003703;1.78e-29;1!UBERON:0001174;1.78e-29;1!UBERON:0004914;1.78e-29;1!UBERON:0004903;1.78e-15;2!UBERON:0002173;1.78e-15;2!UBERON:0002186;1.78e-15;2!UBERON:0000058;2.51e-12;10!UBERON:0004821;8.99e-11;3!UBERON:0007499;8.99e-11;3!UBERON:0003215;8.99e-11;3!UBERON:0010368;8.99e-11;3!UBERON:0009911;8.99e-11;3!UBERON:0002299;8.99e-11;3!UBERON:0002114;8.99e-11;2!UBERON:0006524;8.99e-11;3!UBERON:0008874;8.99e-11;3!UBERON:0002169;8.99e-11;3!UBERON:0004894;8.99e-11;3!UBERON:0003343;2.11e-08;4!UBERON:0002394;2.11e-08;4!UBERON:0004785;2.11e-08;4!UBERON:0003928;2.11e-08;4!UBERON:0009856;2.11e-08;4!UBERON:0002108;5.70e-07;4!UBERON:0000945;5.70e-07;5!UBERON:0010039;5.70e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,2.37e-29,1;UBERON:0003703,2.37e-29,1;UBERON:0001174,2.37e-29,1;UBERON:0004914,2.37e-29,1;UBERON:0004903,2.74e-15,2;UBERON:0002173,2.74e-15,2;UBERON:0002186,2.74e-15,2;UBERON:0002114,9.90e-11,2;UBERON:0004821,1.20e-10,3;UBERON:0003215,1.20e-10,3;UBERON:0010368,1.20e-10,3;UBERON:0009911,1.20e-10,3;UBERON:0002299,1.20e-10,3;UBERON:0006524,1.20e-10,3;UBERON:0008874,1.20e-10,3;UBERON:0002169,1.20e-10,3;UBERON:0004894,1.20e-10,3;UBERON:0003343,2.43e-08,4;UBERON:0004785,2.43e-08,4;UBERON:0002108,6.04e-07,4;UBERON:0000058,6.97e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.283604451492204,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0.179117045405697,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0,0,0.576570202095319,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0.755798243562828,0.409074730008619,0,0,0.359473404589307,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.227586896570999,1.01701460117107,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0.557694977114413,0,0.113942055847001,0.46112780877612,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0.586993856796269,0.242780379534093,0,1.20990716048664,0,0,0,0,0.664653872707185,0.330991955875499,0.313932918407225,1.19472429772959,0,0,0.520679215005393,0.195984794828755,0.0870592065804026,0,0,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0.0801588202515337,0,0.19980960958213,0,0,0.514784993585894,0,0,0.471388069233591,0,0,0.101998217636322,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.247247575143499,0.0674035438541849,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0.316801009558219,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0.342173675768659,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0,0.0620964029413835,0,0.124980407962107,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0.138258436151731,0,0,0,0.327609848846413,0.737318726261158,0.211312123358627,0,0,0,0,0,0,0,0,0.215649622793364,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0.161475645631851,0,1.07962490351128,0.235939446695481,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0,1.18284868973636,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.0657727735628491,0.118193840883968,0.556157009460346,0,0,0,0,0,0,0.0714765441766563,0,0.697448552208751,0,0,0,0,0,0.860454717640555,0,0.0852134047591577,0,0,0.31020638566432,0,0.782988022584546,1.47225350422864,0.609589624911347,0,0,0,0,0,1.59160620129095,0,0,0,0.452888530700021,0.154348316215889,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0.357107877211315,0,0.160482733378337,0,0,0.143339583151451,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0.332660356546013,0.325613074443898,0,0,0.269475606319761,0,0,0,0,0,0 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| ||
|short_description=p@chr17:70376853..70376857,- | |short_description=p@chr17:70376853..70376857,- | ||
}} | }} |
Latest revision as of 20:33, 25 July 2015
Short description: | p@chr17:70376853..70376857, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:70376853..70376857, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 7.42e-11 | 3 |
pneumocyte | 1.20e-10 | 3 |
endo-epithelial cell | 9.81e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 2.37e-29 | 1 |
extrahepatic bile duct | 2.37e-29 | 1 |
common bile duct | 2.37e-29 | 1 |
duodenal papilla | 2.37e-29 | 1 |
bronchoalveolar duct junction | 2.74e-15 | 2 |
alveolar duct | 2.74e-15 | 2 |
bronchiole | 2.74e-15 | 2 |
duodenum | 9.90e-11 | 2 |
pulmonary alveolus epithelium | 1.20e-10 | 3 |
alveolus | 1.20e-10 | 3 |
pulmonary lobule | 1.20e-10 | 3 |
lobule | 1.20e-10 | 3 |
alveolus of lung | 1.20e-10 | 3 |
alveolar system | 1.20e-10 | 3 |
pulmonary acinus | 1.20e-10 | 3 |
alveolar sac | 1.20e-10 | 3 |
alveolar wall | 1.20e-10 | 3 |
mucosa of oral region | 2.43e-08 | 4 |
respiratory system mucosa | 2.43e-08 | 4 |
small intestine | 6.04e-07 | 4 |
duct | 6.97e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 5.39e-19 | 14 |
signet ring cell adenocarcinoma | 1.33e-15 | 2 |
tubular adenocarcinoma | 2.05e-15 | 2 |
lung adenocarcinoma | 2.74e-15 | 2 |
carcinoma | 5.56e-07 | 106 |
non-small cell lung carcinoma | 6.77e-07 | 5 |